BLASTX nr result
ID: Glycyrrhiza23_contig00004155
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00004155
(1538 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containi... 687 0.0
ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycin... 664 0.0
ref|XP_003620888.1| Pentatricopeptide repeat-containing protein ... 637 e-180
gb|ACJ85227.1| unknown [Medicago truncatula] 548 e-174
ref|XP_003620812.1| Pentatricopeptide repeat-containing protein ... 576 e-163
>ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
[Glycine max]
Length = 452
Score = 687 bits (1774), Expect = 0.0
Identities = 354/467 (75%), Positives = 390/467 (83%), Gaps = 10/467 (2%)
Frame = +3
Query: 12 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAPP- 188
MELKLH S+AS+ PR PFC YAVP+ S+ RRNGT SRST + PP
Sbjct: 1 MELKLHTSMASI---PR-AVFTHSSSSIPFCAYAVPNASR---RRNGTNNSRSTHKIPPL 53
Query: 189 ---------KLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYVV 341
KL+LD HQNQN P N DLV LCEEG L+QVLELMGQGA+ADY V
Sbjct: 54 CKGNLPNEQKLQLD---HQNQNAPLP---LNVDLVSLCEEGNLDQVLELMGQGAVADYRV 107
Query: 342 YLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKMP 521
YLALL LCE +RSLESGKRVH FLRRS+F R++ELSNRLIGMY KCGS+KDARRVFD++P
Sbjct: 108 YLALLNLCEHTRSLESGKRVHEFLRRSTFRRDVELSNRLIGMYCKCGSVKDARRVFDQIP 167
Query: 522 ERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEGF 701
ERNISSWHLMI GY NGLG DGLLVF+QMKQ G + PDGETF LVLAACA+ EAVEEGF
Sbjct: 168 ERNISSWHLMIGGYAANGLGCDGLLVFQQMKQAG-VPPDGETFELVLAACAQAEAVEEGF 226
Query: 702 LHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFARM 881
LHFESMKE+GIVP MEHYL VINILG +GQLNEAEEFIEK+PIE+ GVE W++L NFA+
Sbjct: 227 LHFESMKEHGIVPSMEHYLEVINILGNTGQLNEAEEFIEKIPIEL-GVEAWESLRNFAQK 285
Query: 882 HGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYREDG 1061
HGD DLED A+E+LT LDPSKA ADKLP PPRK+QS +NMLEEKNRVT+YRY++PY+E+
Sbjct: 286 HGDLDLEDHAEEVLTCLDPSKAVADKLPPPPRKKQSDMNMLEEKNRVTEYRYSIPYKEEA 345
Query: 1062 NEKLKGLNGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI 1241
+EKL GL+GQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI
Sbjct: 346 HEKLGGLSGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI 405
Query: 1242 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 1382
IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 406 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 452
>ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 664 bits (1712), Expect = 0.0
Identities = 344/467 (73%), Positives = 381/467 (81%), Gaps = 10/467 (2%)
Frame = +3
Query: 12 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAPP- 188
MELKL AS+AS+ PR PFCTY VPD S+ RRNG SRST + P
Sbjct: 1 MELKLRASMASI---PR-AVFTNSSSFVPFCTYTVPDASR---RRNGNTGSRSTHKITPL 53
Query: 189 ---------KLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYVV 341
KLKLD HQNQN N DLV LCEEG L+QVLELMGQGA+ADY V
Sbjct: 54 RKEKHPNEQKLKLD---HQNQNP------LNVDLVALCEEGNLDQVLELMGQGAVADYRV 104
Query: 342 YLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKMP 521
YLALL LCE +RSLESGKRVH LRRS+F ++ELSNRLIGMY KCGS+K+ARRVFD+M
Sbjct: 105 YLALLNLCEHTRSLESGKRVHEILRRSAFRGDVELSNRLIGMYCKCGSVKNARRVFDQML 164
Query: 522 ERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEGF 701
+RN+++WHLMI GYT NGLG DGLLVF+QMKQ + PDGETF LVLAAC++ EAVEEGF
Sbjct: 165 DRNMATWHLMIGGYTSNGLGCDGLLVFQQMKQ-AELPPDGETFELVLAACSQAEAVEEGF 223
Query: 702 LHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFARM 881
LHFESMKEYGIVP MEHYL VINI+G +GQL EAEEFIE +PIE+ GVE W++L FAR+
Sbjct: 224 LHFESMKEYGIVPSMEHYLEVINIMGNAGQLKEAEEFIENVPIEL-GVEAWESLRKFARI 282
Query: 882 HGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYREDG 1061
HGD DLED A+ELLT DPSKA ADKLPTPPRK+QS +NMLEEKNR T+YRY++PY+E+
Sbjct: 283 HGDLDLEDCAEELLTRFDPSKAIADKLPTPPRKKQSDVNMLEEKNRATEYRYSIPYKEED 342
Query: 1062 NEKLKGLNGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI 1241
NEKL GL+GQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI
Sbjct: 343 NEKLGGLSGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI 402
Query: 1242 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 1382
IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 403 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 449
>ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 446
Score = 637 bits (1642), Expect = e-180
Identities = 327/468 (69%), Positives = 368/468 (78%), Gaps = 11/468 (2%)
Frame = +3
Query: 12 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAP-- 185
MELKL AS+AS S TPFCTYA+ + LHPR+NGT SR T R
Sbjct: 1 MELKLQASMASSSS-----------SSTPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQP 49
Query: 186 ---------PKLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYV 338
PKL + HQ++N FA +EG +NQVLELMGQGA ADY
Sbjct: 50 LRMGNPSIQPKLNHHQAPHQHKNVNFAH---------FLQEGNVNQVLELMGQGAFADYS 100
Query: 339 VYLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKM 518
+L+LLKLCED +SLE GKRVH FLRRS FG +EL NRLIG+Y KCGS+KDAR+VFDKM
Sbjct: 101 DFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKM 160
Query: 519 PERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEG 698
P+RN+ S +LMI GY NGLG DGLLVFKQM+Q+G + PD ETFALVLA CA V+ VEEG
Sbjct: 161 PDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVV-PDEETFALVLAVCALVDGVEEG 219
Query: 699 FLHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFAR 878
+ FESMKEYGIVPGMEHYL V+NI GC+G+L+EA EFIE MPIE GVE+W+ L NFAR
Sbjct: 220 LMQFESMKEYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEA-GVELWETLRNFAR 278
Query: 879 MHGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYRED 1058
+HGD + ED A ELLTVLDPSKA ADK+P P RK+QSAINMLEEKNRV++YR N+PY+E+
Sbjct: 279 IHGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEE 338
Query: 1059 GNEKLKGLNGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 1238
G+ KL+GL GQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR
Sbjct: 339 GDVKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 398
Query: 1239 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 1382
IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 399 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 446
>gb|ACJ85227.1| unknown [Medicago truncatula]
Length = 452
Score = 548 bits (1413), Expect(2) = e-174
Identities = 287/429 (66%), Positives = 329/429 (76%), Gaps = 11/429 (2%)
Frame = +3
Query: 12 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAP-- 185
MELKL AS+AS S TPFCTYA+ + LHPR+NGT SR T R
Sbjct: 1 MELKLQASMASSSS-----------SSTPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQP 49
Query: 186 ---------PKLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYV 338
PKL + HQ++N FA +EG +NQVLELMGQGA ADY
Sbjct: 50 LRMGNPSIQPKLNHHQAPHQHKNVNFAH---------FLQEGNVNQVLELMGQGAFADYS 100
Query: 339 VYLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKM 518
+L+LLKLCED +SLE GKRVH FLRRS FG +EL NRLIG+Y KCGS+KDAR+VFDK+
Sbjct: 101 DFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKV 160
Query: 519 PERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEG 698
P+RN+ S +LMI GY NGLG DGLLVFKQM+Q+G + PD ETFALVLA CA V+ VEEG
Sbjct: 161 PDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVV-PDEETFALVLAVCALVDGVEEG 219
Query: 699 FLHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFAR 878
+ FESMKEYGIVPGMEHYL V+NI GC+G+L+EA EFIE MPIE GVE+W+ L NFAR
Sbjct: 220 LMQFESMKEYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEA-GVELWETLRNFAR 278
Query: 879 MHGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYRED 1058
+HGD + ED A ELLTVLDPSKA ADK+P P RK+QSAINMLEEKNRV++YR N+PY+E+
Sbjct: 279 IHGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEE 338
Query: 1059 GNEKLKGLNGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 1238
G+ KL+GL GQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR
Sbjct: 339 GDVKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 398
Query: 1239 IIKNLRICG 1265
IIKNLRICG
Sbjct: 399 IIKNLRICG 407
Score = 92.0 bits (227), Expect(2) = e-174
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2
Query: 1265 RLPQCYQNHVKDCWKGAHCEG*QAIPSFQRWKMLLWRLLVVLVK 1396
RL QCYQNHV+DCWKGAHCEG Q IPSFQRWKMLLWRLLVVLVK
Sbjct: 408 RLSQCYQNHVQDCWKGAHCEGQQEIPSFQRWKMLLWRLLVVLVK 451
>ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 468
Score = 576 bits (1484), Expect(2) = e-163
Identities = 307/467 (65%), Positives = 348/467 (74%), Gaps = 11/467 (2%)
Frame = +3
Query: 12 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAP-- 185
MELKL AS+AS S TPFCTYA+ + LHPR+NGT SR T R
Sbjct: 1 MELKLQASMASSSS-----------SSTPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQP 49
Query: 186 ---------PKLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYV 338
PKL + HQ++N FA +EG +NQVLELMGQGA ADY
Sbjct: 50 LRMGNPSIQPKLNHHQTPHQHKNVNFAH---------FLQEGNVNQVLELMGQGAFADYS 100
Query: 339 VYLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKM 518
+L+LLKLCED +SLE GKRVH FLRRS FG +EL NRLIG+Y KCGS+KDAR+VFDKM
Sbjct: 101 DFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKM 160
Query: 519 PERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEG 698
P+RN+ S +LMI GY NGLG DGLLVFKQM+Q+G + PD ETFALVLA CA V+ VEEG
Sbjct: 161 PDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVV-PDEETFALVLAVCALVDGVEEG 219
Query: 699 FLHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFAR 878
+ FESMKEYGIVPGMEHYL V+NI GC+G L+EA+EFIE MPIE GV+VW+ L NFAR
Sbjct: 220 LMQFESMKEYGIVPGMEHYLGVVNIFGCAGPLDEAQEFIENMPIEA-GVDVWETLRNFAR 278
Query: 879 MHGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYRED 1058
++GD + EDRAK LLTV DPSKA ADK+P P RK+QSAINMLEEKNRV++YR
Sbjct: 279 IYGDLEREDRAK-LLTVRDPSKAAADKMPLPQRKKQSAINMLEEKNRVSEYRC------- 330
Query: 1059 GNEKLKGLNGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 1238
L GQ+REAGYVPDTRYVLHDIDEEEKEKAL+YHSERLAIAYGLISTPPRT LR
Sbjct: 331 -------LTGQIREAGYVPDTRYVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLR 383
Query: 1239 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDY 1379
IIKNLRICGDCHNAIK MSKIVG +LIVRDNKRFHHFKDGKC+ Y
Sbjct: 384 IIKNLRICGDCHNAIKFMSKIVGMKLIVRDNKRFHHFKDGKCAISMY 430
Score = 27.3 bits (59), Expect(2) = e-163
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 1352 RWKMLLWRLLVVLVKSVQM 1408
R +M L RLLVVLVKS QM
Sbjct: 450 RRRMFLCRLLVVLVKSTQM 468