BLASTX nr result

ID: Glycyrrhiza23_contig00004148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004148
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicag...   408   e-111
ref|XP_003536815.1| PREDICTED: protein OSB2, chloroplastic-like ...   377   e-102
ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like ...   372   e-101
ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Viti...   295   2e-77
emb|CBI17930.3| unnamed protein product [Vitis vinifera]              294   4e-77

>ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355479581|gb|AES60784.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 291

 Score =  408 bits (1049), Expect = e-111
 Identities = 202/281 (71%), Positives = 226/281 (80%), Gaps = 4/281 (1%)
 Frame = +1

Query: 19  STRLRNLLTFPQNPNSTPKFQVPFPCWRTTQPW--KLKLKCSSDSMTNTAASPPKPSEIP 192
           STR RNL TFPQNPN  PKF++PF    +++P      LKCS+    N AAS PKP EI 
Sbjct: 11  STRFRNLTTFPQNPNFIPKFKLPFSTTLSSKPIHRNFNLKCSNSITNNGAASYPKPPEIS 70

Query: 193 WQKELCNSVNLIGFVATPVEVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTFWDDLAHVAS 372
           W K+L NSVNLIGFVA P+E+K+ PSGKV+AWTRLSVKKN +Q S+IHLTFWD+LAHVAS
Sbjct: 71  WNKDLSNSVNLIGFVANPIEIKHLPSGKVVAWTRLSVKKNASQMSWIHLTFWDELAHVAS 130

Query: 373 HHVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLAPVSSHDQDSDF-TI 549
            HVQKGHQIHVSGRLVTDTV++ +G            LNFIDRS +PV SHDQD DF T 
Sbjct: 131 QHVQKGHQIHVSGRLVTDTVDSVDGKQQTYYKVVAQQLNFIDRSDSPVRSHDQDFDFITS 190

Query: 550 ADSGRKVSYAANS-TGSVVELWQAFFANPGEWWDNRKTKRNPKAPDFKHKDTGEALWIDG 726
            D+G+K SYA N  TGSVVELWQAFFANPGEWWDNR+ KRNPKAPDFKHKDTGEALWIDG
Sbjct: 191 DDNGKKASYATNGMTGSVVELWQAFFANPGEWWDNRRNKRNPKAPDFKHKDTGEALWIDG 250

Query: 727 RSNPPWVKSQLEILDMRMGSHAGQNGRMPVDMVTADEILSF 849
           RS PPWVKSQLEILDMRMGS+ GQNGRMPVDMV+ADE+LSF
Sbjct: 251 RSTPPWVKSQLEILDMRMGSYTGQNGRMPVDMVSADEMLSF 291


>ref|XP_003536815.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
          Length = 292

 Score =  377 bits (969), Expect = e-102
 Identities = 195/284 (68%), Positives = 219/284 (77%), Gaps = 7/284 (2%)
 Frame = +1

Query: 19  STRLRNLLTFPQNPNSTPKFQVPF-PCWRTTQP-WK----LKLKCSSDSMTNTAASPPKP 180
           S+ LRN+ T P+   S P+FQV   P W+  QP W+    + LKCS  + T T +S PKP
Sbjct: 10  SSTLRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTT-TTTPSSYPKP 68

Query: 181 SEIPWQKELCNSVNLIGFVATPVEVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTFWDDLA 360
           SEIPWQKELCNSVNLIG VA PVE+K  PSGKV+AWTRL VKK+ TQ+S I+LTFWDDLA
Sbjct: 69  SEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLTFWDDLA 128

Query: 361 HVASHHVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLAPVSSHD-QDS 537
           HVAS H+QKGHQIHVSGRL+TDTVET+EG            LNFI+R+ + VSS   Q+ 
Sbjct: 129 HVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSSSQGQEF 188

Query: 538 DFTIADSGRKVSYAANSTGSVVELWQAFFANPGEWWDNRKTKRNPKAPDFKHKDTGEALW 717
           DF +A SGRKVS AANSTGSVVE W AFFANPGEWWDNR  KRNPKAPDFKHKDTGEALW
Sbjct: 189 DFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPKAPDFKHKDTGEALW 248

Query: 718 IDGRSNPPWVKSQLEILDMRMGSHAGQNGRMPVDMVTADEILSF 849
           I+GR NPPWVKSQLEILD RMGS A QN RMPV MV ADEI+SF
Sbjct: 249 IEGRYNPPWVKSQLEILDSRMGSFASQNARMPVGMVAADEIVSF 292


>ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
          Length = 284

 Score =  372 bits (956), Expect = e-101
 Identities = 190/279 (68%), Positives = 213/279 (76%), Gaps = 2/279 (0%)
 Frame = +1

Query: 19  STRLRNLLTFPQNPNSTPKFQVPF-PCWRTTQPWKLKLKCSSDSMTNTAASPPKPSEIPW 195
           S+ LRN+LTFP+   S P+FQV   P W+T + W   LKCS      T  S PKPSEIPW
Sbjct: 11  SSTLRNVLTFPKTLISKPQFQVAASPSWKTQRRWG-NLKCSM----TTTPSYPKPSEIPW 65

Query: 196 QKELCNSVNLIGFVATPVEVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTFWDDLAHVASH 375
           QKELCNSVNLIG VA PVE+K+ PSGKV+AWTRL VKK+ TQ+S I LTFWDDLAHVAS 
Sbjct: 66  QKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKKSATQSSSISLTFWDDLAHVASQ 125

Query: 376 HVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLAPVSSHD-QDSDFTIA 552
           H+QKG+QIHVSGRL+ DTVET+EG            LNFI+R+ +  SS   Q+ DF +A
Sbjct: 126 HLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERNFSSASSSQGQEFDFAMA 185

Query: 553 DSGRKVSYAANSTGSVVELWQAFFANPGEWWDNRKTKRNPKAPDFKHKDTGEALWIDGRS 732
             GRKVS A NSTGSVVE W AFFANPGEWWDNR  KRNPKAPDFKHKDTGEALWI+GR 
Sbjct: 186 GGGRKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDFKHKDTGEALWIEGRY 245

Query: 733 NPPWVKSQLEILDMRMGSHAGQNGRMPVDMVTADEILSF 849
           +PPWVKSQLEILD RMGS AGQN RMPV MV ADEI+SF
Sbjct: 246 SPPWVKSQLEILDSRMGSFAGQNARMPVGMVAADEIVSF 284


>ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
          Length = 292

 Score =  295 bits (755), Expect = 2e-77
 Identities = 146/261 (55%), Positives = 186/261 (71%), Gaps = 6/261 (2%)
 Frame = +1

Query: 85  PFPCWRTTQPWKLKLKCS-----SDSMTNTAASPPKPSEIPWQKELCNSVNLIGFVATPV 249
           P P + +    K +L+CS     ++   N A S P+PSE+PW+KELCNSV+LIG V  PV
Sbjct: 32  PNPFFSSLPQPKTQLRCSIICNYNNDHHNQAVSYPRPSEVPWKKELCNSVSLIGIVGAPV 91

Query: 250 EVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTFWDDLAHVASHHVQKGHQIHVSGRLVTDT 429
           E+K+  SGKVLAWTRL+V+K+ + T++I+LTFWD+LAHVAS HV+KG QI+VSGRLV+DT
Sbjct: 92  EIKHLSSGKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDT 151

Query: 430 VETDEGXXXXXXXXXXXXLNFIDRSLAPVSSHDQDSDFTIADSGRKV-SYAANSTGSVVE 606
           VE DEG            LNF++RS +     +  +      SGRK+ S A NSTGS+ E
Sbjct: 152 VENDEGKQQTYYKVVVQQLNFVERSFSSADESNSLAAGNSTFSGRKLGSPATNSTGSIEE 211

Query: 607 LWQAFFANPGEWWDNRKTKRNPKAPDFKHKDTGEALWIDGRSNPPWVKSQLEILDMRMGS 786
           LWQAFFANP +WWDNRKTK+NPK PDFKHKDTGEALW++GR NP WVKSQL ILD RM S
Sbjct: 212 LWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSRMES 271

Query: 787 HAGQNGRMPVDMVTADEILSF 849
              Q+ RM V+++  D+ + F
Sbjct: 272 FRDQDARMHVNLMAGDDFMPF 292


>emb|CBI17930.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  294 bits (752), Expect = 4e-77
 Identities = 148/261 (56%), Positives = 188/261 (72%), Gaps = 6/261 (2%)
 Frame = +1

Query: 85  PFPCWRTTQPWKLKLKCS-----SDSMTNTAASPPKPSEIPWQKELCNSVNLIGFVATPV 249
           P P + +    K +L+CS     ++   N A S P+PSE+PW+KELCNSV+LIG V  PV
Sbjct: 32  PNPFFSSLPQPKTQLRCSIICNYNNDHHNQAVSYPRPSEVPWKKELCNSVSLIGIVGAPV 91

Query: 250 EVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTFWDDLAHVASHHVQKGHQIHVSGRLVTDT 429
           E+K+  SGKVLAWTRL+V+K+ + T++I+LTFWD+LAHVAS HV+KG QI+VSGRLV+DT
Sbjct: 92  EIKHLSSGKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDT 151

Query: 430 VETDEGXXXXXXXXXXXXLNFIDRSLAPVSSHDQDSDFTIADSGRKV-SYAANSTGSVVE 606
           VE DEG            LNF++RS    SS D+ +      +GRK+ S A NSTGS+ E
Sbjct: 152 VENDEGKQQTYYKVVVQQLNFVERSF---SSADESNSLA---AGRKLGSPATNSTGSIEE 205

Query: 607 LWQAFFANPGEWWDNRKTKRNPKAPDFKHKDTGEALWIDGRSNPPWVKSQLEILDMRMGS 786
           LWQAFFANP +WWDNRKTK+NPK PDFKHKDTGEALW++GR NP WVKSQL ILD RM S
Sbjct: 206 LWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSRMES 265

Query: 787 HAGQNGRMPVDMVTADEILSF 849
              Q+ RM V+++  D+ + F
Sbjct: 266 FRDQDARMHVNLMAGDDFMPF 286


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