BLASTX nr result

ID: Glycyrrhiza23_contig00003985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003985
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycin...   479   e-133
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin...   477   e-132
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   427   e-117
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_003592859.1| Zinc finger CCCH domain-containing protein [...   399   e-109

>ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
            gi|255636715|gb|ACU18693.1| unknown [Glycine max]
          Length = 297

 Score =  479 bits (1234), Expect = e-133
 Identities = 235/302 (77%), Positives = 250/302 (82%)
 Frame = -1

Query: 1080 MDRKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 901
            MDRKRGRP+  FN NGGAKK RPE +SFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV
Sbjct: 1    MDRKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 60

Query: 900  PGGVKAASQIINVGSNPAVPQMGRNQTVPPSFPDGSSPPVVKTRLCNKYNTAEGCKFGDK 721
            PGG KA SQ+INVGSNP  PQ+GRN  VPPSFPDGSSPPVVKTRLCNK+NTAEGCKFGDK
Sbjct: 61   PGGFKAVSQLINVGSNPVTPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDK 119

Query: 720  CHFAHGEWELGRPNAPSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAK 541
            CHFAHGEWELGRP APSYED                  R+E                 AK
Sbjct: 120  CHFAHGEWELGRPTAPSYED----PRVLGQMPSSRVGGRVEPPHPAHGAAASFGASATAK 175

Query: 540  ISINASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMV 361
            ISINASLAGA+IGKNGVNSKQICR+TGAKLSIR+HD+DPNLRNIELEGSFDQIKQASAMV
Sbjct: 176  ISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMV 235

Query: 360  HDLILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRRS 181
            H++ILNVSS SGPPMK+ T+QTS P SNFKTKLCENF KGSCTFGERCHFAHGTDELR+S
Sbjct: 236  HEVILNVSSASGPPMKSFTSQTSAPTSNFKTKLCENFAKGSCTFGERCHFAHGTDELRKS 295

Query: 180  GM 175
            GM
Sbjct: 296  GM 297


>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
            [Glycine max]
          Length = 297

 Score =  477 bits (1228), Expect = e-132
 Identities = 234/302 (77%), Positives = 250/302 (82%)
 Frame = -1

Query: 1080 MDRKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 901
            MDRKRGR +  FN NGGAKK RPEM+SFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV
Sbjct: 1    MDRKRGRHEAAFNFNGGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 60

Query: 900  PGGVKAASQIINVGSNPAVPQMGRNQTVPPSFPDGSSPPVVKTRLCNKYNTAEGCKFGDK 721
            PGG KA SQ+INVGSNP +PQ+GRN  VPPSFPDGSSPPVVKTRLCNK+NTAEGCKFGDK
Sbjct: 61   PGGFKAVSQLINVGSNPVIPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDK 119

Query: 720  CHFAHGEWELGRPNAPSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAK 541
            CHFAHGEWELGRP APSYED                  R+E                 AK
Sbjct: 120  CHFAHGEWELGRPTAPSYED----PRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAK 175

Query: 540  ISINASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMV 361
            ISINASLAGA+IGKNGVNSKQICR+TGAKLSIR+HD+DPNLRNIELEGSFDQIKQASAMV
Sbjct: 176  ISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMV 235

Query: 360  HDLILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRRS 181
            H++ILNVSS SGPPMK+ T+Q S PASNFKTKLCENF KGSCTFGERCHFAHG DELR+S
Sbjct: 236  HEVILNVSSASGPPMKSFTSQNSAPASNFKTKLCENFAKGSCTFGERCHFAHGNDELRKS 295

Query: 180  GM 175
            GM
Sbjct: 296  GM 297


>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like [Vitis
            vinifera]
          Length = 301

 Score =  427 bits (1097), Expect = e-117
 Identities = 205/297 (69%), Positives = 232/297 (78%)
 Frame = -1

Query: 1074 RKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 895
            RKRGR +G  NGNGG KK + EMESF +G+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 7    RKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 66

Query: 894  GVKAASQIINVGSNPAVPQMGRNQTVPPSFPDGSSPPVVKTRLCNKYNTAEGCKFGDKCH 715
            G+KA SQ++N+G N  +    RN  VPPSFPDGSSPP VKTRLCNKYN+AEGCKFGDKCH
Sbjct: 67   GIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCKFGDKCH 126

Query: 714  FAHGEWELGRPNAPSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAKIS 535
            FAHGEWELG+P  PS+ +                  R+E                 AKIS
Sbjct: 127  FAHGEWELGKPTLPSHHE------DHRGMGSGRLAGRLEPPPPGLAAAASFGASATAKIS 180

Query: 534  INASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMVHD 355
            ++ASLAGAIIGK+GVNSKQICR+TGAKLSI++HDSDPNLRNIELEG+FDQIKQASAMV +
Sbjct: 181  VDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQIKQASAMVRE 240

Query: 354  LILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRR 184
            LI+N+SS SGPPM+N   Q S  A+NFKTKLCENFTKGSCTFGERCHFAHG DELR+
Sbjct: 241  LIVNISSASGPPMRNPAMQASAAANNFKTKLCENFTKGSCTFGERCHFAHGADELRK 297


>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  402 bits (1032), Expect = e-109
 Identities = 200/302 (66%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
 Frame = -1

Query: 1074 RKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 895
            RKR R D  FNGNGG KK R EMESF TG+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 8    RKRTRNDAAFNGNGGHKKNRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 67

Query: 894  GVKAASQIINVGSNPAVPQMGRNQTVPP-SFPDGSSPPVVKTRLCNKYNTAEGCKFGDKC 718
            G KA SQ++NVG +PA+P   RNQ VP  S+ D SSPP VK+RLCNKYNT EGCKFGDKC
Sbjct: 68   GFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTVEGCKFGDKC 127

Query: 717  HFAHGEWELGRPN-APSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAK 541
            HFAHGEWELG+ + APSYED                   +E                  K
Sbjct: 128  HFAHGEWELGKASAAPSYED-----PRAMGPIPGRMSRHMEHPHQGHGAAASFGSSATTK 182

Query: 540  ISINASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMV 361
            ISI+ASLAGAIIGKNGVNSK ICR+TGAKLSIR+H++DP  R+IELEGSFDQI QAS MV
Sbjct: 183  ISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFDQISQASDMV 242

Query: 360  HDLILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRRS 181
              LI NV   SGPP+KN    +SG ++NFKTK+CENF KGSCTFG+RCHFAHG +ELR+S
Sbjct: 243  RQLISNVGQASGPPIKNQAMHSSGGSNNFKTKICENFNKGSCTFGDRCHFAHGAEELRKS 302

Query: 180  GM 175
            GM
Sbjct: 303  GM 304


>ref|XP_003592859.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355481907|gb|AES63110.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 340

 Score =  399 bits (1026), Expect = e-109
 Identities = 197/272 (72%), Positives = 211/272 (77%)
 Frame = -1

Query: 990 GLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPGGVKAASQIINVGSNPAVPQMGRNQTVPP 811
           G+    +P  + F TSGCPFGEGCHFLHYVPGG KA  Q+INVGS+PA+P +GRN  VP 
Sbjct: 73  GVPRPQEPLWRDFDTSGCPFGEGCHFLHYVPGGFKAVYQMINVGSSPAIPPIGRNPNVPQ 132

Query: 810 SFPDGSSPPVVKTRLCNKYNTAEGCKFGDKCHFAHGEWELGRPNAPSYEDAXXXXXXXXX 631
           SFPDGSSPPV KTRLCNK+NTAEGCKFGDKCHFAHGEWELGRP  P+YED          
Sbjct: 133 SFPDGSSPPVAKTRLCNKFNTAEGCKFGDKCHFAHGEWELGRPTVPAYEDTRAMGQMQSS 192

Query: 630 XXXXXXXXRIEXXXXXXXXXXXXXXXXXAKISINASLAGAIIGKNGVNSKQICRITGAKL 451
                    IE                 A +SINA+LAGAIIGKN VNSKQIC ITGAKL
Sbjct: 193 SVGGR----IEPPPPAHGAAAGFGVSATATVSINATLAGAIIGKNDVNSKQICHITGAKL 248

Query: 450 SIREHDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPPMKNNTTQTSGPASNFK 271
           SIREHDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPP KN T+QTS PA+NFK
Sbjct: 249 SIREHDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPPGKNITSQTSAPANNFK 308

Query: 270 TKLCENFTKGSCTFGERCHFAHGTDELRRSGM 175
           TKLCENFTKGSCTFGERCHFAHGTDELR+ GM
Sbjct: 309 TKLCENFTKGSCTFGERCHFAHGTDELRKPGM 340


Top