BLASTX nr result
ID: Glycyrrhiza23_contig00003927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00003927
(2051 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003592720.1| Pentatricopeptide repeat-containing protein ... 873 0.0
ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containi... 852 0.0
ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containi... 854 0.0
ref|XP_002298285.1| predicted protein [Populus trichocarpa] gi|2... 719 0.0
ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containi... 713 0.0
>ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 553
Score = 873 bits (2256), Expect = 0.0
Identities = 437/526 (83%), Positives = 472/526 (89%), Gaps = 2/526 (0%)
Frame = +1
Query: 82 MYSFVSKSHCHLG--QFPFPPLHTGKLEYGIAKVKMGGRMEVVCKGMLAPXXXXXXXXXX 255
M S +SKSHCHLG Q PL T KLEYGI VKM GR++V+CKGML P
Sbjct: 1 MCSLISKSHCHLGLGQLSLQPLQTRKLEYGIVNVKMSGRLKVMCKGMLTPRKFMQRKRKM 60
Query: 256 XXXXDAADEAYQKNWWKLMNQIDETGSAVSVLSSEMMKNQTIPKDLVIGTLIRFKQLQKW 435
DAADEA QKNWW+LM IDETGSAVSVL+SE MKNQTIPK LV+GTL+RFKQL+KW
Sbjct: 61 VVFKDAADEAEQKNWWRLMKLIDETGSAVSVLNSEKMKNQTIPKALVVGTLMRFKQLKKW 120
Query: 436 NLVAETLEWLWTQSWWNFGKMDFFMLITAYGKLGDFNGAEKVLALMNKNGYASNVVSQTA 615
NLVAE LEWL Q+WW+FGKMDFFMLITAYGKLGDFNGAEKVL LMNKNGYA NVVSQTA
Sbjct: 121 NLVAEILEWLRAQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTA 180
Query: 616 LMEAYGRGGKYNNAEAIFRRMQRFGPEPSALTYQIILKTFVRGDKFKEAEEVFNNLLDDE 795
LMEAYG+GG+YNNAEAIFRRMQ FGPEPSA TYQIILKTFV+G+KFKEAEEVF+ LL+DE
Sbjct: 181 LMEAYGKGGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNKFKEAEEVFDKLLNDE 240
Query: 796 KSPLKPDQKMFNMMIYMYRKAGSYEKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 975
KSPL+PDQKMFNMMIYMY+K+GS+EKAR+TFALMAERGI+++TVTYNSLMSFETNYKEVS
Sbjct: 241 KSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMSFETNYKEVS 300
Query: 976 NIYDQMQRADVRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAF 1155
NIYDQMQRAD+RPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAF
Sbjct: 301 NIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAF 360
Query: 1156 SISGMVDQARTVFKSMRRDKYFPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGIEPNV 1335
SISGMV+QAR VFKSMRRDKY PDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDG EPNV
Sbjct: 361 SISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNV 420
Query: 1336 VTYGTLIKGYAKSNDLEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVHWFKE 1515
VTYGTLIKGYAK+ND+EKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAV+WFKE
Sbjct: 421 VTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVNWFKE 480
Query: 1516 MESSGVPPDQKAKNVLLSLARTEEEKIEVNELVQHSIENNNLLKAN 1653
M +G+ PDQKAKN+LLSLA+TEE+ E NELV HSIE NNL K N
Sbjct: 481 MALNGLLPDQKAKNILLSLAKTEEDIKEANELVLHSIEINNLPKVN 526
>ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
[Glycine max]
Length = 562
Score = 852 bits (2200), Expect(2) = 0.0
Identities = 424/531 (79%), Positives = 473/531 (89%), Gaps = 1/531 (0%)
Frame = +1
Query: 82 MYSFVSKSHCHLGQ-FPFPPLHTGKLEYGIAKVKMGGRMEVVCKGMLAPXXXXXXXXXXX 258
M S +SKSHCHL Q P P TG GIA+V+M GRMEVVC+GML P
Sbjct: 1 MCSLISKSHCHLRQQLPLQPTRTGN---GIARVRMSGRMEVVCRGMLKPRKFMQRRRKFE 57
Query: 259 XXXDAADEAYQKNWWKLMNQIDETGSAVSVLSSEMMKNQTIPKDLVIGTLIRFKQLQKWN 438
D+ADEA QKNW ++M +I+E+GSAVSVLS+E + NQ IPKDLV+GTLIRFKQL+KWN
Sbjct: 58 VFKDSADEADQKNWRRIMTEIEESGSAVSVLSAEKINNQNIPKDLVVGTLIRFKQLKKWN 117
Query: 439 LVAETLEWLWTQSWWNFGKMDFFMLITAYGKLGDFNGAEKVLALMNKNGYASNVVSQTAL 618
LV E LEWL TQ+WW+FGKMDFFMLITAYGKLGDFNGAEKVL LMNKNGYA NVVSQTAL
Sbjct: 118 LVVEILEWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTAL 177
Query: 619 MEAYGRGGKYNNAEAIFRRMQRFGPEPSALTYQIILKTFVRGDKFKEAEEVFNNLLDDEK 798
MEAYG+GG+YNNAEAIFRRMQ++GPEPSA TYQIILKTFV+G+KF+EAEE+F+NLL+DE
Sbjct: 178 MEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDEN 237
Query: 799 SPLKPDQKMFNMMIYMYRKAGSYEKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 978
SPLKPDQKMFNMMIYM++KAGSYEKARKTFA MAE GI+Q+TVTYNSLMSFETNYKEVSN
Sbjct: 238 SPLKPDQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSFETNYKEVSN 297
Query: 979 IYDQMQRADVRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFS 1158
IYDQMQRAD+RPDVVSYALL++AYGKARREEEALAVFEEMLDAG+RPTRKAYNILLDAFS
Sbjct: 298 IYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFS 357
Query: 1159 ISGMVDQARTVFKSMRRDKYFPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGIEPNVV 1338
ISGMV+QA+TVFKSMRRD+YFPDLCSYTTMLSAY+NA DMEGAEKFFKRLIQDG EPNVV
Sbjct: 358 ISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVV 417
Query: 1339 TYGTLIKGYAKSNDLEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVHWFKEM 1518
TYGTLIKGYAK NDLE VM+KYEEML RGIKANQTILTTIMDA+GK+GDFDSAVHWFKEM
Sbjct: 418 TYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEM 477
Query: 1519 ESSGVPPDQKAKNVLLSLARTEEEKIEVNELVQHSIENNNLLKANGAVRFV 1671
ES+G+PPDQKAKNVLLSLA+T+EE+ E NELV H EN++L K NG V+ V
Sbjct: 478 ESNGIPPDQKAKNVLLSLAKTDEEREEANELVVHFSENSSLPKVNGIVKLV 528
Score = 33.5 bits (75), Expect(2) = 0.0
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 1785 DNYEYFDAQLGRAYDEQS 1838
DNYEYFDAQL RAY+ +
Sbjct: 535 DNYEYFDAQLARAYEHST 552
>ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
[Glycine max]
Length = 553
Score = 854 bits (2206), Expect(2) = 0.0
Identities = 424/530 (80%), Positives = 471/530 (88%)
Frame = +1
Query: 82 MYSFVSKSHCHLGQFPFPPLHTGKLEYGIAKVKMGGRMEVVCKGMLAPXXXXXXXXXXXX 261
M S +SKSHCHL Q P P TG GIA V+M GRMEVVC+GML P
Sbjct: 1 MCSLISKSHCHLRQLPLPHTRTGN---GIASVRMSGRMEVVCRGMLKPRKFMQRRRKFEV 57
Query: 262 XXDAADEAYQKNWWKLMNQIDETGSAVSVLSSEMMKNQTIPKDLVIGTLIRFKQLQKWNL 441
DAADEA QKNW ++M +I+E+GSAVSVLSSE + NQ IPKDL++GTLIRFKQL+KW+L
Sbjct: 58 FKDAADEADQKNWRRIMTEIEESGSAVSVLSSEKINNQNIPKDLLVGTLIRFKQLKKWHL 117
Query: 442 VAETLEWLWTQSWWNFGKMDFFMLITAYGKLGDFNGAEKVLALMNKNGYASNVVSQTALM 621
V E L+WL TQ+WW+FGKMDFFMLITAYGKLGDFNGAEKVL LMNKNGY NVVSQTALM
Sbjct: 118 VVEILDWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYVPNVVSQTALM 177
Query: 622 EAYGRGGKYNNAEAIFRRMQRFGPEPSALTYQIILKTFVRGDKFKEAEEVFNNLLDDEKS 801
EAYG+GG+YNNAEAIFRRMQ++GPEPSA TYQIILKTFV+G+K++EAEE+F+NLL+DE S
Sbjct: 178 EAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENS 237
Query: 802 PLKPDQKMFNMMIYMYRKAGSYEKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 981
PLKPDQKMFNMMIYMY+KAGSYEKARKTFALMAERGI+Q+TVTYNSLMSFET+YKEVSNI
Sbjct: 238 PLKPDQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLMSFETDYKEVSNI 297
Query: 982 YDQMQRADVRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSI 1161
YDQMQRAD+RPDVVSYALL++AYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSI
Sbjct: 298 YDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSI 357
Query: 1162 SGMVDQARTVFKSMRRDKYFPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGIEPNVVT 1341
SGMV+QA+TVFKSMRRD+YFPDLCSYTTMLSAYVNA DMEGAEKFFKRLIQD EPNVVT
Sbjct: 358 SGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVT 417
Query: 1342 YGTLIKGYAKSNDLEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVHWFKEME 1521
YGTLIKGYAK NDLE VM+KYEEML RGIKANQTILTTIMDA+GK+GDFDSAVHWFKEME
Sbjct: 418 YGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEME 477
Query: 1522 SSGVPPDQKAKNVLLSLARTEEEKIEVNELVQHSIENNNLLKANGAVRFV 1671
S+G+PPDQKAKNVLLSL +T+EE+ E NELV H ENN+L K NG V+ V
Sbjct: 478 SNGIPPDQKAKNVLLSLPKTDEEREEANELVGHFSENNSLSKVNGIVKLV 527
Score = 28.5 bits (62), Expect(2) = 0.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 1785 DNYEYFDAQLGRAYDEQS 1838
+ YEYFDAQL RAY+ +
Sbjct: 533 NKYEYFDAQLERAYEHST 550
>ref|XP_002298285.1| predicted protein [Populus trichocarpa] gi|222845543|gb|EEE83090.1|
predicted protein [Populus trichocarpa]
Length = 575
Score = 719 bits (1855), Expect = 0.0
Identities = 365/501 (72%), Positives = 418/501 (83%)
Frame = +1
Query: 166 IAKVKMGGRMEVVCKGMLAPXXXXXXXXXXXXXXDAADEAYQKNWWKLMNQIDETGSAVS 345
IA +K+ R+EVV GML+P DA+DEA QKNW +LM QI++TGSAVS
Sbjct: 7 IANIKIHRRLEVVSMGMLSPRKFLQKRRKVEVFKDASDEADQKNWRRLMKQIEDTGSAVS 66
Query: 346 VLSSEMMKNQTIPKDLVIGTLIRFKQLQKWNLVAETLEWLWTQSWWNFGKMDFFMLITAY 525
VL E +K +P+DLV+GTL+RFKQL+KW+LV+E LEWL +Q WW+F +MDF MLITAY
Sbjct: 67 VLRRERIKKDGLPRDLVLGTLVRFKQLKKWDLVSEILEWLQSQHWWDFNEMDFLMLITAY 126
Query: 526 GKLGDFNGAEKVLALMNKNGYASNVVSQTALMEAYGRGGKYNNAEAIFRRMQRFGPEPSA 705
GKLGDFNGAE VL MN NGY NVVS TALMEAYGRGG+YNNAEAIFRRMQ GPEPSA
Sbjct: 127 GKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSA 186
Query: 706 LTYQIILKTFVRGDKFKEAEEVFNNLLDDEKSPLKPDQKMFNMMIYMYRKAGSYEKARKT 885
LTYQIILKTFV G+KFKEAEEVF LL+ E SPL+PDQKMF+MMIYM +KAG+YEKARK
Sbjct: 187 LTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKV 246
Query: 886 FALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQMQRADVRPDVVSYALLINAYGKARR 1065
FALMAERG+ QSTVTYNSLMSFETNYKEVS IYDQMQR+ +RPDVVSYALLI AYG+ARR
Sbjct: 247 FALMAERGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARR 306
Query: 1066 EEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVDQARTVFKSMRRDKYFPDLCSYTT 1245
EEEALAVFEEMLDAGVRP+ KAYNILLDAF+ISGMV+QAR VFKSMRRD+ PDLCSYTT
Sbjct: 307 EEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTT 366
Query: 1246 MLSAYVNAPDMEGAEKFFKRLIQDGIEPNVVTYGTLIKGYAKSNDLEKVMEKYEEMLGRG 1425
MLSAYVNA DMEGAE FFKRL QDG++PNVVTYG LIKG+AK N+LEK+ME YEEM
Sbjct: 367 MLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNS 426
Query: 1426 IKANQTILTTIMDAHGKNGDFDSAVHWFKEMESSGVPPDQKAKNVLLSLARTEEEKIEVN 1605
IKANQTILTTIMDA+GKN DF SAV W+KEME GVPPDQKA+N+LLSLA+T++E+ E +
Sbjct: 427 IKANQTILTTIMDAYGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQKEAS 486
Query: 1606 ELVQHSIENNNLLKANGAVRF 1668
+LV + ++ + NGA RF
Sbjct: 487 QLVGYP-DDCGIQSINGASRF 506
>ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
[Cucumis sativus]
Length = 580
Score = 713 bits (1841), Expect = 0.0
Identities = 358/490 (73%), Positives = 413/490 (84%)
Frame = +1
Query: 169 AKVKMGGRMEVVCKGMLAPXXXXXXXXXXXXXXDAADEAYQKNWWKLMNQIDETGSAVSV 348
+ V + ++ V C GML P D ADEA QKNW +LMN+I+ETGSAVSV
Sbjct: 30 SNVNVRRKLVVTCMGMLTPRKFLQKRKKLEVFKDEADEAEQKNWRRLMNEIEETGSAVSV 89
Query: 349 LSSEMMKNQTIPKDLVIGTLIRFKQLQKWNLVAETLEWLWTQSWWNFGKMDFFMLITAYG 528
L SE +KN+ IPKDLV+GTL+RFKQL+KWNLV+E LEWL TQSWWNF +MDF MLITAYG
Sbjct: 90 LRSERIKNEAIPKDLVLGTLVRFKQLKKWNLVSEILEWLRTQSWWNFSEMDFVMLITAYG 149
Query: 529 KLGDFNGAEKVLALMNKNGYASNVVSQTALMEAYGRGGKYNNAEAIFRRMQRFGPEPSAL 708
KLGDFN AEKVL LMNK GYA NVVS TALMEAYGRG +YNNAEAIFRRMQ GPEPSAL
Sbjct: 150 KLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSAL 209
Query: 709 TYQIILKTFVRGDKFKEAEEVFNNLLDDEKSPLKPDQKMFNMMIYMYRKAGSYEKARKTF 888
TYQI+LKTFV G KFKEAEE+F++LL+ EK LKPDQKMF+M+IYM++KAG+YEKARK F
Sbjct: 210 TYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVF 269
Query: 889 ALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQMQRADVRPDVVSYALLINAYGKARRE 1068
A MA RG+ Q+TVTYNSLMSFETNYKEVS IYDQMQRA ++PDVVSYALLI+AYGKARRE
Sbjct: 270 AEMAARGVPQTTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARRE 329
Query: 1069 EEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVDQARTVFKSMRRDKYFPDLCSYTTM 1248
EEALAVFEEMLDAG+RPT KAYNILLDAF+ISGMV+QA+ VFKSM+RD+ PD+CSYTTM
Sbjct: 330 EEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTM 389
Query: 1249 LSAYVNAPDMEGAEKFFKRLIQDGIEPNVVTYGTLIKGYAKSNDLEKVMEKYEEMLGRGI 1428
LSAYVNA DMEGAE FF+RL QDG PNVVTYGTLIKGYAK N+LEK++++YEEM GI
Sbjct: 390 LSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGI 449
Query: 1429 KANQTILTTIMDAHGKNGDFDSAVHWFKEMESSGVPPDQKAKNVLLSLARTEEEKIEVNE 1608
+ NQTILTTIMDA+GKN DF SAV WF E+ES G+ PDQKAKN+LLSLA+T EE E N+
Sbjct: 450 RVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLSLAKTAEELDEANQ 509
Query: 1609 LVQHSIENNN 1638
LV +S ++++
Sbjct: 510 LVGYSSQSSS 519