BLASTX nr result

ID: Glycyrrhiza23_contig00003831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003831
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600727.1| HMG-Y-related protein A [Medicago truncatula...   197   3e-48
ref|XP_003552987.1| PREDICTED: HMG-Y-related protein A-like [Gly...   179   5e-43
ref|XP_003538393.1| PREDICTED: HMG-Y-related protein A-like [Gly...   174   3e-41
ref|XP_002302948.1| high mobility group family [Populus trichoca...   158   2e-36
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   143   6e-32

>ref|XP_003600727.1| HMG-Y-related protein A [Medicago truncatula]
           gi|355489775|gb|AES70978.1| HMG-Y-related protein A
           [Medicago truncatula]
          Length = 184

 Score =  197 bits (500), Expect = 3e-48
 Identities = 110/185 (59%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
 Frame = +2

Query: 125 MATGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 304
           MATG VINKPLSIPSY EMILKAIE LNEENGSNKSSISKYI+STYGGLPQGHK LLNLH
Sbjct: 1   MATGVVINKPLSIPSYREMILKAIEGLNEENGSNKSSISKYIESTYGGLPQGHKVLLNLH 60

Query: 305 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           LA+MRD+GELVFWKNNYTK                                         
Sbjct: 61  LARMRDSGELVFWKNNYTKRDPNAPPRRGRGRPPKAKESFSSGAMYSQPKPRGRPPKDPN 120

Query: 485 XXXXXXXVKASTGNGRPRGRPRKMARPTGGFGEAPPSTVGT---GRPRGRPPKMKSPTLM 655
                  +KA  G GRPRGRPRKM+RPTG F    P  +GT   GRPRGRPPKMKS TL 
Sbjct: 121 GPPKSPQMKAPVGTGRPRGRPRKMSRPTGAFDGPLPLALGTGGSGRPRGRPPKMKSTTL- 179

Query: 656 TEITA 670
            EI A
Sbjct: 180 AEINA 184


>ref|XP_003552987.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 182

 Score =  179 bits (455), Expect = 5e-43
 Identities = 102/186 (54%), Positives = 115/186 (61%), Gaps = 4/186 (2%)
 Frame = +2

Query: 125 MATGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 304
           MATG  INKP S+P YPEMIL+AIEALNE+NGSNKSSISKYI+STYGGLPQGHK LLN+H
Sbjct: 1   MATGVFINKPPSLPPYPEMILEAIEALNEDNGSNKSSISKYIESTYGGLPQGHKVLLNVH 60

Query: 305 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           LAKMRD+G LVFWKNNYTK                                         
Sbjct: 61  LAKMRDSGVLVFWKNNYTKRDPKAPPRRGRGRPPKPKEPLPPGTVLSPPRPKGRPPKDPN 120

Query: 485 XXXXXXXVKASTGNGRPRGRPRKMARPTGGFGEAPPST----VGTGRPRGRPPKMKSPTL 652
                   KA T +GRPRGRPRKM RPTGG  EA P++      +GRPRGRPPK+K   +
Sbjct: 121 DPGKPP--KALTESGRPRGRPRKMTRPTGGLSEASPASKVKASTSGRPRGRPPKVK--PV 176

Query: 653 MTEITA 670
            TEI+A
Sbjct: 177 FTEISA 182


>ref|XP_003538393.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 184

 Score =  174 bits (440), Expect = 3e-41
 Identities = 100/187 (53%), Positives = 115/187 (61%), Gaps = 6/187 (3%)
 Frame = +2

Query: 125 MATGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 304
           MATG+VINKP S+P YPEMI +AIEALNEENGSNKSSISKYI+STYGGLPQ HK LLN+H
Sbjct: 1   MATGQVINKPPSLPPYPEMIREAIEALNEENGSNKSSISKYIESTYGGLPQAHKVLLNVH 60

Query: 305 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           LAKMR++G LVFWKNNYTK                                         
Sbjct: 61  LAKMRESGVLVFWKNNYTK--RDPNAPPRRGRGRPPKPKEPLPPGTVLSPPRPRGRPSKD 118

Query: 485 XXXXXXXVKAS-TGNGRPRGRPRKMARPTGGFGEAPPST-----VGTGRPRGRPPKMKSP 646
                  +KAS  G+GRPRGRPRKMA PTGG GE   ++        GRPRGRPPK+K+ 
Sbjct: 119 PNDLQKPLKASVVGSGRPRGRPRKMAWPTGGLGEVSQASKAKPVTSNGRPRGRPPKVKA- 177

Query: 647 TLMTEIT 667
            + TEI+
Sbjct: 178 -VFTEIS 183


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  158 bits (399), Expect = 2e-36
 Identities = 89/180 (49%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
 Frame = +2

Query: 137 EVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLHLAKM 316
           E INKP S+P YPEMIL AIEALNE NG NK+SISKYI+S YG LP GH ALL+ HL +M
Sbjct: 4   EEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHLNRM 63

Query: 317 RDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 496
           +D GELVFWKNNY K                                             
Sbjct: 64  KDTGELVFWKNNYMKPDPNAPPRRGRGRPPKPKDPLSPGSDLPPARPRGRPPKDPNAPPK 123

Query: 497 XXXVKASTG-NGRPRGRPRKMARPTGGF-------GEAPPSTVGTGRPRGRPPKMKSPTL 652
               KA+TG +G+PRGRPRKMARPTGG          A P T G+GRPRGRPPK+K+ T+
Sbjct: 124 PVKPKAATGRSGKPRGRPRKMARPTGGITTGTATTTSAVPMTAGSGRPRGRPPKVKAATM 183


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  143 bits (360), Expect = 6e-32
 Identities = 83/181 (45%), Positives = 102/181 (56%)
 Frame = +2

Query: 125 MATGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 304
           MAT EV NKP S+P YPEM++KA++ALNE +GSNKS+ISKYI+STYG LP GH  LL  H
Sbjct: 1   MATEEV-NKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHH 59

Query: 305 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           L KM+D+GELVF KNNY K                                         
Sbjct: 60  LNKMKDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVLSPPRPRGRPPKDPN 119

Query: 485 XXXXXXXVKASTGNGRPRGRPRKMARPTGGFGEAPPSTVGTGRPRGRPPKMKSPTLMTEI 664
                   K STG+GRPRGRP+K+AR         P+ V +GRPRGRPPK+K    +TE+
Sbjct: 120 APPKSPKTKVSTGSGRPRGRPKKIARSPAA---VAPTPVPSGRPRGRPPKVKPQ--LTEV 174

Query: 665 T 667
           +
Sbjct: 175 S 175


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