BLASTX nr result

ID: Glycyrrhiza23_contig00003923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003923
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612548.1| hypothetical protein MTR_5g026290 [Medicago ...   160   1e-37
emb|CAN76940.1| hypothetical protein VITISV_042904 [Vitis vinifera]    58   1e-06

>ref|XP_003612548.1| hypothetical protein MTR_5g026290 [Medicago truncatula]
           gi|355513883|gb|AES95506.1| hypothetical protein
           MTR_5g026290 [Medicago truncatula]
           gi|388503050|gb|AFK39591.1| unknown [Medicago
           truncatula]
          Length = 135

 Score =  160 bits (406), Expect = 1e-37
 Identities = 87/140 (62%), Positives = 104/140 (74%), Gaps = 8/140 (5%)
 Frame = +1

Query: 115 MASQLVSDVRCQRLKHYAASYGERGSNGGKTTCTLSRRQSFGYHRIGKSRGIHPEDNNFR 294
           MASQLVSDV+CQ L H AASYGERGS       T SRR+S+GY RI K+  I+PE++NF+
Sbjct: 1   MASQLVSDVKCQTLMHCAASYGERGSKP-----TPSRRKSYGYRRIEKNSIIYPEESNFK 55

Query: 295 ENNKLGTKLAR--------QQAQKLHRLGFSYLASSVIYIVTKVKAFYNGFLGDVASDSR 450
           E+   G+ L +         QAQKLHRLGFSY+A+S +YIV KVK FYNGFLGDVAS+SR
Sbjct: 56  EHKNKGSSLEKGTKRSTNLAQAQKLHRLGFSYIATSFLYIVIKVKEFYNGFLGDVASESR 115

Query: 451 MGIGEAPMAEAYFSVPVLPN 510
           M   +APMAE YFSVPV+PN
Sbjct: 116 MMGIDAPMAEPYFSVPVIPN 135


>emb|CAN76940.1| hypothetical protein VITISV_042904 [Vitis vinifera]
          Length = 118

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
 Frame = +1

Query: 262 RGIHPEDNNFRENNKLGTKLARQ--------------QAQKLHRLGFSYLASSVIYIVTK 399
           RG H +  N+ +    G K   +              + Q+LH+LGFSYLASS+   ++K
Sbjct: 17  RGNHVKVENYSDERMKGAKAGNKPWPAELIQRHRRGHRTQELHQLGFSYLASSLRXFLSK 76

Query: 400 VKAFYNGFLGDVASDSRMGIGEAPMAEAYFSVPVLP 507
            K FYN F  + A D+ MG  E  + + YFS PV+P
Sbjct: 77  AKXFYNRFFLE-AIDNPMGRTEVMLVDPYFSFPVVP 111


Top