BLASTX nr result

ID: Glycyrrhiza23_contig00004221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004221
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135596.1| PREDICTED: 26S protease regulatory subunit 6...   192   4e-47
ref|NP_187204.1| regulatory particle triple-A ATPase 5A [Arabido...   192   4e-47
ref|XP_002330164.1| predicted protein [Populus trichocarpa] gi|2...   192   4e-47
gb|ACJ85402.1| unknown [Medicago truncatula] gi|388510128|gb|AFK...   192   4e-47
ref|XP_003591146.1| 26S protease regulatory subunit 6A-like prot...   192   4e-47

>ref|XP_004135596.1| PREDICTED: 26S protease regulatory subunit 6A homolog A-like
           [Cucumis sativus] gi|449525490|ref|XP_004169750.1|
           PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory
           subunit 6A homolog A-like [Cucumis sativus]
          Length = 423

 Score =  192 bits (487), Expect = 4e-47
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = +3

Query: 3   RSGRLDRKIEFPHPTEDARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 182
           RSGRLDRKIEFPHPTE+ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA
Sbjct: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387

Query: 183 GMLALRRDATEVNHEDFNEGIIQVQAKKKSSLNYYA 290
           GMLALRRDATEVNHEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 388 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423


>ref|NP_187204.1| regulatory particle triple-A ATPase 5A [Arabidopsis thaliana]
           gi|297829080|ref|XP_002882422.1| regulatory particle
           triple-a 5A [Arabidopsis lyrata subsp. lyrata]
           gi|75337114|sp|Q9SEI2.1|PS6AA_ARATH RecName: Full=26S
           protease regulatory subunit 6A homolog A; AltName:
           Full=26S proteasome AAA-ATPase subunit RPT5a; AltName:
           Full=Proteasome 26S subunit 6A homolog A; AltName:
           Full=Regulatory particle triple-A ATPase subunit 5a;
           AltName: Full=Tat-binding protein 1 homolog A;
           Short=TBP-1 homolog A
           gi|6652886|gb|AAF22525.1|AF123394_1 26S proteasome
           AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
           gi|7596759|gb|AAF64530.1| 26S proteasome AAA-ATPase
           subunit RPT5a [Arabidopsis thaliana]
           gi|17065258|gb|AAL32783.1| 26S proteasome AAA-ATPase
           subunit RPT5a [Arabidopsis thaliana]
           gi|297328262|gb|EFH58681.1| regulatory particle triple-a
           5A [Arabidopsis lyrata subsp. lyrata]
           gi|332640733|gb|AEE74254.1| regulatory particle triple-A
           ATPase 5A [Arabidopsis thaliana]
          Length = 424

 Score =  192 bits (487), Expect = 4e-47
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = +3

Query: 3   RSGRLDRKIEFPHPTEDARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 182
           RSGRLDRKIEFPHPTE+ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA
Sbjct: 329 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 388

Query: 183 GMLALRRDATEVNHEDFNEGIIQVQAKKKSSLNYYA 290
           GMLALRRDATEVNHEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 389 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 424


>ref|XP_002330164.1| predicted protein [Populus trichocarpa] gi|222871620|gb|EEF08751.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  192 bits (487), Expect = 4e-47
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = +3

Query: 3   RSGRLDRKIEFPHPTEDARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 182
           RSGRLDRKIEFPHPTE+ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA
Sbjct: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387

Query: 183 GMLALRRDATEVNHEDFNEGIIQVQAKKKSSLNYYA 290
           GMLALRRDATEVNHEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 388 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423


>gb|ACJ85402.1| unknown [Medicago truncatula] gi|388510128|gb|AFK43130.1| unknown
           [Medicago truncatula]
          Length = 423

 Score =  192 bits (487), Expect = 4e-47
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = +3

Query: 3   RSGRLDRKIEFPHPTEDARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 182
           RSGRLDRKIEFPHPTE+ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA
Sbjct: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387

Query: 183 GMLALRRDATEVNHEDFNEGIIQVQAKKKSSLNYYA 290
           GMLALRRDATEVNHEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 388 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423


>ref|XP_003591146.1| 26S protease regulatory subunit 6A-like protein [Medicago
           truncatula] gi|355480194|gb|AES61397.1| 26S protease
           regulatory subunit 6A-like protein [Medicago truncatula]
          Length = 423

 Score =  192 bits (487), Expect = 4e-47
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = +3

Query: 3   RSGRLDRKIEFPHPTEDARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 182
           RSGRLDRKIEFPHPTE+ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA
Sbjct: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387

Query: 183 GMLALRRDATEVNHEDFNEGIIQVQAKKKSSLNYYA 290
           GMLALRRDATEVNHEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 388 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423


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