BLASTX nr result

ID: Glycyrrhiza23_contig00004242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004242
         (2993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528012.1| PREDICTED: RING finger and transmembrane dom...   549   e-153
ref|XP_003523294.1| PREDICTED: RING finger and transmembrane dom...   537   e-150
ref|XP_003615464.1| E3 ubiquitin-protein ligase synoviolin B [Me...   488   e-135
ref|XP_003552333.1| PREDICTED: RING finger and transmembrane dom...   469   e-129
ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|2...   469   e-129

>ref|XP_003528012.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 473

 Score =  549 bits (1414), Expect = e-153
 Identities = 289/441 (65%), Positives = 311/441 (70%), Gaps = 7/441 (1%)
 Frame = +3

Query: 1542 EPVTMIPQPRTRPRFRXXXXXXXXXXXXXXXX-------EVAIRIXXXXXXXXXXXXXXA 1700
            EPV +IP  RTRPRF+                       EVAIRI              +
Sbjct: 56   EPVIIIP--RTRPRFQAHAESASASSSDSDENACNGAAEEVAIRIIGAGEQESGSSPSSS 113

Query: 1701 FRNRAGELNFHEVISGGRGGTLSEEARRAIANERVPLVSLADVVGGGXXXXXXXXXXXXX 1880
             R R GE    E + G R G LS EARR +A ERVPLVSL D +GG              
Sbjct: 114  SRGRGGEPGCEEAVVG-RSGMLSSEARRRMAEERVPLVSLDDGIGG-------------- 158

Query: 1881 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAKWVEQILPFSXXXXXXXIRQHLQG 2060
                                              +AKW+EQILPFS       IRQHLQG
Sbjct: 159  ------VRESSSSSSSSSSSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQG 212

Query: 2061 FVVTICISALMFKSNEIIKKQTALKGDREVSVLLGFSFGFMLYVICIYWWYRNDDLFYPL 2240
            F VTICISA+MFKSNEI+KKQTALKGDR+VSVLLG SF F+L+VI IYWWY+NDDL YPL
Sbjct: 213  FFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLGISFAFVLHVISIYWWYQNDDLLYPL 272

Query: 2241 AMIPPKETQPFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKNSRGHNFRRQGQMLTLVEY 2420
            AM+PPK   PFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKN RGHNFRRQGQMLTL+EY
Sbjct: 273  AMLPPKTPPPFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKNGRGHNFRRQGQMLTLIEY 332

Query: 2421 TVLLYRAFLPTPVWYRFFFNKDYGSLFSSLTTGLYLTFKLTSVVEKAQCFICALKALSKK 2600
            T+LLYRA LPTPVWYRFF NKDYGSLFSSLTTGLYLTFKLTSVVEK QCF+ ALKALSKK
Sbjct: 333  TLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQCFVSALKALSKK 392

Query: 2601 EILYGVYATTEQVRAAGDLCAICQEKMHSPVFLCCKHMFCEECVSEWFERERTCPLCRAL 2780
            E+ YGVYATTEQV AAGDLCAICQEKM +P+ L CKHMFCEECVSEWFERERTCPLCRAL
Sbjct: 393  EVHYGVYATTEQVNAAGDLCAICQEKMQAPILLSCKHMFCEECVSEWFERERTCPLCRAL 452

Query: 2781 VKPADMRTFGDGSTSLFFQLF 2843
            VKPAD+RTFGDGSTSLFFQLF
Sbjct: 453  VKPADLRTFGDGSTSLFFQLF 473


>ref|XP_003523294.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 464

 Score =  537 bits (1383), Expect = e-150
 Identities = 288/441 (65%), Positives = 310/441 (70%), Gaps = 7/441 (1%)
 Frame = +3

Query: 1542 EPVTMIPQPRTRPRFRXXXXXXXXXXXXXXXX-------EVAIRIXXXXXXXXXXXXXXA 1700
            EPV +IP  RTRPRF+                       EVAIRI              +
Sbjct: 58   EPVIIIP--RTRPRFQAHAESDAASASDSDENACNGAAEEVAIRIIGVGEQESGSSPSSS 115

Query: 1701 FRNRAGELNFHEVISGGRGGTLSEEARRAIANERVPLVSLADVVGGGXXXXXXXXXXXXX 1880
             R R GEL   E + G R G LS  +RR +A ERVPLVSL D + G              
Sbjct: 116  -RGRGGELGGEEAVVG-RSGMLS--SRRRMAEERVPLVSLDDGIVGARDSSSSSSSSTYQ 171

Query: 1881 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAKWVEQILPFSXXXXXXXIRQHLQG 2060
                                              +AKW+EQILPFS       IRQHLQG
Sbjct: 172  RYDIQQ----------------------------VAKWIEQILPFSLLLLIVFIRQHLQG 203

Query: 2061 FVVTICISALMFKSNEIIKKQTALKGDREVSVLLGFSFGFMLYVICIYWWYRNDDLFYPL 2240
            F VTICISA+MFKSNEI+KKQTALKGDR+VSVLLG SF FML+VI IYWWYRNDDL YPL
Sbjct: 204  FFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLGISFAFMLHVISIYWWYRNDDLLYPL 263

Query: 2241 AMIPPKETQPFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKNSRGHNFRRQGQMLTLVEY 2420
            AM+PPK   PFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKN RGHNFRRQGQMLTLVEY
Sbjct: 264  AMLPPKTPPPFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKNGRGHNFRRQGQMLTLVEY 323

Query: 2421 TVLLYRAFLPTPVWYRFFFNKDYGSLFSSLTTGLYLTFKLTSVVEKAQCFICALKALSKK 2600
            T+LLYRA LPTPVWYRFF NKDYGSLFSSLTTGLYLTFKLTSVVEK QCF+ ALKALSKK
Sbjct: 324  TLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQCFVSALKALSKK 383

Query: 2601 EILYGVYATTEQVRAAGDLCAICQEKMHSPVFLCCKHMFCEECVSEWFERERTCPLCRAL 2780
            E+ YGV+ATTEQV AAGD+CAICQEKM +P+ L CKHMFCEECVSEWFERERTCPLCRAL
Sbjct: 384  EVHYGVHATTEQVNAAGDMCAICQEKMQAPILLSCKHMFCEECVSEWFERERTCPLCRAL 443

Query: 2781 VKPADMRTFGDGSTSLFFQLF 2843
            VKPAD+RTFGDGSTSLFFQLF
Sbjct: 444  VKPADLRTFGDGSTSLFFQLF 464


>ref|XP_003615464.1| E3 ubiquitin-protein ligase synoviolin B [Medicago truncatula]
            gi|355516799|gb|AES98422.1| E3 ubiquitin-protein ligase
            synoviolin B [Medicago truncatula]
          Length = 481

 Score =  488 bits (1255), Expect = e-135
 Identities = 230/287 (80%), Positives = 254/287 (88%)
 Frame = +3

Query: 1983 IAKWVEQILPFSXXXXXXXIRQHLQGFVVTICISALMFKSNEIIKKQTALKGDREVSVLL 2162
            +AKW+EQILPFS       IRQHLQGF VTI I+A+MFKSNEI+KKQTALKGDR+VS+L 
Sbjct: 196  VAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNEIVKKQTALKGDRKVSLLA 255

Query: 2163 GFSFGFMLYVICIYWWYRNDDLFYPLAMIPPKETQPFWHTIFIILVNDTLVRQAAMAFKC 2342
            G +F F+L+VICIYWWYRNDD+ YPLAM+PP  T PFWH IF ILVND L+RQ AMAFKC
Sbjct: 256  GIAFAFILHVICIYWWYRNDDILYPLAMLPPNPT-PFWHAIFTILVNDILMRQVAMAFKC 314

Query: 2343 LLLIYYKNSRGHNFRRQGQMLTLVEYTVLLYRAFLPTPVWYRFFFNKDYGSLFSSLTTGL 2522
            +LLIYYK  +GHNFRRQ QMLTLVEYT+LLYRA LPTPVWYRFF N++YGSLFSSLTTGL
Sbjct: 315  ILLIYYKKGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNREYGSLFSSLTTGL 374

Query: 2523 YLTFKLTSVVEKAQCFICALKALSKKEILYGVYATTEQVRAAGDLCAICQEKMHSPVFLC 2702
            YLTFKLTSVVEK QCFI ALKALS+KE+ YGVYAT EQV AAGDLCAICQEKMHSP+ L 
Sbjct: 375  YLTFKLTSVVEKVQCFISALKALSRKEVHYGVYATAEQVTAAGDLCAICQEKMHSPILLR 434

Query: 2703 CKHMFCEECVSEWFERERTCPLCRALVKPADMRTFGDGSTSLFFQLF 2843
            CKH+FCE+CVSEWFERERTCPLCRALVK AD+RTFGDGSTSLFFQLF
Sbjct: 435  CKHIFCEDCVSEWFERERTCPLCRALVKAADLRTFGDGSTSLFFQLF 481


>ref|XP_003552333.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 440

 Score =  469 bits (1208), Expect = e-129
 Identities = 216/286 (75%), Positives = 252/286 (88%)
 Frame = +3

Query: 1986 AKWVEQILPFSXXXXXXXIRQHLQGFVVTICISALMFKSNEIIKKQTALKGDREVSVLLG 2165
            A+W+EQ+LPFS       IRQHLQGF VTI I+A++FKSN+I++KQTALKG+R++ VL+G
Sbjct: 155  ARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKMLVLVG 214

Query: 2166 FSFGFMLYVICIYWWYRNDDLFYPLAMIPPKETQPFWHTIFIILVNDTLVRQAAMAFKCL 2345
             S GF L+V+ +YWWY+NDDL YPL M+PPK+  PFWH IFII+VNDTLVRQAAM FKC+
Sbjct: 215  ISVGFALHVVGVYWWYQNDDLMYPLIMLPPKDIPPFWHAIFIIMVNDTLVRQAAMVFKCI 274

Query: 2346 LLIYYKNSRGHNFRRQGQMLTLVEYTVLLYRAFLPTPVWYRFFFNKDYGSLFSSLTTGLY 2525
            LL+YYKNSRG N+R+QGQMLTLVEY +LLYRA LPTPVWYRFF NK+YGSLFSSL TGLY
Sbjct: 275  LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLY 334

Query: 2526 LTFKLTSVVEKAQCFICALKALSKKEILYGVYATTEQVRAAGDLCAICQEKMHSPVFLCC 2705
            LTFKLTSVVEK Q F  A+KALS+KE+ YG YAT+EQV AAGDLCAICQEKMH+P+ L C
Sbjct: 335  LTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATSEQVNAAGDLCAICQEKMHAPILLRC 394

Query: 2706 KHMFCEECVSEWFERERTCPLCRALVKPADMRTFGDGSTSLFFQLF 2843
            KH+FCE+CVSEWFERERTCPLCRALVKPAD+R+FGDGSTSLFFQLF
Sbjct: 395  KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 440


>ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|222867732|gb|EEF04863.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  469 bits (1208), Expect = e-129
 Identities = 215/287 (74%), Positives = 250/287 (87%)
 Frame = +3

Query: 1983 IAKWVEQILPFSXXXXXXXIRQHLQGFVVTICISALMFKSNEIIKKQTALKGDREVSVLL 2162
            +A+W+EQ+LPFS       IRQHLQGF VTI I+ +MFKSN+I++KQTALKG+R++SVL+
Sbjct: 158  VARWIEQVLPFSLLLLVVFIRQHLQGFFVTIGIAVVMFKSNDILRKQTALKGERKISVLV 217

Query: 2163 GFSFGFMLYVICIYWWYRNDDLFYPLAMIPPKETQPFWHTIFIILVNDTLVRQAAMAFKC 2342
            G S  FM++V+ +YWWY+NDDL YPL M+PPK   PFWH IFII+VNDTLVRQAAMAFKC
Sbjct: 218  GISLAFMVHVVAVYWWYQNDDLLYPLIMLPPKSIPPFWHAIFIIMVNDTLVRQAAMAFKC 277

Query: 2343 LLLIYYKNSRGHNFRRQGQMLTLVEYTVLLYRAFLPTPVWYRFFFNKDYGSLFSSLTTGL 2522
            +LLIYYKNSRG N+RRQGQMLTLVEY +LLYRA LP PVWYRFF NK+YGSLFSSL TGL
Sbjct: 278  VLLIYYKNSRGRNYRRQGQMLTLVEYLILLYRALLPAPVWYRFFLNKEYGSLFSSLMTGL 337

Query: 2523 YLTFKLTSVVEKAQCFICALKALSKKEILYGVYATTEQVRAAGDLCAICQEKMHSPVFLC 2702
            YLTFKLTS VEK Q F  ALKALS+KE+ YG +AT+EQV AAGDLCAICQEKMH+P+ L 
Sbjct: 338  YLTFKLTSFVEKVQSFFSALKALSRKEVHYGAHATSEQVNAAGDLCAICQEKMHAPILLR 397

Query: 2703 CKHMFCEECVSEWFERERTCPLCRALVKPADMRTFGDGSTSLFFQLF 2843
            CKH+FCE+CVSEWFERERTCPLCRALVKPAD+R+FGDGSTSL FQ+F
Sbjct: 398  CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLLFQIF 444


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