BLASTX nr result

ID: Glycyrrhiza23_contig00003779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003779
         (1787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590425.1| DEAD-box ATP-dependent RNA helicase [Medicag...   729   0.0  
gb|AFK42096.1| unknown [Medicago truncatula]                          729   0.0  
ref|XP_003554752.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   723   0.0  
ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   723   0.0  
ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   655   0.0  

>ref|XP_003590425.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355479473|gb|AES60676.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 491

 Score =  729 bits (1883), Expect = 0.0
 Identities = 374/481 (77%), Positives = 418/481 (86%), Gaps = 4/481 (0%)
 Frame = +3

Query: 42   PPLANRSWADEAEEETDAPSSSGT-ETLSLSVDGLTIDENXXXXXXXXXXXXXSNIQAVT 218
            PP   +SWAD+A+EET+  S+S   ET SL+V+ LTIDE              SNI AVT
Sbjct: 10   PPPTTKSWADQADEETNQTSTSAADETSSLNVNELTIDEENKSLSKSLDDPDDSNITAVT 69

Query: 219  SGDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNG 398
            +GDTPYTSA  FE+LSLS  LLKG+YVEMKF+KPSKIQA SLPMILNPPHRDLIAQAHNG
Sbjct: 70   AGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNG 129

Query: 399  SGKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDS 578
            SGKTTCF LGMLSRVDP+++APQALCICPTRELA+QNIEVLRKMGKYTGISSECA+P D 
Sbjct: 130  SGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGISSECAVPMDR 189

Query: 579  RDGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSL 758
            RD   + KRAPI AQVVIGTPGT++  + +KKLGVT+LKILVFDEADQMLAEDGF++DSL
Sbjct: 190  RDSIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSL 249

Query: 759  KIMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTV-KNDHNKLFVKKEELSLDAVKQYKVR 935
            +I+  I+K NS+CQVLLFSATFN+TVKNF +R V K +HN+LFVKKEELSLDAVKQYKV 
Sbjct: 250  RIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVL 309

Query: 936  CPDELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEE 1115
             PDEL KI+VIK+YIFELGENVGQTIIFVRTRNSAKMLHKALVD GYEVTSIQGAL+H +
Sbjct: 310  VPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVD 369

Query: 1116 RDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYT--RELEPDYEVY 1289
            RDKIVKEF+DGLTQVLISTDVLARGFDQQQVNLVINYDLPLKY+AEYT   E EPDYEVY
Sbjct: 370  RDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVY 429

Query: 1290 LHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGL 1469
            LHRVGRAGRFGRKGAVFNLIC ERDEK +SKIE HFGT++ EV+++SVEDYK ALK AGL
Sbjct: 430  LHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDYKVALKEAGL 489

Query: 1470 L 1472
            L
Sbjct: 490  L 490


>gb|AFK42096.1| unknown [Medicago truncatula]
          Length = 491

 Score =  729 bits (1881), Expect = 0.0
 Identities = 374/481 (77%), Positives = 418/481 (86%), Gaps = 4/481 (0%)
 Frame = +3

Query: 42   PPLANRSWADEAEEETDAPSSSGT-ETLSLSVDGLTIDENXXXXXXXXXXXXXSNIQAVT 218
            PP   +SWAD+A+EET+  S+S   ET SL+V+ LTIDE              SNI AVT
Sbjct: 10   PPPTTKSWADQADEETNQTSTSAADETSSLNVNELTIDEENKSLSKSLDDPDDSNITAVT 69

Query: 219  SGDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNG 398
            +GDTPYTSA  FE+LSLS  LLKG+YVEMKF+KPSKIQA SLPMILNPPHRDLIAQAHNG
Sbjct: 70   AGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNG 129

Query: 399  SGKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDS 578
            SGKTTCF LGMLSRVDP+++APQALCICPTRELA+QNIEVLRKMGKYTGISSECA+P D 
Sbjct: 130  SGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGISSECAVPMDR 189

Query: 579  RDGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSL 758
            RD   + KRAPI AQVVIGTPGT++  + +KKLGVT+LKILVFDEADQMLAEDGF++DSL
Sbjct: 190  RDPIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSL 249

Query: 759  KIMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTV-KNDHNKLFVKKEELSLDAVKQYKVR 935
            +I+  I+K NS+CQVLLFSATFN+TVKNF +R V K +HN+LFVKKEELSLDAVKQYKV 
Sbjct: 250  RIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVL 309

Query: 936  CPDELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEE 1115
             PDEL KI+VIK+YIFELGENVGQTIIFVRTRNSAKMLHKALVD GYEVTSIQGAL+H +
Sbjct: 310  VPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVD 369

Query: 1116 RDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYT--RELEPDYEVY 1289
            RDKIVKEF+DGLTQVLISTDVLARGFDQQQVNLVINYDLPLKY+AEYT   E EPDYEVY
Sbjct: 370  RDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVY 429

Query: 1290 LHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGL 1469
            LHRVGRAGRFGRKGAVFNLIC ERDEK +SKIE HFGT++ EV+++SVEDYK ALK AGL
Sbjct: 430  LHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDYKVALKEAGL 489

Query: 1470 L 1472
            L
Sbjct: 490  L 490


>ref|XP_003554752.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Glycine max]
          Length = 495

 Score =  723 bits (1867), Expect = 0.0
 Identities = 364/477 (76%), Positives = 418/477 (87%)
 Frame = +3

Query: 42   PPLANRSWADEAEEETDAPSSSGTETLSLSVDGLTIDENXXXXXXXXXXXXXSNIQAVTS 221
            P    +SWADEA+EET+  S++ +E+ S++++ LTID+              SNIQAVTS
Sbjct: 23   PAPVTKSWADEADEETNNTSTAESESSSINLEALTIDDKENNSSKFLDDPDDSNIQAVTS 82

Query: 222  GDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNGS 401
            GDTPYTSAARFEDLSLS  LLKG+YVEMKF+KPSKIQAISLPMIL+PPHRDLIAQAHNGS
Sbjct: 83   GDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPHRDLIAQAHNGS 142

Query: 402  GKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDSR 581
            GKTTCFVLGMLSRVDP V+APQALC+CPTRELA+QN+EVLR+MGKYTGI+SEC +  D R
Sbjct: 143  GKTTCFVLGMLSRVDPKVQAPQALCVCPTRELAIQNVEVLRRMGKYTGIASECLVRLD-R 201

Query: 582  DGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSLK 761
            D   ++KRAPI AQVVIGTPGTI+K++ FKKLG +RLKILVFDEADQMLA++GF++DSLK
Sbjct: 202  DAVHVSKRAPIMAQVVIGTPGTIKKFISFKKLGTSRLKILVFDEADQMLAQEGFRDDSLK 261

Query: 762  IMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTVKNDHNKLFVKKEELSLDAVKQYKVRCP 941
            IM  I+K N  CQVLLFSATFNDTVKNF+SRTVK DHNKLFVKKEELSLDAVKQYKV CP
Sbjct: 262  IMKDIEKDNKKCQVLLFSATFNDTVKNFISRTVKMDHNKLFVKKEELSLDAVKQYKVYCP 321

Query: 942  DELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEERD 1121
            DEL+KI+VIKDYIFE+GENVGQTIIF+ TR+SA++LH+ALV+ GYEVTSIQG+L +EERD
Sbjct: 322  DELAKIDVIKDYIFEIGENVGQTIIFMATRDSARLLHQALVNLGYEVTSIQGSLSNEERD 381

Query: 1122 KIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRELEPDYEVYLHRV 1301
            K+VKEF+DGLTQVLISTD+LARGFDQQQVNLVINY+LP K+S       EPDYEVYLHRV
Sbjct: 382  KVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYNLPNKHSLRD----EPDYEVYLHRV 437

Query: 1302 GRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGLL 1472
            GRAGRFGRKGAVFNLICDE DE+LMSKIENHFGT +TEVR +SVE+YK ALK AGLL
Sbjct: 438  GRAGRFGRKGAVFNLICDENDERLMSKIENHFGTCVTEVRAQSVEEYKAALKEAGLL 494


>ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Glycine max]
          Length = 488

 Score =  723 bits (1867), Expect = 0.0
 Identities = 368/478 (76%), Positives = 419/478 (87%), Gaps = 1/478 (0%)
 Frame = +3

Query: 42   PPL-ANRSWADEAEEETDAPSSSGTETLSLSVDGLTIDENXXXXXXXXXXXXXSNIQAVT 218
            PP+ A +SWADEA+EET+A S++  ET S++++ LTID+              SNIQAVT
Sbjct: 16   PPVPATKSWADEADEETNA-STAEAETSSVNLEALTIDDKEKNSSKLLDDPDDSNIQAVT 74

Query: 219  SGDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNG 398
            SGDTPYTSAARFEDLSLS  LLKG+YVEMKF+KPSKIQAISLPMIL+PP+RDLIAQAHNG
Sbjct: 75   SGDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPNRDLIAQAHNG 134

Query: 399  SGKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDS 578
            SGKTTCFVLGMLSRVDP V+APQALCICPTRELA+QNIEVLR+MGKYTGI+SEC +P D 
Sbjct: 135  SGKTTCFVLGMLSRVDPKVQAPQALCICPTRELAIQNIEVLRRMGKYTGIASECLVPLD- 193

Query: 579  RDGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSL 758
            RD   ++KRAPI AQVVIGTPGT++K++ FKKLG TRL+ILVFDEADQMLAEDGF++DSL
Sbjct: 194  RDAVHVSKRAPIMAQVVIGTPGTVKKFISFKKLGTTRLRILVFDEADQMLAEDGFRDDSL 253

Query: 759  KIMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTVKNDHNKLFVKKEELSLDAVKQYKVRC 938
            +IM  I+K NS CQVLLFSATFNDTVKNFVSRTV+ DHNKLFVKKEELSLDAVKQYKV C
Sbjct: 254  RIMKDIEKENSKCQVLLFSATFNDTVKNFVSRTVRMDHNKLFVKKEELSLDAVKQYKVYC 313

Query: 939  PDELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEER 1118
            PDEL+KI+V+KDYIFE+GENVGQTIIFVR++ +A++ H+ALV  GYEVTSIQG+L +EER
Sbjct: 314  PDELAKIDVVKDYIFEIGENVGQTIIFVRSKITARLTHEALVKLGYEVTSIQGSLSNEER 373

Query: 1119 DKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRELEPDYEVYLHR 1298
            DK+VKEF+DGLTQVLISTD+LARGFDQQQVNLVINYDLP KY        EPDYEVYLHR
Sbjct: 374  DKVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYDLPKKYGVRD----EPDYEVYLHR 429

Query: 1299 VGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGLL 1472
            VGRAGRFGRKGAVFNLIC E DE+LMSKIENHFGT +TEVR +SVE+YK ALK AGLL
Sbjct: 430  VGRAGRFGRKGAVFNLICGELDERLMSKIENHFGTRVTEVRAQSVEEYKAALKEAGLL 487


>ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Vitis
            vinifera] gi|297740016|emb|CBI30198.3| unnamed protein
            product [Vitis vinifera]
          Length = 473

 Score =  655 bits (1689), Expect = 0.0
 Identities = 331/476 (69%), Positives = 395/476 (82%), Gaps = 1/476 (0%)
 Frame = +3

Query: 45   PLANRSWADEAEEETDAPSSSGTETLSLSVDGLTIDENXXXXXXXXXXXXXSNIQAVTSG 224
            P   + W D    E D PSSS T  + L V+ LTI +              S+IQAVTSG
Sbjct: 6    PKPKQLWGDV---EDDPPSSSSTPAVDLPVESLTIHDEAKEAESLDEPKD-SSIQAVTSG 61

Query: 225  DTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNGSG 404
            DTPYTSA+ FEDL+LS  LL+GIY EMKF++PSKIQAISLPMIL PP+++LIAQAHNGSG
Sbjct: 62   DTPYTSASTFEDLNLSPELLRGIYSEMKFERPSKIQAISLPMILTPPYKNLIAQAHNGSG 121

Query: 405  KTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDSRD 584
            KTTCFVLGMLSRVDP ++ PQALCICPTRELA+QN+EVLRKMGK+TGI SECAIP DS +
Sbjct: 122  KTTCFVLGMLSRVDPKLQVPQALCICPTRELAIQNLEVLRKMGKHTGIESECAIPMDSAN 181

Query: 585  GTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSLKI 764
             T+I++R P+ AQVVIGTPGT++KWM  +KLG++ +KILVFDEAD MLAEDGFK+DSL+I
Sbjct: 182  YTSISQRPPVKAQVVIGTPGTVKKWMSHRKLGISNMKILVFDEADHMLAEDGFKDDSLRI 241

Query: 765  MNAIKKSNSNCQVLLFSATFNDTVKNFVSRTVKNDHNKLFVKKEELSLDAVKQYKVRCPD 944
            M AI+KS + CQVLLFSATFNDTVKNFV+R VK D+N++FVKKEELSL +VKQYKV+CPD
Sbjct: 242  MKAIEKSGAQCQVLLFSATFNDTVKNFVTRIVK-DYNQMFVKKEELSLQSVKQYKVKCPD 300

Query: 945  ELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEERDK 1124
            ELSKI VIKD IFE+G+ +GQTIIFVRT+NSA MLHKALVDFGYEVT+IQGAL  E+RDK
Sbjct: 301  ELSKILVIKDKIFEIGQKLGQTIIFVRTKNSAGMLHKALVDFGYEVTTIQGALRQEDRDK 360

Query: 1125 IVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRELEPDYEVYLHRVG 1304
            I+KEF+DGLTQVLISTD+LARGFDQ +VNLV+NYDLPLKY      + EPDYEVYLHR+G
Sbjct: 361  IIKEFKDGLTQVLISTDLLARGFDQSRVNLVVNYDLPLKYGT----QAEPDYEVYLHRIG 416

Query: 1305 RAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVRE-KSVEDYKGALKAAGL 1469
            RAGRFGRKGAVFNL+C ++D  L+SKIENHFG  + E+   ++ +D++ A+K AGL
Sbjct: 417  RAGRFGRKGAVFNLLCSDKDNILISKIENHFGVQIAEIPSWQNDDDFEAAMKDAGL 472


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