BLASTX nr result

ID: Glycyrrhiza23_contig00003889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003889
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611349.1| RING-H2 finger protein ATL1E [Medicago trunc...   352   8e-95
ref|XP_003538750.1| PREDICTED: RING-H2 finger protein ATL22-like...   323   5e-86
ref|XP_003516656.1| PREDICTED: uncharacterized protein LOC100790...   323   5e-86
gb|AFK41658.1| unknown [Lotus japonicus]                              320   3e-85
emb|CAN68814.1| hypothetical protein VITISV_001086 [Vitis vinifera]   227   3e-57

>ref|XP_003611349.1| RING-H2 finger protein ATL1E [Medicago truncatula]
           gi|355512684|gb|AES94307.1| RING-H2 finger protein ATL1E
           [Medicago truncatula]
          Length = 245

 Score =  352 bits (903), Expect = 8e-95
 Identities = 178/256 (69%), Positives = 202/256 (78%), Gaps = 2/256 (0%)
 Frame = +1

Query: 124 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQ--HDGALP 297
           M +L FL  F  FIFQ+        S +  ++   GP I +PFHIKGQQQ Q  +D  L 
Sbjct: 1   MNSLFFLTLFLAFIFQT--------SVNCNDI--PGPSIHYPFHIKGQQQQQQEYDTTLS 50

Query: 298 GFELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYY 477
           GFEL+ KDN TTIHFPSYGDLVVKSISYDTK+IDL+DPK C HRVFLNLNLTLTPF YYY
Sbjct: 51  GFELLHKDNITTIHFPSYGDLVVKSISYDTKKIDLLDPKNCVHRVFLNLNLTLTPFQYYY 110

Query: 478 VLKNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPY 657
           VLKN+TYLNCST L    FIEVPCLS S+YHVYTVDP LP+PSSCK+VKT+AIPFKYSPY
Sbjct: 111 VLKNFTYLNCSTRLSQTKFIEVPCLSDSSYHVYTVDPELPMPSSCKKVKTIAIPFKYSPY 170

Query: 658 LSDNDSLGLRLTWDLRESEDSKEGNQTRDSHTIRYTVLGLSIFVIVMATLLSKKVHVSTR 837
           +SDN SLGLRLTWDLRESE+SKE N+TRDSH  RYTVLG+ I + V+ATL+  KVH+S R
Sbjct: 171 ISDN-SLGLRLTWDLRESEESKEWNKTRDSHIARYTVLGVGICIFVVATLVGIKVHLSRR 229

Query: 838 NLHKKEGQLLQGLADV 885
           N HKKEG LL  +ADV
Sbjct: 230 NFHKKEGPLLHSVADV 245


>ref|XP_003538750.1| PREDICTED: RING-H2 finger protein ATL22-like [Glycine max]
          Length = 242

 Score =  323 bits (827), Expect = 5e-86
 Identities = 174/251 (69%), Positives = 195/251 (77%), Gaps = 2/251 (0%)
 Frame = +1

Query: 124 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQHDGALPGF 303
           M A IFL    VF FQS   +VTY+    T+ GDAGP+I +P+ IKGQQQ Q+D AL GF
Sbjct: 1   MDAFIFLFLLCVFCFQS---KVTYS----TKCGDAGPEIHYPYQIKGQQQQQND-ALSGF 52

Query: 304 ELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYYVL 483
           EL+ KDN TTIHFPSYG+LVVKSISYDTK I L+DP  CAHRVFLNLNL+LTPFHY+YVL
Sbjct: 53  ELLCKDNLTTIHFPSYGNLVVKSISYDTKNIHLLDPNNCAHRVFLNLNLSLTPFHYFYVL 112

Query: 484 KNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPYLS 663
           KNYTYLNCSTTLP P F+EVPCLS S+YHVYTVDPA+PVP SC+ VKTVAIPF YSPYLS
Sbjct: 113 KNYTYLNCSTTLPRP-FVEVPCLSASSYHVYTVDPAVPVPGSCEGVKTVAIPFAYSPYLS 171

Query: 664 DNDSLGLRLTWDLRESEDSKEGNQTRDSHTIRYTVLGLSIFVIVMATLL--SKKVHVSTR 837
           D  SLGLRLTW LRE E ++  N  R SH  R  V+G SI V VMA LL  S KV  +TR
Sbjct: 172 DK-SLGLRLTWHLRELEGNEAVNLNRSSHKSRNIVIGFSICVFVMAMLLLISIKVRGATR 230

Query: 838 NLHKKEGQLLQ 870
           NLH+KE QLLQ
Sbjct: 231 NLHQKEEQLLQ 241


>ref|XP_003516656.1| PREDICTED: uncharacterized protein LOC100790327 [Glycine max]
          Length = 242

 Score =  323 bits (827), Expect = 5e-86
 Identities = 177/252 (70%), Positives = 196/252 (77%), Gaps = 3/252 (1%)
 Frame = +1

Query: 124 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQHDGALPGF 303
           MGA IFL    VF FQS   +VTYA    T  GDAGP+I +P+ IKGQQQ QH  +LPGF
Sbjct: 1   MGAFIFLFLLCVFCFQS---KVTYA----TRCGDAGPEIHYPYQIKGQQQ-QHK-SLPGF 51

Query: 304 ELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYYVL 483
           EL+ KDN TTIHFPSYGDLVVKSISYDTK I L+DPK CAH VFLNLNL+LTPFHY+YVL
Sbjct: 52  ELLCKDNLTTIHFPSYGDLVVKSISYDTKNIHLLDPKNCAHHVFLNLNLSLTPFHYFYVL 111

Query: 484 KNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPYLS 663
           KNYTYLNCSTTLP P  +EVPCLS S+YHVYTVDPA+PVP SC  VKTVAIPF YSPYLS
Sbjct: 112 KNYTYLNCSTTLPHP-LVEVPCLSASSYHVYTVDPAVPVPGSCDGVKTVAIPFAYSPYLS 170

Query: 664 DNDSLGLRLTWDLRESEDSKEG-NQTRDSHTIRYTVLGLSIFVIVMATLL--SKKVHVST 834
           D  SLGLRLTW LRE  D++   N+TR S+  R  V+G SI V VMA LL  S KV  +T
Sbjct: 171 DK-SLGLRLTWHLREPLDNEAAVNRTRGSYKSRNIVIGSSICVFVMAMLLLISMKVRGAT 229

Query: 835 RNLHKKEGQLLQ 870
           RNLH+KEGQLLQ
Sbjct: 230 RNLHQKEGQLLQ 241


>gb|AFK41658.1| unknown [Lotus japonicus]
          Length = 234

 Score =  320 bits (820), Expect = 3e-85
 Identities = 171/253 (67%), Positives = 191/253 (75%)
 Frame = +1

Query: 124 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQHDGALPGF 303
           M A IFLI FWVF F     EVT+AS          PDI +PFHIKG+Q PQHD     F
Sbjct: 1   MAAPIFLILFWVFTFSCSVFEVTHAS----------PDIHYPFHIKGKQ-PQHDSH---F 46

Query: 304 ELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYYVL 483
           EL++++ TTTIHFPSYGDL+V SISYDTK I L DPK C HRVF+NLNLTLTPF YYYVL
Sbjct: 47  ELLQENTTTTIHFPSYGDLLVNSISYDTKNIYLADPKNCPHRVFMNLNLTLTPFQYYYVL 106

Query: 484 KNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPYLS 663
           KNYTYLNCST L  P FIE+PCLS S+YHVYTVDPALPVP SCK +KTVAIPFKYSPY S
Sbjct: 107 KNYTYLNCSTKLSSP-FIEIPCLSDSSYHVYTVDPALPVPGSCKGIKTVAIPFKYSPYRS 165

Query: 664 DNDSLGLRLTWDLRESEDSKEGNQTRDSHTIRYTVLGLSIFVIVMATLLSKKVHVSTRNL 843
           DN S GLRLTWDL +S +  EGNQTRDS+   Y V+G+ I V+VM TL+S KVHVS R+ 
Sbjct: 166 DN-SFGLRLTWDLHDSRE--EGNQTRDSYMTHYAVVGVIICVLVMVTLVSIKVHVSRRDF 222

Query: 844 HKKEGQLLQGLAD 882
            KKE QLL  LAD
Sbjct: 223 DKKERQLL--LAD 233


>emb|CAN68814.1| hypothetical protein VITISV_001086 [Vitis vinifera]
          Length = 406

 Score =  227 bits (579), Expect = 3e-57
 Identities = 123/220 (55%), Positives = 150/220 (68%), Gaps = 8/220 (3%)
 Frame = +1

Query: 220 GDAGPDIRFPFHIKGQQQPQHDGALPGFELIRKDNTTTIHFPSYGDLVVKSISYDTKRID 399
           GD  PDIRFPF +KGQQ PQH G  PGFEL+ K+N+T I FPSYGDLV++SISYD K+++
Sbjct: 163 GDGAPDIRFPFRLKGQQ-PQHCG-YPGFELVCKENSTMIQFPSYGDLVIQSISYDMKKLN 220

Query: 400 LVDPKKCAHRVFLNLNLTLTPFHYYYVLKNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYT 579
           L+DPK C H VFLNLNL+LTPF YYY +KNYTYLNCS  L  P+F  VPCLSGS YHVYT
Sbjct: 221 LLDPKSCVHEVFLNLNLSLTPFQYYYHVKNYTYLNCSAQL-SPSFAPVPCLSGSQYHVYT 279

Query: 580 VDPALPVPSSCKEVKTVAIPFKYSPYLSDNDSLGLRLTWDLRESED--------SKEGNQ 735
           V+ +     SC  +KT+AIPF YSPYLSDN + GL LTW L    +        SK G+Q
Sbjct: 280 VESSXASRLSCMPMKTIAIPFPYSPYLSDN-TFGLGLTWTLPGCNEKGGHCNLQSKTGDQ 338

Query: 736 TRDSHTIRYTVLGLSIFVIVMATLLSKKVHVSTRNLHKKE 855
           T   +    T     IF  ++A L+S K+H S +   +KE
Sbjct: 339 TSCFNKGLIT----GIFAFIVAILISIKIHNSKKLNGQKE 374


Top