BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004041
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532153.1| PREDICTED: transcription initiation factor T...   495   e-138
ref|XP_003532152.1| PREDICTED: transcription initiation factor T...   495   e-138
ref|XP_003551737.1| PREDICTED: transcription initiation factor T...   492   e-137
ref|XP_003600186.1| TATA binding protein-associated factor-like ...   474   e-131
ref|XP_002531209.1| transcription initiation factor tfiid, putat...   429   e-118

>ref|XP_003532153.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            isoform 2 [Glycine max]
          Length = 545

 Score =  495 bits (1275), Expect = e-138
 Identities = 257/333 (77%), Positives = 280/333 (84%), Gaps = 3/333 (0%)
 Frame = +3

Query: 3    VPYFTCFVADEVARNLNNLNILFALMRLVWSLVQNPHIHIELYLHQLMPPIITCIVAKRI 182
            VPYFT FVADEVA+NLNNL +LFALMRLV SL+QN  IHIELYLHQLMPPIITCIVAKRI
Sbjct: 215  VPYFTFFVADEVAQNLNNLAVLFALMRLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRI 274

Query: 183  GNRLSDNHWELRNFSANLVASICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK 362
            GNRLSD+HWELRNFSANLVASIC+RFGH+YHNLQPRVTKTFLH+FLDPTKALPQHYGAIK
Sbjct: 275  GNRLSDDHWELRNFSANLVASICQRFGHIYHNLQPRVTKTFLHSFLDPTKALPQHYGAIK 334

Query: 363  GIAAFGSRLVCLLILPNLEPYLHLLEPEMQLEKQKNEIKRHEAWQVYGALLCAVGQHMHE 542
            GI A GSRL+ LLILPNLEPYLHLLEPEMQ EKQKNE+KRHEAWQVYGALL A GQ +HE
Sbjct: 335  GIEALGSRLIRLLILPNLEPYLHLLEPEMQPEKQKNEMKRHEAWQVYGALLGAAGQCVHE 394

Query: 543  KVRRFSSLLSPPTRATSRGNGKAMIAMPSKRKASTDNLMQQQQ--PPLKKIATDGPGGVV 716
            KV+ FS+L SPPTR TSRG+GKA+IAM  KRKASTDNLMQQQQ  PP+KK+ATDGPGGVV
Sbjct: 395  KVKMFSNLFSPPTRVTSRGSGKAVIAMSGKRKASTDNLMQQQQQLPPMKKLATDGPGGVV 454

Query: 717  PMNSMSVDNMQGSTSGFXXXXXXXXXXXXXXXRQLSNDNMAGREVGGQQWKASSILAQAW 896
             MNSM VD MQGST G+               RQ+S DN+ GREVG QQ K SS LAQAW
Sbjct: 455  AMNSMLVD-MQGSTGGY---SSMMGVSSMSMARQISIDNVPGREVGDQQRKLSSTLAQAW 510

Query: 897  KEDIDVGQLLLPVFELFGESVLSF-IPKPEACI 992
            K+DID G L+  V ELFGESVL F +  PEAC+
Sbjct: 511  KDDIDTGNLVSSVVELFGESVLPFVVSNPEACM 543


>ref|XP_003532152.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            isoform 1 [Glycine max]
          Length = 539

 Score =  495 bits (1275), Expect = e-138
 Identities = 257/333 (77%), Positives = 280/333 (84%), Gaps = 3/333 (0%)
 Frame = +3

Query: 3    VPYFTCFVADEVARNLNNLNILFALMRLVWSLVQNPHIHIELYLHQLMPPIITCIVAKRI 182
            VPYFT FVADEVA+NLNNL +LFALMRLV SL+QN  IHIELYLHQLMPPIITCIVAKRI
Sbjct: 209  VPYFTFFVADEVAQNLNNLAVLFALMRLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRI 268

Query: 183  GNRLSDNHWELRNFSANLVASICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK 362
            GNRLSD+HWELRNFSANLVASIC+RFGH+YHNLQPRVTKTFLH+FLDPTKALPQHYGAIK
Sbjct: 269  GNRLSDDHWELRNFSANLVASICQRFGHIYHNLQPRVTKTFLHSFLDPTKALPQHYGAIK 328

Query: 363  GIAAFGSRLVCLLILPNLEPYLHLLEPEMQLEKQKNEIKRHEAWQVYGALLCAVGQHMHE 542
            GI A GSRL+ LLILPNLEPYLHLLEPEMQ EKQKNE+KRHEAWQVYGALL A GQ +HE
Sbjct: 329  GIEALGSRLIRLLILPNLEPYLHLLEPEMQPEKQKNEMKRHEAWQVYGALLGAAGQCVHE 388

Query: 543  KVRRFSSLLSPPTRATSRGNGKAMIAMPSKRKASTDNLMQQQQ--PPLKKIATDGPGGVV 716
            KV+ FS+L SPPTR TSRG+GKA+IAM  KRKASTDNLMQQQQ  PP+KK+ATDGPGGVV
Sbjct: 389  KVKMFSNLFSPPTRVTSRGSGKAVIAMSGKRKASTDNLMQQQQQLPPMKKLATDGPGGVV 448

Query: 717  PMNSMSVDNMQGSTSGFXXXXXXXXXXXXXXXRQLSNDNMAGREVGGQQWKASSILAQAW 896
             MNSM VD MQGST G+               RQ+S DN+ GREVG QQ K SS LAQAW
Sbjct: 449  AMNSMLVD-MQGSTGGY---SSMMGVSSMSMARQISIDNVPGREVGDQQRKLSSTLAQAW 504

Query: 897  KEDIDVGQLLLPVFELFGESVLSF-IPKPEACI 992
            K+DID G L+  V ELFGESVL F +  PEAC+
Sbjct: 505  KDDIDTGNLVSSVVELFGESVLPFVVSNPEACM 537


>ref|XP_003551737.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Glycine max]
          Length = 543

 Score =  492 bits (1267), Expect = e-137
 Identities = 250/329 (75%), Positives = 275/329 (83%), Gaps = 1/329 (0%)
 Frame = +3

Query: 3    VPYFTCFVADEVARNLNNLNILFALMRLVWSLVQNPHIHIELYLHQLMPPIITCIVAKRI 182
            VPYFT FVADEVARNLNNL +LFALMRLV SL+QN  IHIELYLHQLMPPIITCIVAKRI
Sbjct: 215  VPYFTFFVADEVARNLNNLAVLFALMRLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRI 274

Query: 183  GNRLSDNHWELRNFSANLVASICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK 362
            GNRLSD HWELRNFSANLV SIC+RFGH+YHNLQPRV KTFLH+FLDPTKALPQHYGAIK
Sbjct: 275  GNRLSDEHWELRNFSANLVTSICQRFGHIYHNLQPRVMKTFLHSFLDPTKALPQHYGAIK 334

Query: 363  GIAAFGSRLVCLLILPNLEPYLHLLEPEMQLEKQKNEIKRHEAWQVYGALLCAVGQHMHE 542
            GI A GSRL+ LLILPNLEPYLHLLEPEMQ EKQ+NE+KRHEAWQVYGALL A GQ +HE
Sbjct: 335  GIEALGSRLIRLLILPNLEPYLHLLEPEMQPEKQENEMKRHEAWQVYGALLGAAGQCVHE 394

Query: 543  KVRRFSSLLSPPTRATSRGNGKAMIAMPSKRKASTDNLMQQQQ-PPLKKIATDGPGGVVP 719
            KV+ F +L SPPT+ TSRG+GK++IAMP KRKAST NLMQQQQ PP+KK+ TDG GG VP
Sbjct: 395  KVKTFGNLFSPPTQVTSRGSGKSVIAMPGKRKASTVNLMQQQQLPPMKKLVTDGTGGAVP 454

Query: 720  MNSMSVDNMQGSTSGFXXXXXXXXXXXXXXXRQLSNDNMAGREVGGQQWKASSILAQAWK 899
            MNSMSVD MQGST G+               RQ+SNDN+ GR++G QQ K SS LAQAWK
Sbjct: 455  MNSMSVD-MQGSTGGY---SSMMGVSSMSMARQISNDNVPGRDIGDQQRKVSSTLAQAWK 510

Query: 900  EDIDVGQLLLPVFELFGESVLSFIPKPEA 986
            +DID G L+  V ELFGESVL F+P PEA
Sbjct: 511  DDIDAGNLVSSVVELFGESVLPFVPNPEA 539


>ref|XP_003600186.1| TATA binding protein-associated factor-like protein [Medicago
            truncatula] gi|355489234|gb|AES70437.1| TATA binding
            protein-associated factor-like protein [Medicago
            truncatula]
          Length = 510

 Score =  474 bits (1221), Expect = e-131
 Identities = 251/331 (75%), Positives = 265/331 (80%), Gaps = 1/331 (0%)
 Frame = +3

Query: 3    VPYFTCFVADEVARNLNNLNILFALMRLVWSLVQNPHIHIELYLHQLMPPIITCIVAKRI 182
            VPYFT FVADEVARNLNNLNILFALMRLV SL+QNPHIHIELYLHQLMPPIITCIVAKRI
Sbjct: 209  VPYFTRFVADEVARNLNNLNILFALMRLVRSLLQNPHIHIELYLHQLMPPIITCIVAKRI 268

Query: 183  GNRLSDNHWELRNFSANLVASICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK 362
            GNRLSDNHWELR+FSANLVA ICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK
Sbjct: 269  GNRLSDNHWELRDFSANLVALICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK 328

Query: 363  GIAAFGSRLVCLLILPNLEPYLHLLEPEMQLEKQKNEIKRHEAWQVYGALLCAVGQHMHE 542
            GIAA GSRLV LLILPNLEPYLHLLEPE QLEKQKNEIKR EAWQVYGALLCAVGQ+MHE
Sbjct: 329  GIAALGSRLVRLLILPNLEPYLHLLEPEKQLEKQKNEIKRQEAWQVYGALLCAVGQNMHE 388

Query: 543  KVRRFSSLLSPPTRATSRGNGKAMIAMPSKRKASTDNLMQQQQPPLKKIATDGPGGVV-P 719
            KV+RFSSLLSP +RATS GNGKAMIAMP                        G  GVV P
Sbjct: 389  KVKRFSSLLSPQSRATSSGNGKAMIAMP------------------------GVSGVVAP 424

Query: 720  MNSMSVDNMQGSTSGFXXXXXXXXXXXXXXXRQLSNDNMAGREVGGQQWKASSILAQAWK 899
            MNSMSVDNMQGSTSGF                 +   +  GR++  +   +SSILAQAWK
Sbjct: 425  MNSMSVDNMQGSTSGF-------PTMMGVSNSSVGMSSSMGRQLSNENNTSSSILAQAWK 477

Query: 900  EDIDVGQLLLPVFELFGESVLSFIPKPEACI 992
            +DID GQLL PVFELFGES+LSFIPKP+A I
Sbjct: 478  DDIDAGQLLPPVFELFGESLLSFIPKPQAFI 508


>ref|XP_002531209.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223529211|gb|EEF31186.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 468

 Score =  429 bits (1104), Expect = e-118
 Identities = 212/327 (64%), Positives = 255/327 (77%)
 Frame = +3

Query: 3    VPYFTCFVADEVARNLNNLNILFALMRLVWSLVQNPHIHIELYLHQLMPPIITCIVAKRI 182
            VPYF   +ADEVARNLNN ++LFALMR+  SL+QNPHIH+E YLHQLMP IITC+VAKR 
Sbjct: 140  VPYFIYLIADEVARNLNNFSVLFALMRVARSLLQNPHIHVEPYLHQLMPSIITCLVAKRS 199

Query: 183  GNRLSDNHWELRNFSANLVASICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIK 362
            GNR  DNH ELR+F+ANLVASICKRFGH+YHNLQPRVT+T LHTFLDP K+LPQHYGAI+
Sbjct: 200  GNRFCDNHLELRDFTANLVASICKRFGHVYHNLQPRVTRTLLHTFLDPLKSLPQHYGAIQ 259

Query: 363  GIAAFGSRLVCLLILPNLEPYLHLLEPEMQLEKQKNEIKRHEAWQVYGALLCAVGQHMHE 542
            G+AA G  +V LLILPNLEPYL LLEPEM LEKQKNE++RHEAW VYGAL+ A G  MH+
Sbjct: 260  GLAALGPNVVRLLILPNLEPYLLLLEPEMLLEKQKNEMRRHEAWSVYGALMRAAGLCMHD 319

Query: 543  KVRRFSSLLSPPTRATSRGNGKAMIAMPSKRKASTDNLMQQQQPPLKKIATDGPGGVVPM 722
            +++R   +L PPTRA  + +G+ M  +P+KRKAS+DNL+  QQPPLKK+ATDGP GV+PM
Sbjct: 320  RMKRLPGVLMPPTRAVWKSSGRLMTTVPNKRKASSDNLI--QQPPLKKLATDGPMGVIPM 377

Query: 723  NSMSVDNMQGSTSGFXXXXXXXXXXXXXXXRQLSNDNMAGREVGGQQWKASSILAQAWKE 902
            NSM VD MQG+T G+               RQL N+NM GR++ G+  K   +LA+AWKE
Sbjct: 378  NSMHVD-MQGATGGYHTASGASGMSISSMSRQLPNENMPGRDISGRVSKVLPVLARAWKE 436

Query: 903  DIDVGQLLLPVFELFGESVLSFIPKPE 983
            D+D G LL  + ELFGES+  F PKPE
Sbjct: 437  DMDAGHLLASLNELFGESMSCFAPKPE 463