BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003934
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619828.1| Pentatricopeptide repeat-containing protein ...   508   e-142
ref|XP_003544380.1| PREDICTED: pentatricopeptide repeat-containi...   454   e-125
emb|CBI18867.3| unnamed protein product [Vitis vinifera]              347   3e-93
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...   347   3e-93
ref|XP_002889073.1| pentatricopeptide repeat-containing protein ...   337   2e-90

>ref|XP_003619828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494843|gb|AES76046.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 895

 Score =  508 bits (1309), Expect = e-142
 Identities = 246/299 (82%), Positives = 275/299 (91%)
 Frame = +3

Query: 3    DMANNGFQHSPRSIKNILKSLGEEGMIRELIQYLHVAENLFIYTNPSLGADMYNIVLHYL 182
            DMANNGFQHS  S+KN++KSLGEEGMIRELIQYLHVAENLF+++NPSLG DM+NIVLHYL
Sbjct: 536  DMANNGFQHSYLSLKNLMKSLGEEGMIRELIQYLHVAENLFLFSNPSLGTDMFNIVLHYL 595

Query: 183  VEANESQMAIEIFKKMKLCGCHPDCTTYNIMIDCCSIIRSYKSASLLISMMIREGFCPVT 362
            VEA E  MAIEIFKKMKLCGCHPD TTYNIMIDCCSIIRSY+SASLLISMMIREGFCPV 
Sbjct: 596  VEAQEGHMAIEIFKKMKLCGCHPDSTTYNIMIDCCSIIRSYRSASLLISMMIREGFCPVA 655

Query: 363  CTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNKFLREACYKGRIDVIEFVVEC 542
            CTYTAL+KILLEDENF+EA+D+LERI+LDGI+LDVLLFN FLR+ACY+GRIDVIEF+VE 
Sbjct: 656  CTYTALVKILLEDENFNEAVDVLERIKLDGIKLDVLLFNTFLRQACYRGRIDVIEFIVEF 715

Query: 543  MRREKIQPNPATCDYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILAERKNFVDEFIL 722
            M +EK+QP+PATC YVFSAYVNS FHNTAIEALQVLSLRMMSEDGNIL ERK+ VDEFIL
Sbjct: 716  MHQEKVQPDPATCGYVFSAYVNSSFHNTAIEALQVLSLRMMSEDGNILKERKDLVDEFIL 775

Query: 723  AEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRIESRLLKRL 899
             EDLA+ES I +LFEDSEDE++ GLLNLRWCAI+GFP+CESA+ S WAKR+E R  KRL
Sbjct: 776  NEDLASESHIFKLFEDSEDEVATGLLNLRWCAIIGFPLCESADRSLWAKRLELRFQKRL 834


>ref|XP_003544380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Glycine max]
          Length = 738

 Score =  454 bits (1169), Expect = e-125
 Identities = 223/296 (75%), Positives = 256/296 (86%), Gaps = 1/296 (0%)
 Frame = +3

Query: 6    MANNGFQHSPRSIKNILKSLGEEGMIRELIQYLHVAENLFIYTNPSLGADMYNIVLHYLV 185
            MANNG QHS  S+  ++++LGEEGMI+ELIQYLHVAENLFIY NPSLG  MYN VLHYLV
Sbjct: 443  MANNGIQHSHLSMNKLMRALGEEGMIKELIQYLHVAENLFIYRNPSLGTHMYNTVLHYLV 502

Query: 186  EANESQMAIEIFKKMKLCGCHPDCTTYNIMIDCCSIIRSYKSASLLISMMIREGFCPVTC 365
            EA ES   I IFKKMKLCGCHPD  TYNIMIDCC+I++SY+SA LL+SMMIR+GF PV C
Sbjct: 503  EAKESDTVIAIFKKMKLCGCHPDSETYNIMIDCCTILKSYRSACLLLSMMIRKGFHPVIC 562

Query: 366  TYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNKFLREACYKGRIDVIEFVVECM 545
            TY A+I+ILLEDENF+EAL+LL+++ LDGIQ DVLLFN  L+EACYKGRIDVIEF+VECM
Sbjct: 563  TYNAIIEILLEDENFNEALNLLKQVILDGIQPDVLLFNTVLKEACYKGRIDVIEFIVECM 622

Query: 546  RREKIQPNPATCDYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILAERKNFVDEFILA 725
            RREK+ P+  TC YVFSAYV+SGFHNTAIEALQVLSLRMMSEDGNIL E  NFV+EFIL+
Sbjct: 623  RREKVPPDTRTCGYVFSAYVDSGFHNTAIEALQVLSLRMMSEDGNILRENTNFVNEFILS 682

Query: 726  EDLA-AESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRIESRLL 890
            ED+A  ES IL+LFEDSEDEL++GLLNLRWCAI GFPIC+SA+ S WAKR+E   L
Sbjct: 683  EDVAVVESQILKLFEDSEDELAIGLLNLRWCAIAGFPICKSADQSLWAKRLEGMQL 738


>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  347 bits (889), Expect = 3e-93
 Identities = 177/291 (60%), Positives = 221/291 (75%)
 Frame = +3

Query: 3    DMANNGFQHSPRSIKNILKSLGEEGMIRELIQYLHVAENLFIYTNPSLGADMYNIVLHYL 182
            DM NNG QHS  S+KN+LK+LG EGMIREL+QYLHVAEN F  TN  LG  +YN VLH L
Sbjct: 503  DMMNNGIQHSHLSMKNLLKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSL 562

Query: 183  VEANESQMAIEIFKKMKLCGCHPDCTTYNIMIDCCSIIRSYKSASLLISMMIREGFCPVT 362
            VEA ES +AIEIFK M       D  TYNIMIDCCS I+ YKSA  L+SMM+R+GF P T
Sbjct: 563  VEAKESHIAIEIFKNMISRSLPRDAATYNIMIDCCSTIKCYKSACALVSMMMRDGFLPWT 622

Query: 363  CTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNKFLREACYKGRIDVIEFVVEC 542
             TYTALIKILLE E+F EAL+LL++ RL+ I  DVLL+N  L++AC KGRID+IE V E 
Sbjct: 623  LTYTALIKILLEREDFDEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDLIELVAEQ 682

Query: 543  MRREKIQPNPATCDYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILAERKNFVDEFIL 722
            M +EKIQP+P+TC YVFS+YV+ GF +TA+E+LQVLS+RM+SED + L E++  +++FI 
Sbjct: 683  MHQEKIQPDPSTCYYVFSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRTELEDFIH 742

Query: 723  AEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRI 875
            +ED  AES ILQ F+ S++ L++ LLNLRWCAI G PI  +   S WA+R+
Sbjct: 743  SEDKDAESQILQFFKGSDENLAIALLNLRWCAISGSPISWTPNESLWARRL 793


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Vitis vinifera]
          Length = 728

 Score =  347 bits (889), Expect = 3e-93
 Identities = 177/291 (60%), Positives = 221/291 (75%)
 Frame = +3

Query: 3    DMANNGFQHSPRSIKNILKSLGEEGMIRELIQYLHVAENLFIYTNPSLGADMYNIVLHYL 182
            DM NNG QHS  S+KN+LK+LG EGMIREL+QYLHVAEN F  TN  LG  +YN VLH L
Sbjct: 427  DMMNNGIQHSHLSMKNLLKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSL 486

Query: 183  VEANESQMAIEIFKKMKLCGCHPDCTTYNIMIDCCSIIRSYKSASLLISMMIREGFCPVT 362
            VEA ES +AIEIFK M       D  TYNIMIDCCS I+ YKSA  L+SMM+R+GF P T
Sbjct: 487  VEAKESHIAIEIFKNMISRSLPRDAATYNIMIDCCSTIKCYKSACALVSMMMRDGFLPWT 546

Query: 363  CTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNKFLREACYKGRIDVIEFVVEC 542
             TYTALIKILLE E+F EAL+LL++ RL+ I  DVLL+N  L++AC KGRID+IE V E 
Sbjct: 547  LTYTALIKILLEREDFDEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDLIELVAEQ 606

Query: 543  MRREKIQPNPATCDYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILAERKNFVDEFIL 722
            M +EKIQP+P+TC YVFS+YV+ GF +TA+E+LQVLS+RM+SED + L E++  +++FI 
Sbjct: 607  MHQEKIQPDPSTCYYVFSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRTELEDFIH 666

Query: 723  AEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRI 875
            +ED  AES ILQ F+ S++ L++ LLNLRWCAI G PI  +   S WA+R+
Sbjct: 667  SEDKDAESQILQFFKGSDENLAIALLNLRWCAISGSPISWTPNESLWARRL 717


>ref|XP_002889073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297334914|gb|EFH65332.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 800

 Score =  337 bits (865), Expect = 2e-90
 Identities = 170/296 (57%), Positives = 220/296 (74%), Gaps = 2/296 (0%)
 Frame = +3

Query: 3    DMANNGFQHSPRSIKNILKSLGEEGMIRELIQYLHVAENLFIYTNPSLGADMYNIVLHYL 182
            DM  NGFQHSP S +N+L++LG EGM+ E+I++L  AENL +++N  LG   YNIVLH L
Sbjct: 503  DMVRNGFQHSPISRRNVLRALGAEGMVNEMIRHLQKAENLNVHSNMYLGTPTYNIVLHSL 562

Query: 183  VEANESQMAIEIFKKMKLCGCHPDCTTYNIMIDCCSIIRSYKSASLLISMMIREGFCPVT 362
            +EANE+ M I IFK+MK CGC  D  TYNIMIDCCSII SYKSA  L+SMMIR+GF P  
Sbjct: 563  LEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSIIHSYKSACALVSMMIRDGFSPKA 622

Query: 363  CTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNKFLREACYKGRIDVIEFVVEC 542
             T+TAL+KILL D NF EAL+LL++  L+ I LDVL +N  LR+A  KG IDVIE++VE 
Sbjct: 623  VTFTALMKILLNDGNFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQ 682

Query: 543  MRREKIQPNPATCDYVFSAYVNSGFHNTAIEALQVLSLRMMS-EDGNILAERKNFVDE-F 716
            M REK+ P+P TC YVF+ YV  G+H TAIEAL VLSLRM++ ED   L E+K  ++E F
Sbjct: 683  MHREKVNPDPTTCHYVFTCYVEKGYHATAIEALNVLSLRMLNEEDKESLQEKKIELEENF 742

Query: 717  ILAEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRIESR 884
            +++ED  AE+ I++LF +SE+ L+  LLNLRWCA+LG  I  S + SPWA+ + ++
Sbjct: 743  VMSEDPEAETKIIELFRNSEEHLAAALLNLRWCAMLGARIIWSEDQSPWARGLSNK 798