BLASTX nr result

ID: Glycyrrhiza23_contig00003896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003896
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...    79   3e-13
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]    79   5e-13
ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267...    77   1e-12
gb|ADL36626.1| C2H2L domain class transcription factor [Malus x ...    77   1e-12
ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/52 (80%), Positives = 44/52 (84%)
 Frame = -3

Query: 197 MDKISERETHDLMNVESFSQLPFIRPAPPAMKEKGIRLFGIEFGGNGAGATD 42
           MDK SERETHD MNVESFSQLPFIRPAP  +KEK IRLFGIEFGGN + A D
Sbjct: 1   MDK-SERETHDFMNVESFSQLPFIRPAP--VKEKSIRLFGIEFGGNDSAAGD 49


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = -3

Query: 200 LMDKISERETHDLMNVESFSQLPFIRPAPPAMKEKGIRLFGIEFGGN 60
           LMDK +ERETHD MNVESFSQLPFIRPAP  +KEKGIRLFG EFGG+
Sbjct: 32  LMDKATERETHDFMNVESFSQLPFIRPAP--VKEKGIRLFGKEFGGH 76


>ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera]
          Length = 238

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = -3

Query: 197 MDKISERETHDLMNVESFSQLPFIRPAPPAMKEKGIRLFGIEFGGN 60
           MDK +ERETHD MNVESFSQLPFIRPAP  +KEKGIRLFG EFGG+
Sbjct: 1   MDKATERETHDFMNVESFSQLPFIRPAP--VKEKGIRLFGKEFGGH 44


>gb|ADL36626.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 272

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = -3

Query: 197 MDKISERETHDLMNVESFSQLPFIRPAPPAMKEKGIRLFGIEFGGNGA 54
           MDK+ ERET D MNVESFSQLPFIRPAPP  KEKGIRLFGIEFG + A
Sbjct: 1   MDKV-ERETQDFMNVESFSQLPFIRPAPPLNKEKGIRLFGIEFGTDTA 47


>ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -3

Query: 197 MDKISERETHDLMNVESFSQLPFIRPAPPAMKEKGIRLFGIEFGGN 60
           MDK+ ERETHD MNVESFSQLPFIRPAP  +KEKGIRLFGIEFG N
Sbjct: 1   MDKV-ERETHDFMNVESFSQLPFIRPAP--IKEKGIRLFGIEFGSN 43


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