BLASTX nr result

ID: Glycyrrhiza23_contig00003883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003883
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240854.1| uncharacterized protein LOC100786039 [Glycin...   137   1e-30
gb|ACJ85064.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_003622461.1| Protein BPS1 [Medicago truncatula] gi|355497...   117   1e-24
ref|XP_003552412.1| PREDICTED: protein BPS1, chloroplastic-like ...   107   8e-22
ref|XP_003624050.1| Protein BPS1 [Medicago truncatula] gi|355499...   107   8e-22

>ref|NP_001240854.1| uncharacterized protein LOC100786039 [Glycine max]
           gi|255634751|gb|ACU17737.1| unknown [Glycine max]
          Length = 354

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = -1

Query: 221 MSHSQDPHPPRSFFPFGNPFRMISPKGSRMSPQLVAVLQAFEATLAERLKKLMPKSKEEI 42
           MS SQDPHP RSFFPFGNPFRMISPKGSRMSPQL+AVLQAFEATLAERLK LMPKSK+EI
Sbjct: 1   MSRSQDPHPSRSFFPFGNPFRMISPKGSRMSPQLLAVLQAFEATLAERLKNLMPKSKDEI 60

Query: 41  LSLSWMTLAMKSL 3
           L+LSWMTLAMKSL
Sbjct: 61  LTLSWMTLAMKSL 73


>gb|ACJ85064.1| unknown [Medicago truncatula]
          Length = 358

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/74 (82%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 MSHSQDPHPPRSFFPFGNPFRMISPKG-SRMSPQLVAVLQAFEATLAERLKKLMPKSKEE 45
           MS SQDPHP RSFFPFGNPFR  S KG S MSPQL+AVL  FEATLAERL+KLMPKSK+E
Sbjct: 1   MSRSQDPHPNRSFFPFGNPFRTKSHKGGSHMSPQLLAVLHGFEATLAERLRKLMPKSKDE 60

Query: 44  ILSLSWMTLAMKSL 3
           ILSL+WMTLAMKSL
Sbjct: 61  ILSLAWMTLAMKSL 74


>ref|XP_003622461.1| Protein BPS1 [Medicago truncatula] gi|355497476|gb|AES78679.1|
           Protein BPS1 [Medicago truncatula]
          Length = 358

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/74 (81%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 MSHSQDPHPPRSFFPFGNPFRMISPKG-SRMSPQLVAVLQAFEATLAERLKKLMPKSKEE 45
           M  SQDPHP RSFFPFGNPFR  S KG S MSPQL+AVL  FEATLAERL+KLMPKSK+E
Sbjct: 1   MDRSQDPHPNRSFFPFGNPFRTKSHKGGSHMSPQLLAVLHGFEATLAERLRKLMPKSKDE 60

Query: 44  ILSLSWMTLAMKSL 3
           ILSL+WMTLAMKSL
Sbjct: 61  ILSLAWMTLAMKSL 74


>ref|XP_003552412.1| PREDICTED: protein BPS1, chloroplastic-like [Glycine max]
          Length = 350

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 MSHSQDPHPPRSFFPFGNPFRMISPKGSRMSPQLVAVLQAFEATLAERLKKLMPKSKEEI 42
           MS +QD +  RSFFPFGNPFRMISPKG ++S QL+ +L AFEATL ERLKKL+PKSK+EI
Sbjct: 1   MSRAQDAN--RSFFPFGNPFRMISPKGPKISSQLLLILHAFEATLEERLKKLIPKSKDEI 58

Query: 41  LSLSWMTLAMKSL 3
           LSLSWMTLAM++L
Sbjct: 59  LSLSWMTLAMQAL 71


>ref|XP_003624050.1| Protein BPS1 [Medicago truncatula] gi|355499065|gb|AES80268.1|
           Protein BPS1 [Medicago truncatula]
          Length = 431

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/73 (71%), Positives = 63/73 (86%)
 Frame = -1

Query: 221 MSHSQDPHPPRSFFPFGNPFRMISPKGSRMSPQLVAVLQAFEATLAERLKKLMPKSKEEI 42
           MS  QDP  PRSFFPFGNPFRMI+PKG+++ PQL+AVL  FEATL ERLK L+PKSK+E+
Sbjct: 1   MSRPQDP--PRSFFPFGNPFRMIAPKGTKLPPQLLAVLSDFEATLEERLKNLIPKSKDEV 58

Query: 41  LSLSWMTLAMKSL 3
           +SLSWMT AM++L
Sbjct: 59  VSLSWMTSAMQAL 71


Top