BLASTX nr result

ID: Glycyrrhiza23_contig00004200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004200
         (1816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   659   0.0  
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   655   0.0  
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   652   0.0  
ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helica...   603   e-170
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   599   e-169

>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1214

 Score =  659 bits (1701), Expect = 0.0
 Identities = 333/408 (81%), Positives = 357/408 (87%)
 Frame = -3

Query: 1814 PKLGKMLILGAIFNCLDPILTVVAGLSMRDPFVMPADKKHLAESAKAQFAARDYSDHLAL 1635
            PKLGKMLILGAIFNCLDPILTVVAGLS+RDPFV+PADKK LAESAKAQ AAR YSDHLAL
Sbjct: 808  PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLAL 867

Query: 1634 VRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFLYLLKDIGLVDSNSETYNKW 1455
            VRAYDGWKDAEAQQAGYE+CWRNFLSSQTLRAIDSLRKQF +LLKDIGLV +NSET NKW
Sbjct: 868  VRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSETNNKW 927

Query: 1454 SHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYGNSVNAGVPKIPYPWLVF 1275
            S+EEHL+R VICAGLFPGISSVVNK+KSI+LKTMEDGQVLLY NSVN  V KIPYPW+VF
Sbjct: 928  SNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVF 987

Query: 1274 NEKVKVNSVFLRDSTGISDSMLLLFGGNISRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1095
            NEK+KVN+VFLRDSTGISDSMLLLFGGNIS+GGLDGHLKMLGGYLEFFMKPELAKTY +L
Sbjct: 988  NEKIKVNTVFLRDSTGISDSMLLLFGGNISKGGLDGHLKMLGGYLEFFMKPELAKTYSTL 1047

Query: 1094 KRELEELIQRKLLDPMLDIQSHDELLSALRLLVSEDHCDGRFVFGRQDLTQLKKKETNSK 915
            KRELEEL+ +KL DPM DI SH+ELLSA+RLLVSED+CDGRFV+G Q L QL KKET SK
Sbjct: 1048 KRELEELVHKKLADPMFDIHSHNELLSAVRLLVSEDNCDGRFVYGHQVLPQL-KKETKSK 1106

Query: 914  SGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQLKNNQFRSTVIFNGLNFVGQPCCSXXXX 735
            SGDG GGDNSKNQLQTFL+RAGH  PTYKT +L+NNQFRSTVIFNGL+FVGQPC S    
Sbjct: 1107 SGDGAGGDNSKNQLQTFLSRAGHQLPTYKTQELRNNQFRSTVIFNGLDFVGQPCNSKKLA 1166

Query: 734  XXXXXXXAILWLKGDNIHSSGDIDHASVLLXXXXXXXXXXXXSGAKWS 591
                   AILWLKGDN HSSGDIDHASVLL            S AKWS
Sbjct: 1167 EKSAAAEAILWLKGDNTHSSGDIDHASVLLKKRNKKSKKKSFSDAKWS 1214


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1177

 Score =  655 bits (1689), Expect = 0.0
 Identities = 331/408 (81%), Positives = 354/408 (86%)
 Frame = -3

Query: 1814 PKLGKMLILGAIFNCLDPILTVVAGLSMRDPFVMPADKKHLAESAKAQFAARDYSDHLAL 1635
            PKLGKMLILGAIF CLDPI+TVVAGLS+RDPFVMP+DKK LAESAKAQ AAR YSDHLAL
Sbjct: 772  PKLGKMLILGAIFKCLDPIMTVVAGLSVRDPFVMPSDKKDLAESAKAQLAARGYSDHLAL 831

Query: 1634 VRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFLYLLKDIGLVDSNSETYNKW 1455
            +RAY+GW+DAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQF YLLKDIGLV++NSETYN W
Sbjct: 832  IRAYEGWRDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVNNNSETYNTW 891

Query: 1454 SHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYGNSVNAGVPKIPYPWLVF 1275
            SHEEHL+R VICAGLFPGISSVVNKDKSIALKTMEDGQVLLY +SVN  V +IP+PWLVF
Sbjct: 892  SHEEHLLRAVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYSSSVNGCVSRIPFPWLVF 951

Query: 1274 NEKVKVNSVFLRDSTGISDSMLLLFGGNISRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1095
            NEKVKVNSVFLRDSTGISDS+LLLFGGN+SRGGLDGHLKMLGGYLEFFMKPELAKTYLSL
Sbjct: 952  NEKVKVNSVFLRDSTGISDSVLLLFGGNVSRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1011

Query: 1094 KRELEELIQRKLLDPMLDIQSHDELLSALRLLVSEDHCDGRFVFGRQDLTQLKKKETNSK 915
            K ELEELIQ+KLLDPML+ QSH ELLSA+RLLVSEDHCDGRFVFGRQ L Q  KKETNSK
Sbjct: 1012 KMELEELIQKKLLDPMLETQSHSELLSAVRLLVSEDHCDGRFVFGRQVLPQ-SKKETNSK 1070

Query: 914  SGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQLKNNQFRSTVIFNGLNFVGQPCCSXXXX 735
            +G G  G N KN LQ FLNRAGH SPTYKT +LKNNQFR+TV+FNGLNFVGQPC S    
Sbjct: 1071 TGGGAEGKNYKNHLQAFLNRAGHDSPTYKTKELKNNQFRTTVVFNGLNFVGQPCSSKKLA 1130

Query: 734  XXXXXXXAILWLKGDNIHSSGDIDHASVLLXXXXXXXXXXXXSGAKWS 591
                   A+LW+KGD  HSS DIDHASVLL            SGAKWS
Sbjct: 1131 EKSAAAEALLWIKGDG-HSSDDIDHASVLLKKSNKKSRKNSFSGAKWS 1177


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1180

 Score =  652 bits (1681), Expect = 0.0
 Identities = 332/408 (81%), Positives = 353/408 (86%)
 Frame = -3

Query: 1814 PKLGKMLILGAIFNCLDPILTVVAGLSMRDPFVMPADKKHLAESAKAQFAARDYSDHLAL 1635
            PKLGKMLILGAIF CLDPI+T+VAGLS+RDPFVMP+DKK LAESAKAQFAARDYSDHLAL
Sbjct: 775  PKLGKMLILGAIFKCLDPIMTIVAGLSVRDPFVMPSDKKDLAESAKAQFAARDYSDHLAL 834

Query: 1634 VRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFLYLLKDIGLVDSNSETYNKW 1455
            +RAYDGW+DAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQF YLLKDI LV++NSETYN W
Sbjct: 835  IRAYDGWRDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDICLVNNNSETYNTW 894

Query: 1454 SHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYGNSVNAGVPKIPYPWLVF 1275
            SHEEHL+R VICAGLFPGISSVVNKDKSIALKTMEDGQVLLY +SVN  VP+IP+PWLVF
Sbjct: 895  SHEEHLLRAVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYSSSVNGCVPRIPFPWLVF 954

Query: 1274 NEKVKVNSVFLRDSTGISDSMLLLFGGNISRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1095
            NEKVKVNSVFLRDSTGISDS+LLLFGGN+SRGGLDGHLKMLGGYLEFFMKPELAKTYLSL
Sbjct: 955  NEKVKVNSVFLRDSTGISDSVLLLFGGNVSRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1014

Query: 1094 KRELEELIQRKLLDPMLDIQSHDELLSALRLLVSEDHCDGRFVFGRQDLTQLKKKETNSK 915
            K  LEELIQ+KLLDPML+ QSH ELLSA+RLLVSEDHCDGRFVFGRQ L Q  KKETNSK
Sbjct: 1015 KMGLEELIQKKLLDPMLETQSHSELLSAVRLLVSEDHCDGRFVFGRQVLPQ-SKKETNSK 1073

Query: 914  SGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQLKNNQFRSTVIFNGLNFVGQPCCSXXXX 735
            +G      N KN LQ FLNRAGH SPTYKT +LKNNQFRSTVIFNGLNFVGQPC S    
Sbjct: 1074 TGGVAEEKNYKNHLQAFLNRAGHDSPTYKTKELKNNQFRSTVIFNGLNFVGQPCSSKKLA 1133

Query: 734  XXXXXXXAILWLKGDNIHSSGDIDHASVLLXXXXXXXXXXXXSGAKWS 591
                   A+LWLKGD+ HSS DIDHASVLL            S AKWS
Sbjct: 1134 EKSAAAEALLWLKGDS-HSSDDIDHASVLLKKSNKKSRKNSFSSAKWS 1180


>ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1168

 Score =  603 bits (1556), Expect = e-170
 Identities = 304/412 (73%), Positives = 339/412 (82%), Gaps = 4/412 (0%)
 Frame = -3

Query: 1814 PKLGKMLILGAIFNCLDPILTVVAGLSMRDPFVMPADKKHLAESAKAQFAARDYSDHLAL 1635
            PKLGKMLILGAIFNCLDPI+T+VAGLS+RDPF+MP+DKK LAESAKA FAARD SDHLAL
Sbjct: 757  PKLGKMLILGAIFNCLDPIMTIVAGLSVRDPFLMPSDKKDLAESAKAHFAARDCSDHLAL 816

Query: 1634 VRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFLYLLKDIGLVDSNSETYNKW 1455
            VRAY GW+DAE QQ+GYEYCWRNFLS QTLRAIDSLRKQF +LLKD GLVD +SE  N  
Sbjct: 817  VRAYQGWRDAEKQQSGYEYCWRNFLSMQTLRAIDSLRKQFFFLLKDAGLVDYDSEKCNIS 876

Query: 1454 SHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYGNSVNAGVPKIPYPWLVF 1275
            +H+EHL+R VICAGLFPGI SVVNK+KS+ALKTMEDGQV+LY NSVNAG PKIPYPWLVF
Sbjct: 877  NHDEHLIRAVICAGLFPGICSVVNKEKSVALKTMEDGQVMLYSNSVNAGYPKIPYPWLVF 936

Query: 1274 NEKVKVNSVFLRDSTGISDSMLLLFGGNISRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1095
            NEKVKVNSVFLRDSTG+SDS+LLLFGGN+SRGGLDGHLKML GYLEFFMKP LA+TYLSL
Sbjct: 937  NEKVKVNSVFLRDSTGVSDSVLLLFGGNVSRGGLDGHLKMLDGYLEFFMKPALAETYLSL 996

Query: 1094 KRELEELIQRKLLDPMLDIQSHDELLSALRLLVSEDHCDGRFVFGRQDLTQLKKKETNS- 918
            KREL+EL+ +KLL+P LD++ H+ELL+ALRLL+SEDHC GRFVFGR      KK  T+S 
Sbjct: 997  KRELDELVHQKLLNPKLDMEPHNELLTALRLLISEDHCAGRFVFGRHMPVPSKKAMTDSL 1056

Query: 917  ---KSGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQLKNNQFRSTVIFNGLNFVGQPCCS 747
               K GDG GGDNSKNQLQT L RAGH +PTY T QL+NNQFRSTVIFNGLNFVGQPC S
Sbjct: 1057 PRQKHGDGGGGDNSKNQLQTLLLRAGHETPTYNTKQLRNNQFRSTVIFNGLNFVGQPCGS 1116

Query: 746  XXXXXXXXXXXAILWLKGDNIHSSGDIDHASVLLXXXXXXXXXXXXSGAKWS 591
                       A+LWL+G+   SS  IDHAS+LL              AKWS
Sbjct: 1117 KKLAEKDAAAEALLWLQGETHSSSQAIDHASILLKKSRKKNTNPSFHSAKWS 1168


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1231

 Score =  599 bits (1545), Expect = e-169
 Identities = 300/394 (76%), Positives = 335/394 (85%), Gaps = 4/394 (1%)
 Frame = -3

Query: 1814 PKLGKMLILGAIFNCLDPILTVVAGLSMRDPFVMPADKKHLAESAKAQFAARDYSDHLAL 1635
            PKLGKMLILGAIFNCLDPI+T+VAGLS+RDPF+MP+DKK LAESAKA FAARD SDHLAL
Sbjct: 804  PKLGKMLILGAIFNCLDPIMTIVAGLSVRDPFLMPSDKKDLAESAKAHFAARDCSDHLAL 863

Query: 1634 VRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFLYLLKDIGLVDSNSETYNKW 1455
            VRAY GW+DAE QQ+GYEYCWRNFLS QTLRAIDSLRKQF +LLKD GLVD +SE  N  
Sbjct: 864  VRAYQGWRDAEKQQSGYEYCWRNFLSMQTLRAIDSLRKQFFFLLKDAGLVDYDSEKCNIS 923

Query: 1454 SHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQVLLYGNSVNAGVPKIPYPWLVF 1275
            +H+EHL+R VICAGLFPGI SVVNK+KS+ALKTMEDGQV+LY NSVNAG PKIPYPWLVF
Sbjct: 924  NHDEHLIRAVICAGLFPGICSVVNKEKSVALKTMEDGQVMLYSNSVNAGYPKIPYPWLVF 983

Query: 1274 NEKVKVNSVFLRDSTGISDSMLLLFGGNISRGGLDGHLKMLGGYLEFFMKPELAKTYLSL 1095
            NEKVKVNSVFLRDSTG+SDS+LLLFGGN+SRGGLDGHLKML GYLEFFMKP LA+TYLSL
Sbjct: 984  NEKVKVNSVFLRDSTGVSDSVLLLFGGNVSRGGLDGHLKMLDGYLEFFMKPALAETYLSL 1043

Query: 1094 KRELEELIQRKLLDPMLDIQSHDELLSALRLLVSEDHCDGRFVFGRQDLTQLKKKETNS- 918
            KREL+EL+ +KLL+P LD++ H+ELL+ALRLL+SEDHC GRFVFGR      KK  T+S 
Sbjct: 1044 KRELDELVHQKLLNPKLDMEPHNELLTALRLLISEDHCAGRFVFGRHMPVPSKKAMTDSL 1103

Query: 917  ---KSGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQLKNNQFRSTVIFNGLNFVGQPCCS 747
               K GDG GGDNSKNQLQT L RAGH +PTY T QL+NNQFRSTVIFNGLNFVGQPC S
Sbjct: 1104 PRQKHGDGGGGDNSKNQLQTLLLRAGHETPTYNTKQLRNNQFRSTVIFNGLNFVGQPCGS 1163

Query: 746  XXXXXXXXXXXAILWLKGDNIHSSGDIDHASVLL 645
                       A+LWL+G+   SS  IDHAS+LL
Sbjct: 1164 KKLAEKDAAAEALLWLQGETHSSSQAIDHASILL 1197


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