BLASTX nr result

ID: Glycyrrhiza23_contig00003861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003861
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago trun...   169   1e-39
gb|AFK46395.1| unknown [Lotus japonicus]                              166   7e-39
gb|ACU18771.1| unknown [Glycine max]                                  164   3e-38
ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycin...   162   1e-37
ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putati...   157   6e-36

>ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago truncatula]
           gi|355513595|gb|AES95218.1| Scaffold attachment factor
           B1 [Medicago truncatula]
          Length = 303

 Score =  169 bits (428), Expect = 1e-39
 Identities = 84/104 (80%), Positives = 87/104 (83%)
 Frame = +2

Query: 320 RTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSV 499
           R+ DRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD+ 
Sbjct: 123 RSPDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTA 182

Query: 500 EDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXXGHYLGLKNT 631
           EDANRCIKYLNQS+LEGRYI               GHYLGLKNT
Sbjct: 183 EDANRCIKYLNQSILEGRYITVERSKRKRPRTPTPGHYLGLKNT 226


>gb|AFK46395.1| unknown [Lotus japonicus]
          Length = 268

 Score =  166 bits (421), Expect = 7e-39
 Identities = 94/184 (51%), Positives = 100/184 (54%)
 Frame = +2

Query: 326 EDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSVED 505
           EDRNGG+TLYVTGLSSRVTERDLEEHF+KEGKVASCFLVVEPRTRISRGFAF+TMD+VED
Sbjct: 85  EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVED 144

Query: 506 ANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXXGHYLGLKNTXXXXXXXXXXXXXXXXXX 685
           ANRC+KYLNQSVLEGRYI               GHYLGLK+T                  
Sbjct: 145 ANRCVKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSTRDRDYGHRGGDRGRYRGG 204

Query: 686 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPRHXXXXXXXXXXXXXXXXXXXXXGSPDRRYA 865
                                       PR                       SPDRRYA
Sbjct: 205 GGGGSGRDDYQHRRSPRRSPYRGGRDYSPRRSSPYAGSSRRERSRSLPYSPYASPDRRYA 264

Query: 866 RGSR 877
           RGSR
Sbjct: 265 RGSR 268


>gb|ACU18771.1| unknown [Glycine max]
          Length = 246

 Score =  164 bits (416), Expect = 3e-38
 Identities = 94/168 (55%), Positives = 100/168 (59%)
 Frame = +2

Query: 128 MADSPARRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKQXXXXXXXXXXXXXX 307
           MADSP RRNS                                 EKQ              
Sbjct: 1   MADSPPRRNS----RSPSPWRAESRSRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRS 56

Query: 308 XXHERTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVT 487
             +ER+E +N G TLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF+T
Sbjct: 57  RSNERSEAKNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFIT 116

Query: 488 MDSVEDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXXGHYLGLKNT 631
           MD+VEDANRCIKYLNQSVLEGRYI               GHYLGLK+T
Sbjct: 117 MDTVEDANRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKST 164


>ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycine max]
           gi|255629542|gb|ACU15118.1| unknown [Glycine max]
          Length = 238

 Score =  162 bits (410), Expect = 1e-37
 Identities = 82/106 (77%), Positives = 85/106 (80%)
 Frame = +2

Query: 314 HERTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 493
           H R+E  N GDTLYVTGLSSRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTM+
Sbjct: 61  HGRSEPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTME 120

Query: 494 SVEDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXXGHYLGLKNT 631
           S EDA RCIKYLNQSVLEGRYI               GHYLGLKNT
Sbjct: 121 SAEDAERCIKYLNQSVLEGRYITIERSRRKRARTPTPGHYLGLKNT 166


>ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223529816|gb|EEF31751.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 248

 Score =  157 bits (396), Expect = 6e-36
 Identities = 79/105 (75%), Positives = 85/105 (80%)
 Frame = +2

Query: 314 HERTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 493
           H RTE  N G+TLYVTGLS+RVTER LEEHF+KEGKVASCFLVVEPRTRISRGFAFVTMD
Sbjct: 64  HGRTEAVNPGNTLYVTGLSTRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMD 123

Query: 494 SVEDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXXGHYLGLKN 628
           +VEDANRC+KYLNQSVLEGRYI               GHYLGLK+
Sbjct: 124 NVEDANRCVKYLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKS 168


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