BLASTX nr result

ID: Glycyrrhiza23_contig00004026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004026
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...   204   8e-51
ref|XP_003609285.1| Immunoglobulin G binding protein A [Medicago...   202   2e-50
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...   199   1e-49
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   183   1e-44
emb|CBI28171.3| unnamed protein product [Vitis vinifera]              177   8e-43

>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score =  204 bits (518), Expect = 8e-51
 Identities = 90/100 (90%), Positives = 93/100 (93%), Gaps = 2/100 (2%)
 Frame = +1

Query: 91  MDEDLLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFRH 270
           MDED LKR TDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSG CLNPTCAFRH
Sbjct: 1   MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60

Query: 271 PPLDGHTG--VPSEPMQSSLPVNKTVVPCYYFFNGFCNKG 384
           PPLDGHTG  VPSEP Q+SLP NKT+VPCY+FFNGFCNKG
Sbjct: 61  PPLDGHTGAPVPSEPTQTSLPANKTLVPCYFFFNGFCNKG 100


>ref|XP_003609285.1| Immunoglobulin G binding protein A [Medicago truncatula]
           gi|355510340|gb|AES91482.1| Immunoglobulin G binding
           protein A [Medicago truncatula]
          Length = 594

 Score =  202 bits (515), Expect = 2e-50
 Identities = 89/101 (88%), Positives = 93/101 (92%), Gaps = 2/101 (1%)
 Frame = +1

Query: 91  MDEDLLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFRH 270
           MDED  KRNTDCVYFLASPLTCKKG ECEYRH+EIARLNPRDCWYWLSGNCLNPTCAFRH
Sbjct: 1   MDEDFQKRNTDCVYFLASPLTCKKGVECEYRHHEIARLNPRDCWYWLSGNCLNPTCAFRH 60

Query: 271 PPLDGHTGVPSEPMQSSLP--VNKTVVPCYYFFNGFCNKGS 387
           PP+DGHTGVPSEP QSSLP   NKT+V CY+FFNGFCNKGS
Sbjct: 61  PPVDGHTGVPSEPTQSSLPATANKTMVTCYFFFNGFCNKGS 101


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score =  199 bits (507), Expect = 1e-49
 Identities = 88/100 (88%), Positives = 92/100 (92%), Gaps = 2/100 (2%)
 Frame = +1

Query: 91  MDEDLLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFRH 270
           MD+D LKR TDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSG CLNPTCAFRH
Sbjct: 1   MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60

Query: 271 PPLDGHTG--VPSEPMQSSLPVNKTVVPCYYFFNGFCNKG 384
           PPLDGHTG  VPSEP Q+SLP NKT+VPCY+FFNG CNKG
Sbjct: 61  PPLDGHTGASVPSEPTQTSLPANKTMVPCYFFFNGSCNKG 100


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score =  183 bits (465), Expect = 1e-44
 Identities = 78/99 (78%), Positives = 86/99 (86%)
 Frame = +1

Query: 88  KMDEDLLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFR 267
           +M+ED+ KRNTDCVYFLASPLTCKKG ECEYRHNEIARLNPRDCWYWL+G+C NPTCAFR
Sbjct: 2   QMEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFR 61

Query: 268 HPPLDGHTGVPSEPMQSSLPVNKTVVPCYYFFNGFCNKG 384
           HPPL+ H   P E   SS+P NKT VPCY+FFNGFCNKG
Sbjct: 62  HPPLEMHAEGPPELSSSSVPANKTNVPCYFFFNGFCNKG 100


>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  177 bits (449), Expect = 8e-43
 Identities = 76/102 (74%), Positives = 87/102 (85%), Gaps = 4/102 (3%)
 Frame = +1

Query: 91  MDEDLLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFRH 270
           M+++L KRNTDCVYFLASPLTCKKG +CEYRH+E ARLNPRDCWYWLSG+CLNP CAFRH
Sbjct: 1   MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60

Query: 271 PPLDGHTGVPSEPM----QSSLPVNKTVVPCYYFFNGFCNKG 384
           PPLDGH    SEP+     SS+PVNKT  PCY+++NGFCNKG
Sbjct: 61  PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKG 102


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