BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004237
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containi...   320   2e-85
ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containi...   317   2e-84
ref|XP_003617158.1| Pentatricopeptide repeat-containing protein ...   315   1e-83
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   283   4e-74
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   281   1e-73

>ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Glycine max]
          Length = 868

 Score =  320 bits (821), Expect = 2e-85
 Identities = 156/274 (56%), Positives = 207/274 (75%)
 Frame = -3

Query: 822  FNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNLR 643
            +N F+D AGHA K +LAREVFELM R GI P+ SS +L+L  YL S RISDAL  F  +R
Sbjct: 593  YNFFLDGAGHAMKPELAREVFELMQRNGIKPNLSSLILMLHVYLLSGRISDALNFFNGVR 652

Query: 642  CKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQLKSFHE 463
             +G+A ++LY +LI GLCK N+ DI++++ F ML+ G NPS +CYE LVQKLC L+ + E
Sbjct: 653  RQGLATKKLYVALITGLCKFNKIDISREYFFSMLRVGLNPSLECYELLVQKLCSLQKYSE 712

Query: 462  AIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKMPSVIL 283
            AI+++NV +KMGR ++SF+GN LL  SLISP++YD C +LRG   EEG FS       ++
Sbjct: 713  AIHIINVSQKMGRPVSSFIGNVLLYHSLISPQLYDTCNYLRGA--EEGVFSGNSTLCWMI 770

Query: 282  GAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRKATTHDMDQACELFFRICQRGYEP 103
            GA SGRLRV+ +I DLE L+ +CFP +IFTYN+LL++    DMD+A  LF R+CQRGY+P
Sbjct: 771  GAFSGRLRVSHYIADLERLVERCFPPNIFTYNLLLKQVAKSDMDKARLLFARMCQRGYQP 830

Query: 102  NRWTYDVMVHGFAKHGRKDDAKRWVEEMYQKGFY 1
            N WTYD+MV GF+ HGRK +A+RW+EEM++KGFY
Sbjct: 831  NCWTYDIMVRGFSIHGRKHEARRWLEEMFRKGFY 864


>ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Glycine max]
          Length = 872

 Score =  317 bits (812), Expect = 2e-84
 Identities = 152/270 (56%), Positives = 207/270 (76%)
 Frame = -3

Query: 822  FNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNLR 643
            +N F+D AGHA K +LAREVFELM R GI P+  S +L++  YL S RISDAL  F +++
Sbjct: 604  YNFFLDGAGHAMKPELAREVFELMQRNGITPNMCSLILMMNGYLISGRISDALNFFNDVQ 663

Query: 642  CKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQLKSFHE 463
             +G+A ++LY +LI GLCKSN+ DI++++ F ML+ G NPS +CYE LVQKLC L+ + E
Sbjct: 664  RRGLATKKLYVALITGLCKSNKVDISREYFFRMLRVGLNPSLECYELLVQKLCSLQRYSE 723

Query: 462  AIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKMPSVIL 283
            A++++NV +KMGR ++SF+GN LL  SLISP++YD CV+LRGV  EEG FS      +++
Sbjct: 724  AMHIINVSQKMGRPVSSFIGNVLLYHSLISPQLYDTCVNLRGV--EEGVFSGNSTLCLMI 781

Query: 282  GAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRKATTHDMDQACELFFRICQRGYEP 103
            GA SGRLRV+ +I DLE LI KCFP +IFTYN+LL++    DMD+A  LF R+CQRGY+P
Sbjct: 782  GAFSGRLRVSHYITDLERLIEKCFPPNIFTYNLLLKQVARSDMDKARLLFARMCQRGYQP 841

Query: 102  NRWTYDVMVHGFAKHGRKDDAKRWVEEMYQ 13
            N WTYD+MV GF+ HGR D+A+RW++EM++
Sbjct: 842  NSWTYDIMVRGFSIHGRNDEARRWLKEMFR 871


>ref|XP_003617158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355518493|gb|AET00117.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 978

 Score =  315 bits (806), Expect = 1e-83
 Identities = 162/274 (59%), Positives = 198/274 (72%)
 Frame = -3

Query: 825  IFNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNL 646
            IFN FI  AGHA   DLAREV+ELM R  IVP   S  L+L SYL++ +I DAL  F +L
Sbjct: 600  IFNFFIVGAGHANNTDLAREVYELMPRNNIVPTLLSQRLVLNSYLRNGKIIDALNFFNSL 659

Query: 645  RCKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQLKSFH 466
            R  GV  ++LY S+++GLCKSN+ DIA  FLFEML  G NP  +C+E LV KLC L+ +H
Sbjct: 660  RRLGVVSKKLYCSMVIGLCKSNKVDIAHDFLFEMLNAGVNPDIECFESLVWKLCSLRRYH 719

Query: 465  EAIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKMPSVI 286
            +AI L+ VY K GR+LTSFLGNTLL  S +SP++Y I VHLRG   EEG  S     S +
Sbjct: 720  KAINLVQVYMKGGRRLTSFLGNTLLWHSSLSPDVYGILVHLRGA--EEGENSPISTLSFV 777

Query: 285  LGAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRKATTHDMDQACELFFRICQRGYE 106
            +GA SG L VN  I++LE+LIA CFPLD  TYN LLR+  ++DM+QACELF R+CQRG +
Sbjct: 778  IGAFSGCLSVNRSIEELEKLIAMCFPLDTHTYNQLLRRVASYDMNQACELFNRMCQRGCK 837

Query: 105  PNRWTYDVMVHGFAKHGRKDDAKRWVEEMYQKGF 4
            PN WTYD MV GF  HGR D+AK+WVEEM+QKGF
Sbjct: 838  PNGWTYDFMVRGFLNHGRNDEAKQWVEEMHQKGF 871


>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  283 bits (723), Expect = 4e-74
 Identities = 139/274 (50%), Positives = 195/274 (71%)
 Frame = -3

Query: 825  IFNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNL 646
            ++N FID AGHA K +LAREVFE+M+R GIVP+ SS +L+L+SYL++ RISDAL  F +L
Sbjct: 600  VYNFFIDGAGHAKKPELAREVFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDL 659

Query: 645  RCKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQLKSFH 466
            + +    R+L N+++VGLCK+N+ DIA + L E+ + G  PS +CYEELV+ LC  K + 
Sbjct: 660  QKRRKVGRKLCNTMVVGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCTNKRYD 719

Query: 465  EAIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKMPSVI 286
              + L++  E++GR ++SF+GN LLL SL +PE+++  VH +    E    S   +   +
Sbjct: 720  VVVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKDAHNEIS--SPNLILGQL 777

Query: 285  LGAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRKATTHDMDQACELFFRICQRGYE 106
            +G  SG + VN     LEE++ +CFPLD++TYN+LLR+ T  DMD A ELF RICQ+GYE
Sbjct: 778  IGEFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTRSDMDLALELFNRICQKGYE 837

Query: 105  PNRWTYDVMVHGFAKHGRKDDAKRWVEEMYQKGF 4
            PNRWTYD++VHG  KHGR  +A +WVEEM+ KGF
Sbjct: 838  PNRWTYDILVHGLFKHGRTSEANKWVEEMFCKGF 871



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 14/286 (4%)
 Frame = -3

Query: 822  FNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNL- 646
            F+   DA     K D  +E+  + L   I+P AS++   + +  ++RR+ D  ++   L 
Sbjct: 461  FSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQGELN 520

Query: 645  RCKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQL---- 478
            +   VA +  Y ++I G    NRADIA + L E+ + G  P+   +  ++ +LC +    
Sbjct: 521  KINKVASKNTYFNMIRGFNILNRADIAARLLIELQEKGHTPTRSLFRAVICRLCDMDNAE 580

Query: 477  KSFHEAIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKM 298
            K F + + L   +++   Q+ +F                D   H +  EL    F     
Sbjct: 581  KQFLKLLELQLSHQEPNCQVYNF--------------FIDGAGHAKKPELAREVFEMMVR 626

Query: 297  PSVILGAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRK---------ATTHDMDQA 145
              ++    S  L +  ++K+     A  F  D+     + RK            + +D A
Sbjct: 627  SGIVPNLSSDILMLQSYLKNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIA 686

Query: 144  CELFFRICQRGYEPNRWTYDVMVHGFAKHGRKDDAKRWVEEMYQKG 7
             E+   I ++G  P+   Y+ +V     + R D     ++++ + G
Sbjct: 687  LEILKEIREKGVTPSLECYEELVKVLCTNKRYDVVVNLIDDLERVG 732


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  281 bits (719), Expect = 1e-73
 Identities = 138/273 (50%), Positives = 195/273 (71%)
 Frame = -3

Query: 825  IFNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNL 646
            ++N FID AGHA K +LAREVFE+M+R GIVP+ SS +L+L+SYL++ RISDAL  F +L
Sbjct: 600  VYNFFIDGAGHAKKPELAREVFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDL 659

Query: 645  RCKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQLKSFH 466
            + +    R+L N+++VGLCK+N+ DIA + L E+ + G  PS +CYEELV+ LC+ K + 
Sbjct: 660  QKRRKVGRKLCNTMVVGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCKNKRYD 719

Query: 465  EAIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKMPSVI 286
              + L++  E++GR ++SF+GN LLL SL +PE+++  VH +    E    S   +   +
Sbjct: 720  VVVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKDAHNEIS--SPNLILGQL 777

Query: 285  LGAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRKATTHDMDQACELFFRICQRGYE 106
            +G  SG + VN     LEE++ +CFPLD++TYN+LLR+ T  DMD A ELF RICQ+GYE
Sbjct: 778  IGEFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTRSDMDLALELFNRICQKGYE 837

Query: 105  PNRWTYDVMVHGFAKHGRKDDAKRWVEEMYQKG 7
            PNRWTYD++VHG  KHGR  +A +WVEEM+ KG
Sbjct: 838  PNRWTYDILVHGLFKHGRTSEANKWVEEMFCKG 870



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 62/286 (21%), Positives = 119/286 (41%), Gaps = 14/286 (4%)
 Frame = -3

Query: 822  FNRFIDAAGHACKADLAREVFELMLRCGIVPHASSHVLLLRSYLQSRRISDALILFYNL- 646
            F+   DA     K D  +E+  + L   I+P AS++   + +  ++RR+ D  ++   L 
Sbjct: 461  FSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQGELN 520

Query: 645  RCKGVACRRLYNSLIVGLCKSNRADIAQKFLFEMLKTGFNPSTDCYEELVQKLCQL---- 478
            +   VA +  Y ++I G    NRADIA + L E+ + G  P+   +  ++ +LC +    
Sbjct: 521  KINKVASKNTYFNMIRGFNILNRADIAARLLIELQEKGHTPTRSLFRAVICRLCDMDNAE 580

Query: 477  KSFHEAIYLLNVYEKMGRQLTSFLGNTLLLSSLISPEMYDICVHLRGVELEEGGFSSKKM 298
            K F + + L   +++   Q+ +F                D   H +  EL    F     
Sbjct: 581  KQFLKLLELQLSHQEPNCQVYNF--------------FIDGAGHAKKPELAREVFEMMVR 626

Query: 297  PSVILGAVSGRLRVNLHIKDLEELIAKCFPLDIFTYNVLLRK---------ATTHDMDQA 145
              ++    S  L +  ++K+     A  F  D+     + RK            + +D A
Sbjct: 627  SGIVPNLSSDILMLQSYLKNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIA 686

Query: 144  CELFFRICQRGYEPNRWTYDVMVHGFAKHGRKDDAKRWVEEMYQKG 7
             E+   I ++G  P+   Y+ +V    K+ R D     ++++ + G
Sbjct: 687  LEILKEIREKGVTPSLECYEELVKVLCKNKRYDVVVNLIDDLERVG 732