BLASTX nr result

ID: Glycyrrhiza23_contig00004203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004203
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin...   409   e-112
gb|AFK44906.1| unknown [Medicago truncatula]                          407   e-111
ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   407   e-111
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   402   e-109
gb|AFK45606.1| unknown [Lotus japonicus]                              399   e-109

>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
           gi|255627433|gb|ACU14061.1| unknown [Glycine max]
          Length = 200

 Score =  409 bits (1050), Expect = e-112
 Identities = 198/200 (99%), Positives = 198/200 (99%)
 Frame = +1

Query: 103 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 282
           MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 283 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSQALVPDWQIGECVAIWW 462
           HPHILLLQIGNTFCKLPGGRLKPGENE EGLKRKLTSKLGANS ALVPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 463 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 642
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 643 PVISTIPQQLSRFQFKMITN 702
           PVISTIPQQLSRFQFKMITN
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  407 bits (1047), Expect = e-111
 Identities = 196/200 (98%), Positives = 197/200 (98%)
 Frame = +1

Query: 103 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 282
           M+ SQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
Sbjct: 1   MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 283 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSQALVPDWQIGECVAIWW 462
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS  LVPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120

Query: 463 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 642
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 643 PVISTIPQQLSRFQFKMITN 702
           PVISTIPQQLSRFQFKMITN
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200


>ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 5-like [Glycine max]
          Length = 200

 Score =  407 bits (1046), Expect = e-111
 Identities = 197/200 (98%), Positives = 197/200 (98%)
 Frame = +1

Query: 103 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 282
           MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 283 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSQALVPDWQIGECVAIWW 462
           HPHILLLQIGNTFCK PGGRLKPGENEIEGLKRKLTSKLGANS ALVPDWQI ECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKXPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQISECVAIWW 120

Query: 463 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 642
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 643 PVISTIPQQLSRFQFKMITN 702
           PVISTIPQQLSRFQFKMITN
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  402 bits (1032), Expect = e-109
 Identities = 194/199 (97%), Positives = 195/199 (97%)
 Frame = +1

Query: 103 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 282
           MV+S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 283 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSQALVPDWQIGECVAIWW 462
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS ALVPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 463 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 642
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 643 PVISTIPQQLSRFQFKMIT 699
           PVISTIPQQLSRFQF MIT
Sbjct: 181 PVISTIPQQLSRFQFNMIT 199


>gb|AFK45606.1| unknown [Lotus japonicus]
          Length = 200

 Score =  399 bits (1026), Expect = e-109
 Identities = 196/200 (98%), Positives = 196/200 (98%)
 Frame = +1

Query: 103 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 282
           MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 283 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSQALVPDWQIGECVAIWW 462
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS ALVPDWQIGECVAIW 
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWR 120

Query: 463 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 642
           RPNFETIMYPY PPHITKPKECKKLFLVHL EREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYRPPHITKPKECKKLFLVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 643 PVISTIPQQLSRFQFKMITN 702
           PVISTIPQQLSRFQFKMITN
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200


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