BLASTX nr result

ID: Glycyrrhiza23_contig00003677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003677
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chlorop...   407   e-111
gb|ACU24072.1| unknown [Glycine max]                                  405   e-110
ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chlorop...   399   e-109
gb|AFK41179.1| unknown [Lotus japonicus]                              378   e-102
gb|AFK47775.1| unknown [Lotus japonicus]                              376   e-102

>ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine max]
          Length = 267

 Score =  407 bits (1046), Expect = e-111
 Identities = 202/243 (83%), Positives = 224/243 (92%)
 Frame = +1

Query: 274  QFRPFTPQSSPSLFPLGNRHGSSVVSVRATAAGAVLVEKSEAEKVNRLKTTYSEKIIPLL 453
            QFR F   SS SLFP GNRHG++VVSV+A+A+G VLVEKSEAEK NRLKT Y+EKIIPLL
Sbjct: 18   QFRAFQFSSS-SLFPHGNRHGNAVVSVKASASGVVLVEKSEAEKANRLKTAYTEKIIPLL 76

Query: 454  MEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLAKITGQRPVKTRARASIAT 633
            MEEFSYTN HQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLA ITGQRP+KTRARAS+AT
Sbjct: 77   MEEFSYTNKHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLAT 136

Query: 634  FKIREGQPLGIAVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQS 813
            FKIREGQPLGIAVTLRGNMMYSFLDRV+NLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ 
Sbjct: 137  FKIREGQPLGIAVTLRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQG 196

Query: 814  VFPEVRSEILGKARGMDVCITTTAKTDKEALRLLALMGMPFREGGEPASTIPKKRMKSHH 993
            VFPE+R++++GK RGMD+CI TTA TD+EA +LLALMGMPFREG  PA+TI KK++KSHH
Sbjct: 197  VFPEIRADVVGKPRGMDICIVTTANTDQEAQKLLALMGMPFREGSGPATTIRKKKLKSHH 256

Query: 994  FEA 1002
            F+A
Sbjct: 257  FDA 259


>gb|ACU24072.1| unknown [Glycine max]
          Length = 267

 Score =  405 bits (1040), Expect = e-110
 Identities = 201/243 (82%), Positives = 223/243 (91%)
 Frame = +1

Query: 274  QFRPFTPQSSPSLFPLGNRHGSSVVSVRATAAGAVLVEKSEAEKVNRLKTTYSEKIIPLL 453
            QFR F   SS SLFP GNRHG++VVSV+A+A+G VLVEKSEAEK NRLKT Y+EKIIPLL
Sbjct: 18   QFRAFQFSSS-SLFPHGNRHGNAVVSVKASASGVVLVEKSEAEKANRLKTAYTEKIIPLL 76

Query: 454  MEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLAKITGQRPVKTRARASIAT 633
            MEEFSYTN HQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLA ITGQRP+KTRARAS+AT
Sbjct: 77   MEEFSYTNKHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLAT 136

Query: 634  FKIREGQPLGIAVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQS 813
             KIREGQPLGIAVTLRGNMMYSFLDRV+NLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ 
Sbjct: 137  LKIREGQPLGIAVTLRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQG 196

Query: 814  VFPEVRSEILGKARGMDVCITTTAKTDKEALRLLALMGMPFREGGEPASTIPKKRMKSHH 993
            VFPE+R++++GK RGMD+CI TTA TD+EA +LLALMGMPFREG  PA+TI KK++KSHH
Sbjct: 197  VFPEIRADVVGKPRGMDICIVTTANTDQEAQKLLALMGMPFREGSGPATTIRKKKLKSHH 256

Query: 994  FEA 1002
            F+A
Sbjct: 257  FDA 259


>ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine max]
          Length = 267

 Score =  399 bits (1026), Expect = e-109
 Identities = 198/243 (81%), Positives = 222/243 (91%)
 Frame = +1

Query: 274  QFRPFTPQSSPSLFPLGNRHGSSVVSVRATAAGAVLVEKSEAEKVNRLKTTYSEKIIPLL 453
            QFR F   SS  LFP  N+HG+++VSV+A+ +G VLVEKSEAEK NRLKT Y+EKIIPLL
Sbjct: 18   QFRAFQFSSS-LLFPHSNKHGNALVSVKASVSGVVLVEKSEAEKANRLKTAYTEKIIPLL 76

Query: 454  MEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLAKITGQRPVKTRARASIAT 633
            MEEFSYTN HQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLA ITGQRP+KTRARAS+AT
Sbjct: 77   MEEFSYTNKHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLAT 136

Query: 634  FKIREGQPLGIAVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQS 813
            FKIREGQPLGI+VTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ 
Sbjct: 137  FKIREGQPLGISVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQG 196

Query: 814  VFPEVRSEILGKARGMDVCITTTAKTDKEALRLLALMGMPFREGGEPASTIPKKRMKSHH 993
            VFPE+R++++GK RGMD+CI TTAKTD+EA +LLALMGMPFREG  PA+TI KK++KSHH
Sbjct: 197  VFPEIRADVVGKPRGMDICIATTAKTDQEAHKLLALMGMPFREGSGPATTIRKKKLKSHH 256

Query: 994  FEA 1002
            F+A
Sbjct: 257  FDA 259


>gb|AFK41179.1| unknown [Lotus japonicus]
          Length = 267

 Score =  378 bits (971), Expect = e-102
 Identities = 189/243 (77%), Positives = 216/243 (88%), Gaps = 1/243 (0%)
 Frame = +1

Query: 274 QFRPFTPQSSPSLFPLGNRHGSSVVSVRATAAGAVLVEKSEAEKVNRLKTTYSEKIIPLL 453
           QFRP  PQ SP     G RHG++VVSV+ATAAGAVLVEKSEAE V RLK TY+EK+IP L
Sbjct: 20  QFRPSPPQFSPH----GIRHGNAVVSVKATAAGAVLVEKSEAETVFRLKRTYTEKVIPKL 75

Query: 454 MEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLAKITGQRPVKTRARASIAT 633
           +EEFSYTNIHQVPK++KIVVNCGIG+AAQNAKGLDAA++DLA ITGQRPVKTRAR S+AT
Sbjct: 76  VEEFSYTNIHQVPKVKKIVVNCGIGEAAQNAKGLDAAVNDLALITGQRPVKTRARTSVAT 135

Query: 634 FKIREGQPLGIAVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQS 813
           FKIREGQPLGIAVTLRG +MYSFLDR+VNLG PRTRDFQGVN +SFDGHGNF+IGIKDQ 
Sbjct: 136 FKIREGQPLGIAVTLRGKVMYSFLDRLVNLGFPRTRDFQGVNTSSFDGHGNFNIGIKDQG 195

Query: 814 VFPEVRSEILGKARGMDVCITTTAKTDKEALRLLALMGMPFRE-GGEPASTIPKKRMKSH 990
           VFPE+R +++GK RGMDVCI TTA+TDKEA RLLAL+GMPFRE GG  A+ +PKK++KSH
Sbjct: 196 VFPEIRFDVVGKPRGMDVCIETTAETDKEAQRLLALLGMPFREGGGSSATALPKKKLKSH 255

Query: 991 HFE 999
           HF+
Sbjct: 256 HFD 258


>gb|AFK47775.1| unknown [Lotus japonicus]
          Length = 267

 Score =  376 bits (966), Expect = e-102
 Identities = 188/243 (77%), Positives = 215/243 (88%), Gaps = 1/243 (0%)
 Frame = +1

Query: 274 QFRPFTPQSSPSLFPLGNRHGSSVVSVRATAAGAVLVEKSEAEKVNRLKTTYSEKIIPLL 453
           QFRP  PQ SP     G RHG +VVSV+ATAAGAVLVEKSEAE V RLK TY+EK+IP L
Sbjct: 20  QFRPSPPQFSPH----GIRHGDAVVSVKATAAGAVLVEKSEAETVFRLKRTYTEKVIPKL 75

Query: 454 MEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLAKITGQRPVKTRARASIAT 633
           +EEFSYTNIHQVPK+++IVVNCGIG+AAQNAKGLDAA++DLA ITGQRPVKTRAR S+AT
Sbjct: 76  VEEFSYTNIHQVPKVKEIVVNCGIGEAAQNAKGLDAAVNDLALITGQRPVKTRARTSVAT 135

Query: 634 FKIREGQPLGIAVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQS 813
           FKIREGQPLGIAVTLRG +MYSFLDR+VNLG PRTRDFQGVN +SFDGHGNF+IGIKDQ 
Sbjct: 136 FKIREGQPLGIAVTLRGKVMYSFLDRLVNLGFPRTRDFQGVNTSSFDGHGNFNIGIKDQG 195

Query: 814 VFPEVRSEILGKARGMDVCITTTAKTDKEALRLLALMGMPFRE-GGEPASTIPKKRMKSH 990
           VFPE+R +++GK RGMDVCI TTA+TDKEA RLLAL+GMPFRE GG  A+ +PKK++KSH
Sbjct: 196 VFPEIRFDVVGKPRGMDVCIETTAETDKEAQRLLALLGMPFREGGGSSATALPKKKLKSH 255

Query: 991 HFE 999
           HF+
Sbjct: 256 HFD 258


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