BLASTX nr result

ID: Glycyrrhiza23_contig00004201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004201
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   402   e-110
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   397   e-109
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   396   e-108
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   389   e-106
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              389   e-106

>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1214

 Score =  402 bits (1034), Expect = e-110
 Identities = 200/222 (90%), Positives = 206/222 (92%)
 Frame = +3

Query: 3    SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDQSRVLLLACHGS 182
            SIGFNLIEHVLCHIVKNERPGA LVFMTGWDDINSLKD+L AHPLLGDQSRVLLLACHGS
Sbjct: 576  SIGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGS 635

Query: 183  MASSEQRLIFENPKGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 362
            M+SSEQ+LIFENP GGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL
Sbjct: 636  MSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 695

Query: 363  PSWISKXXXXXXXXXXXXVQSGECYHLYPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQ 542
            PSWISK            VQSGECYHLYPRCVYDAFADYQ+PELLRTPLQSLCLQIKSLQ
Sbjct: 696  PSWISKAAARQRKGRAGRVQSGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQ 755

Query: 543  LGSISEFLSSALQSPEPLSVQNAVEYLKIIGALDENENLTIL 668
            LGSISEFLSSALQ PEPLSVQNAV+YLKIIGALDENENLT+L
Sbjct: 756  LGSISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVL 797


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1180

 Score =  397 bits (1021), Expect = e-109
 Identities = 199/222 (89%), Positives = 204/222 (91%)
 Frame = +3

Query: 3    SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDQSRVLLLACHGS 182
            SIGFNLIEHVLCHIVKNER GAVLVFMTGWDDI SLKDQLQAHPLLGDQSRVLLLACHGS
Sbjct: 543  SIGFNLIEHVLCHIVKNERSGAVLVFMTGWDDITSLKDQLQAHPLLGDQSRVLLLACHGS 602

Query: 183  MASSEQRLIFENPKGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 362
            MASSEQRLIFENP+GGVRKIVLATNMAETSITINDVVFVVD GKAKETSYDALNNTPCLL
Sbjct: 603  MASSEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDIGKAKETSYDALNNTPCLL 662

Query: 363  PSWISKXXXXXXXXXXXXVQSGECYHLYPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQ 542
            PSWISK            VQ GECYHLYPRCVYDAFADYQ+PELLRTPLQSLCLQIK+LQ
Sbjct: 663  PSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKTLQ 722

Query: 543  LGSISEFLSSALQSPEPLSVQNAVEYLKIIGALDENENLTIL 668
            LGSISEFLS ALQ PEPLSVQNA+EYLKIIGALDENENLT+L
Sbjct: 723  LGSISEFLSRALQPPEPLSVQNAIEYLKIIGALDENENLTVL 764


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1177

 Score =  396 bits (1017), Expect = e-108
 Identities = 196/222 (88%), Positives = 204/222 (91%)
 Frame = +3

Query: 3    SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDQSRVLLLACHGS 182
            SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQ HPLLGD S+VL+LACHGS
Sbjct: 540  SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQVHPLLGDHSQVLILACHGS 599

Query: 183  MASSEQRLIFENPKGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 362
            MASSEQRLIFENP+GGVRKIVLATNMAETSITINDVVFVVD GKAKETSYDALNNTPCLL
Sbjct: 600  MASSEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDIGKAKETSYDALNNTPCLL 659

Query: 363  PSWISKXXXXXXXXXXXXVQSGECYHLYPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQ 542
            PSWISK            VQ GECYHLYPRCVYDAFADYQ+PELLRTPLQSLCLQIK+LQ
Sbjct: 660  PSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKTLQ 719

Query: 543  LGSISEFLSSALQSPEPLSVQNAVEYLKIIGALDENENLTIL 668
            LGSISEFLS ALQ PEPLSVQNA++YLKIIGALDENENLT+L
Sbjct: 720  LGSISEFLSRALQPPEPLSVQNAIDYLKIIGALDENENLTVL 761


>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  389 bits (999), Expect = e-106
 Identities = 192/222 (86%), Positives = 201/222 (90%)
 Frame = +3

Query: 3    SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDQSRVLLLACHGS 182
            SIGFNLIEH LCHIVK ERPGAVLVFMTGWDDINSLKDQL+AHPLLGD SRVLLLACHGS
Sbjct: 541  SIGFNLIEHALCHIVKKERPGAVLVFMTGWDDINSLKDQLEAHPLLGDPSRVLLLACHGS 600

Query: 183  MASSEQRLIFENPKGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 362
            MASSEQRLIF+ P+ GVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL
Sbjct: 601  MASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 660

Query: 363  PSWISKXXXXXXXXXXXXVQSGECYHLYPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQ 542
            PSWISK            VQ GECYHLYP+CVYDAF+DYQ+PELLRTPLQSLCLQIKSLQ
Sbjct: 661  PSWISKASARQRRGRAGRVQPGECYHLYPKCVYDAFSDYQLPELLRTPLQSLCLQIKSLQ 720

Query: 543  LGSISEFLSSALQSPEPLSVQNAVEYLKIIGALDENENLTIL 668
            LGSISEFL+ ALQ PEPLSVQNA+EYLK IGALDENENLT+L
Sbjct: 721  LGSISEFLARALQPPEPLSVQNAIEYLKTIGALDENENLTVL 762


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  389 bits (999), Expect = e-106
 Identities = 192/222 (86%), Positives = 201/222 (90%)
 Frame = +3

Query: 3    SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDQSRVLLLACHGS 182
            SIGFNLIEH LCHIVK ERPGAVLVFMTGWDDINSLKDQL+AHPLLGD SRVLLLACHGS
Sbjct: 420  SIGFNLIEHALCHIVKKERPGAVLVFMTGWDDINSLKDQLEAHPLLGDPSRVLLLACHGS 479

Query: 183  MASSEQRLIFENPKGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 362
            MASSEQRLIF+ P+ GVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL
Sbjct: 480  MASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL 539

Query: 363  PSWISKXXXXXXXXXXXXVQSGECYHLYPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQ 542
            PSWISK            VQ GECYHLYP+CVYDAF+DYQ+PELLRTPLQSLCLQIKSLQ
Sbjct: 540  PSWISKASARQRRGRAGRVQPGECYHLYPKCVYDAFSDYQLPELLRTPLQSLCLQIKSLQ 599

Query: 543  LGSISEFLSSALQSPEPLSVQNAVEYLKIIGALDENENLTIL 668
            LGSISEFL+ ALQ PEPLSVQNA+EYLK IGALDENENLT+L
Sbjct: 600  LGSISEFLARALQPPEPLSVQNAIEYLKTIGALDENENLTVL 641


Top