BLASTX nr result

ID: Glycyrrhiza23_contig00003834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003834
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629535.1| F-box protein [Medicago truncatula] gi|35552...   107   8e-22
ref|XP_003620263.1| F-box/kelch-repeat protein [Medicago truncat...   105   4e-21
ref|XP_003617943.1| LCR-like protein [Medicago truncatula] gi|35...   102   3e-20
ref|XP_003626159.1| F-box/kelch-repeat protein [Medicago truncat...   100   9e-20
ref|XP_003637795.1| hypothetical protein MTR_103s0018 [Medicago ...    99   5e-19

>ref|XP_003629535.1| F-box protein [Medicago truncatula] gi|355523557|gb|AET04011.1|
           F-box protein [Medicago truncatula]
          Length = 419

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/79 (64%), Positives = 59/79 (74%)
 Frame = +3

Query: 3   GVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGDELAWFDLRTQRIEELGIKGESW 182
           G+KESWTKLF +GPLPC V  PIG GMKG+IFF +   ELAWFDL TQ IEELG K +  
Sbjct: 331 GMKESWTKLFTMGPLPC-VDRPIGVGMKGEIFFIRKDKELAWFDLSTQMIEELGFKVDRP 389

Query: 183 RCNVVVYKESLLPIGGINN 239
            C + +YKES+LP  GINN
Sbjct: 390 GCRITIYKESILPFEGINN 408


>ref|XP_003620263.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355495278|gb|AES76481.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 418

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/79 (59%), Positives = 60/79 (75%)
 Frame = +3

Query: 3   GVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGDELAWFDLRTQRIEELGIKGESW 182
           G+KESWTKLFI+GPL CI  HPIG G+KG+IFF +  +EL WFDL TQ+IEELG K    
Sbjct: 341 GMKESWTKLFILGPLSCI-KHPIGVGIKGEIFFQRKDEELVWFDLSTQKIEELGYKARGC 399

Query: 183 RCNVVVYKESLLPIGGINN 239
              +++YKE +LPIGG ++
Sbjct: 400 STRIIIYKEYILPIGGASS 418


>ref|XP_003617943.1| LCR-like protein [Medicago truncatula] gi|355519278|gb|AET00902.1|
           LCR-like protein [Medicago truncatula]
          Length = 409

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/80 (65%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = +3

Query: 3   GVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGDELAWFDLRTQRIEELGIKGE-- 176
           GVKESW KLFIVGPLPC VH PIG G KG+IF  K  DELAW DL T  IEELG KG   
Sbjct: 330 GVKESWIKLFIVGPLPC-VHIPIGVGKKGEIFLRKKDDELAWIDLNTNTIEELGFKGNRY 388

Query: 177 SWRCNVVVYKESLLPIGGIN 236
           +WR  +V Y +SLLPI  I+
Sbjct: 389 NWRGQIVTYTKSLLPIERIS 408


>ref|XP_003626159.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501174|gb|AES82377.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/79 (67%), Positives = 58/79 (73%)
 Frame = +3

Query: 3   GVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGDELAWFDLRTQRIEELGIKGESW 182
           GVKESW KLFIVG L C V HPI  G  GDIFF K  DEL  F+L TQ+IEELG+KG S 
Sbjct: 290 GVKESWIKLFIVGSLSC-VDHPIRIGKTGDIFFRKEDDELVSFNLSTQKIEELGVKGYS- 347

Query: 183 RCNVVVYKESLLPIGGINN 239
            C ++VYKESLLPI  INN
Sbjct: 348 LCQIIVYKESLLPIARINN 366


>ref|XP_003637795.1| hypothetical protein MTR_103s0018 [Medicago truncatula]
           gi|355503730|gb|AES84933.1| hypothetical protein
           MTR_103s0018 [Medicago truncatula]
          Length = 379

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/77 (61%), Positives = 57/77 (74%)
 Frame = +3

Query: 9   KESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGDELAWFDLRTQRIEELGIKGESWRC 188
           +ESWTKLF++GPLPCI  HPIG G  GD+FF +   EL  F+L TQ I+ELG+KGE   C
Sbjct: 298 QESWTKLFVIGPLPCI-EHPIGEGKNGDLFFKRKDGELVRFNLSTQVIDELGLKGEFGCC 356

Query: 189 NVVVYKESLLPIGGINN 239
            +V YKES LPIG IN+
Sbjct: 357 QIVNYKESSLPIGQIND 373


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