BLASTX nr result
ID: Glycyrrhiza23_contig00003788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00003788
(2183 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycin... 720 0.0
emb|CBI28700.3| unnamed protein product [Vitis vinifera] 634 e-179
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm... 631 e-178
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera] 616 e-174
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif... 561 e-157
>ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycine max]
Length = 480
Score = 720 bits (1859), Expect = 0.0
Identities = 396/528 (75%), Positives = 415/528 (78%), Gaps = 11/528 (2%)
Frame = -2
Query: 1978 MDTVAGVQXXXXXXXSMAKRPCPLQNPR----GEVEHLLDEFLALSEMPSLSLDLSFEKL 1811
MD+ + V SM+KRPCP QNPR GEVE L+ FL+LS++ SLSLDLSFE+L
Sbjct: 1 MDSHSPVLTSTTSLSSMSKRPCPSQNPRAENLGEVERRLEAFLSLSDVASLSLDLSFERL 60
Query: 1810 LQSMP--ADSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQ 1637
LQS+P ADSDLIDRALKM SLLLDAAKHSSRKRASNHNSL+WPLPPDLTIKVFSMLDTQ
Sbjct: 61 LQSVPSDADSDLIDRALKMASLLLDAAKHSSRKRASNHNSLSWPLPPDLTIKVFSMLDTQ 120
Query: 1636 SLCYASATCSFFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPG 1457
SLCYASA CS FSKCAKDP+CYANLDLTTLVPKVNNAVVATM+QRAGKALRSLKLGVVPG
Sbjct: 121 SLCYASAACSLFSKCAKDPMCYANLDLTTLVPKVNNAVVATMVQRAGKALRSLKLGVVPG 180
Query: 1456 ATTP-GSCLPLTCTIRSAIGE-SNFSWNDKRSRQGRDSSVLILTRCCLSPLSGDGGAPGA 1283
ATT GSC P CTIR+AI E SNFSWNDKRSRQGR+SS ILTRCCLSPLSGDGGAPGA
Sbjct: 181 ATTSLGSCPPFACTIRNAIVEVSNFSWNDKRSRQGRESS--ILTRCCLSPLSGDGGAPGA 238
Query: 1282 LLRKLHLYNIERMDNASLGGALSACPSLLDLEIVGLHVELRQTLMSVSANCHFIERLFFE 1103
LLRKLHLYNIERMDNASLG ALSACPSLLDLEIVGLHVELRQTLMSVSANCH IERLFFE
Sbjct: 239 LLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFE 298
Query: 1102 SSKTGRDDSLKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRTLVKGFRKLKYVDFSTSYS 923
SSKTGRDDSLK QTC ELVNNCPHLTSLSLRGFKLHDCKVR LVK
Sbjct: 299 SSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVK--------------- 343
Query: 922 ITXXXXXXXXXXXXXXXLEVLILRDCMHLKEMEVSRLLTAILAGDFKLLMHLDISNREGL 743
MEV++LLTAILAGDFKLL+HLDISNREGL
Sbjct: 344 -------------------------------MEVAKLLTAILAGDFKLLVHLDISNREGL 372
Query: 742 ASEADWYHRCYNSSIMPIKQVLEARPDMRLVAEYP-PEGSYIETFDTDMNSDISLPSQFS 566
ASEADWYHRCYNSSIMPIKQVLEARPDM LVAEYP EGSYIETFD DMNS+ISLPSQ S
Sbjct: 373 ASEADWYHRCYNSSIMPIKQVLEARPDMCLVAEYPSAEGSYIETFDADMNSEISLPSQLS 432
Query: 565 SHTXXXXXXXXXXXXXXXXXXXSGNEDAQDA--VIYVESSDEIDFPAL 428
SHT SGNED QDA VIY ESSDEIDF +L
Sbjct: 433 SHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL 480
>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 634 bits (1635), Expect = e-179
Identities = 345/525 (65%), Positives = 394/525 (75%), Gaps = 24/525 (4%)
Frame = -2
Query: 1930 MAKRPCPLQN------------PR----GEVEHLLDEFLALSEMPSLSLDLSFEKLLQSM 1799
MAKRPC N PR ++E LL+ FL LS+ SL LSFEKLL S
Sbjct: 10 MAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSSGPSLHLSFEKLLDSR 69
Query: 1798 PADSD---LIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLC 1628
DSD LIDRAL++GS LL+A K S+RKRAS HNSL W LPPDLTIKVFSMLDTQSLC
Sbjct: 70 ACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLC 129
Query: 1627 YASATCSFFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGAT- 1451
Y +ATCS F KCA DPLCYAN+DLTT+VPKVNNAVV+TMIQRAGK L+SL+LG+VPG T
Sbjct: 130 YTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTL 189
Query: 1450 TPGSCLPLTCTIRSAIGESNFSWNDKRSRQGRDSSVLILTRCCLSPLSGDGGAPGALLRK 1271
+PGS PL TIR+++ + FSWNDKRSRQG++SS IL+R CL+ LSGD GA GALL++
Sbjct: 190 SPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESS--ILSRSCLTALSGDSGAAGALLKR 247
Query: 1270 LHLYNIERMDNASLGGALSACPSLLDLEIVGLHVELRQTLMSVSANCHFIERLFFESSKT 1091
LHLYNIERMDN +L ALSACPSLLDLEIVGLHVELRQTLMSVS NCH IERLFFESSKT
Sbjct: 248 LHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKT 307
Query: 1090 GRDDSLKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRTLVKGFRKLKYVDFSTSYSITXX 911
GRDDSLK+ TC +LVNNCPHLTSL+LRGFKLHD KVR LVKGF KLKYVDFSTSYSIT
Sbjct: 308 GRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKGFHKLKYVDFSTSYSITGT 367
Query: 910 XXXXXXXXXXXXXLEVLILRDCMHLKEMEVSRLLTAILAGDFKLLMHLDISNREGLASEA 731
LEVL+LRDCMHLKE+EV++ L+AI+AGDF+LL LDISNREGLASE
Sbjct: 368 FLRNLGSSTGGNLLEVLLLRDCMHLKEVEVAKFLSAIIAGDFRLLRLLDISNREGLASEG 427
Query: 730 DWYHRCYNSSIMPIKQVLEARPDMRLVAEYPPEGSY--IETFDTDMNSDISLPSQFSSHT 557
DWY+RCYNSS++PIKQV E RPD+ L+AE+P EGS IE +NSD SL SQ SSH+
Sbjct: 428 DWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHS 487
Query: 556 XXXXXXXXXXXXXXXXXXXSGNEDAQDA--VIYVESSDEIDFPAL 428
SGNED ++ VIY ESSDE+D A+
Sbjct: 488 SDSSVSMSSSESSYNSDQGSGNEDGRETGYVIYEESSDEVDILAV 532
>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
gi|223540114|gb|EEF41691.1| conserved hypothetical
protein [Ricinus communis]
Length = 515
Score = 631 bits (1627), Expect = e-178
Identities = 332/516 (64%), Positives = 393/516 (76%), Gaps = 18/516 (3%)
Frame = -2
Query: 1930 MAKRPCPLQNPRG---------EVEHLLDEFLALSEMPSLSLDLSFEKLLQSMPADSD-- 1784
MAKRPCP +V+ LL FL L++ PSLS+DLS E LL+S P DSD
Sbjct: 11 MAKRPCPFTAATASTAVAMNNHQVDGLLQTFLDLADSPSLSIDLSLEHLLESSPCDSDQS 70
Query: 1783 -LIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCS 1607
LIDRALK+GS+LL+A SSRKR+S HNSL W LPPDLTIKVFSMLDTQSLCYA+ATCS
Sbjct: 71 VLIDRALKLGSILLEAGNRSSRKRSSKHNSLTWVLPPDLTIKVFSMLDTQSLCYAAATCS 130
Query: 1606 FFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATT-PGSCLP 1430
F KCA DPLCYAN+DLTT+VPKVNNAVV+TMIQRAGK+L+SLKLG+VPG T+ PGSC
Sbjct: 131 MFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKSLQSLKLGIVPGPTSSPGSCET 190
Query: 1429 LTCTIRSAIGESNFSWNDKRSRQGRDSSVLILTRCCLSPLSGDGGAPGALLRKLHLYNIE 1250
L +IR+++ SN SWNDKR+RQG++SS ILTR CL L+GD GA G LL++LHLYNIE
Sbjct: 191 LVYSIRNSVDVSNISWNDKRTRQGKESS--ILTRSCLYSLTGDSGAAGTLLKRLHLYNIE 248
Query: 1249 RMDNASLGGALSACPSLLDLEIVGLHVELRQTLMSVSANCHFIERLFFESSKTGRDDSLK 1070
RMDN SL GALSACPSLLDLEIVGLHVELRQTL+SVS NC IERLFFESSKTGRD+SLK
Sbjct: 249 RMDNTSLYGALSACPSLLDLEIVGLHVELRQTLVSVSMNCPLIERLFFESSKTGRDESLK 308
Query: 1069 TQTCSELVNNCPHLTSLSLRGFKLHDCKVRTLVKGFRKLKYVDFSTSYSITXXXXXXXXX 890
+ TC +LV NCP+LTSL+LRGFKLHDCKVR LVKGFRKLKYVDFSTSYSIT
Sbjct: 309 SPTCVDLVTNCPNLTSLALRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGHFLRNLGG 368
Query: 889 XXXXXXLEVLILRDCMHLKEMEVSRLLTAILAGDFKLLMHLDISNREGLASEADWYHRCY 710
+L E+EV+RLLTA+L GDFK L HLD+SNREGLASE+DWYHRCY
Sbjct: 369 SSGG------------NLLEVEVARLLTAVLTGDFKSLRHLDVSNREGLASESDWYHRCY 416
Query: 709 NSSIMPIKQVLEARPDMRLVAEYPPEGSYIET---FDTDMNSDISLPSQFSSHTXXXXXX 539
+ +P+KQVLEARPDM L+A++PP+GS+I+ D+++NS++SLPSQ SSHT
Sbjct: 417 SLRTIPVKQVLEARPDMCLLADFPPDGSFIDVEQMIDSELNSEVSLPSQLSSHTSDSSLF 476
Query: 538 XXXXXXXXXXXXXSGNEDAQDA--VIYVESSDEIDF 437
SGNE+++D+ ++Y ESSDE+DF
Sbjct: 477 MSTSESSYNSDQSSGNEESRDSAYIVYEESSDEVDF 512
>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
Length = 603
Score = 616 bits (1588), Expect = e-174
Identities = 344/549 (62%), Positives = 391/549 (71%), Gaps = 53/549 (9%)
Frame = -2
Query: 1930 MAKRPCPLQN------------PR----GEVEHLLDEFLALSEMPSLSLDLSFEKLLQSM 1799
MAKRPC N PR ++E LL+ FL LS+ SL LSFEKLL S
Sbjct: 10 MAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSSGPSLHLSFEKLLDSR 69
Query: 1798 PADSD---LIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLC 1628
DSD LIDRAL++GS LL+A K S+RKRAS HNSL W LPPDLTIKVFSMLDTQSLC
Sbjct: 70 ACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLC 129
Query: 1627 YASATCSFFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGAT- 1451
Y +ATCS F KCA DPLCYAN+DLTT+VPKVNNAVV+TMIQRAGK L+SL+LG+VPG T
Sbjct: 130 YTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTL 189
Query: 1450 TPGSCLPLTCTIRSAIGESNFSWNDKRSRQGRDSSVLILTRCCLSPLSGDGGAPGALLRK 1271
+PGS PL TIR+++ + FSWNDKRSRQG++SS IL+R CL+ LSGD GA GALL++
Sbjct: 190 SPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESS--ILSRSCLTALSGDSGAAGALLKR 247
Query: 1270 LHLYNIERMDNASLGGALSACPSLLDLEIVGLHVELRQTLMSVSANCHFIERLFFESSKT 1091
LHLYNIERMDN +L ALSACPSLLDLEIVGLHVELRQTLMSVS NCH IERLFFESSKT
Sbjct: 248 LHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKT 307
Query: 1090 GRDDSLKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRTLVK------------------- 968
GRDDSLK+ TC +LVNNCPHLTSL+LRGFKLHD KVR LVK
Sbjct: 308 GRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKVVVHNFLIGRIVGLRHRGE 367
Query: 967 ----------GFRKLKYVDFSTSYSITXXXXXXXXXXXXXXXLEVLILRDCMHLKEMEVS 818
GF KLKYVDFSTSYSIT LEVL+LRDCMHLKE+EV+
Sbjct: 368 FLIVSALVCMGFHKLKYVDFSTSYSITGTFLRNLGSSTGGNLLEVLLLRDCMHLKEVEVA 427
Query: 817 RLLTAILAGDFKLLMHLDISNREGLASEADWYHRCYNSSIMPIKQVLEARPDMRLVAEYP 638
+ L+AI+AGDF+LL LDISNREGLASE DWY+RCYNSS++PIKQV E RPD+ L+AE+P
Sbjct: 428 KFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICLLAEFP 487
Query: 637 PEGSY--IETFDTDMNSDISLPSQFSSHTXXXXXXXXXXXXXXXXXXXSGNEDAQDA--V 470
EGS IE +NSD SL SQ SSH+ SGNED ++ V
Sbjct: 488 SEGSIIEIEQMIDILNSDASLSSQLSSHSSDSSVSMSSSESSYNSDQGSGNEDGRETGYV 547
Query: 469 IYVESSDEI 443
IY ESSDEI
Sbjct: 548 IYEESSDEI 556
>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
Length = 486
Score = 561 bits (1446), Expect = e-157
Identities = 316/525 (60%), Positives = 364/525 (69%), Gaps = 24/525 (4%)
Frame = -2
Query: 1930 MAKRPCPLQN------------PR----GEVEHLLDEFLALSEMPSLSLDLSFEKLLQSM 1799
MAKRPC N PR ++E LL+ FL LS+ SL LSFEKLL S
Sbjct: 10 MAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSSGPSLHLSFEKLLDSR 69
Query: 1798 PADSD---LIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLC 1628
DSD LIDRAL++GS LL+A K S+RKRAS HNSL W LPPDLTIKVFSMLDTQSLC
Sbjct: 70 ACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLC 129
Query: 1627 YASATCSFFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGAT- 1451
Y +ATCS F KCA DPLCYAN+DLTT+VPKVNNAVV+TMIQRAGK L+SL+LG+VPG T
Sbjct: 130 YTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTL 189
Query: 1450 TPGSCLPLTCTIRSAIGESNFSWNDKRSRQGRDSSVLILTRCCLSPLSGDGGAPGALLRK 1271
+PGS PL TIR+++ + FSWNDKRSRQG++SS IL+R CL+ LSGD GA GALL++
Sbjct: 190 SPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESS--ILSRSCLTALSGDSGAAGALLKR 247
Query: 1270 LHLYNIERMDNASLGGALSACPSLLDLEIVGLHVELRQTLMSVSANCHFIERLFFESSKT 1091
LHLYNIERMDN +L ALSACPSLLDLEIVGLHVELRQTLMSVS NCH IERLFFESSKT
Sbjct: 248 LHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKT 307
Query: 1090 GRDDSLKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRTLVKGFRKLKYVDFSTSYSITXX 911
GRDDSLK+ TC +LVNNCPHLTSL+LRGFKLHD KVR LVK
Sbjct: 308 GRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVK------------------- 348
Query: 910 XXXXXXXXXXXXXLEVLILRDCMHLKEMEVSRLLTAILAGDFKLLMHLDISNREGLASEA 731
+EV++ L+AI+AGDF+LL LDISNREGLASE
Sbjct: 349 ---------------------------VEVAKFLSAIIAGDFRLLRLLDISNREGLASEG 381
Query: 730 DWYHRCYNSSIMPIKQVLEARPDMRLVAEYPPEGSY--IETFDTDMNSDISLPSQFSSHT 557
DWY+RCYNSS++PIKQV E RPD+ L+AE+P EGS IE +NSD SL SQ SSH+
Sbjct: 382 DWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHS 441
Query: 556 XXXXXXXXXXXXXXXXXXXSGNEDAQDA--VIYVESSDEIDFPAL 428
SGNED ++ VIY ESSDE+D A+
Sbjct: 442 SDSSVSMSSSESSYNSDQGSGNEDGRETGYVIYEESSDEVDILAV 486