BLASTX nr result
ID: Glycyrrhiza23_contig00003671
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00003671 (982 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539020.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik... 234 2e-59 ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago tr... 231 2e-58 ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik... 230 3e-58 ref|XP_002313800.1| chromatin remodeling complex subunit [Populu... 187 4e-45 ref|XP_002509474.1| Transcription regulatory protein SWI3, putat... 185 1e-44 >ref|XP_003539020.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Glycine max] Length = 1018 Score = 234 bits (598), Expect = 2e-59 Identities = 122/158 (77%), Positives = 133/158 (84%) Frame = +3 Query: 3 VSTXXXXXXXXXXXXNEEEDQIRQLTSSLIEKQLHKLETKLAFFNDMENVVMRVREHLER 182 VST N+EEDQIRQLTS LIEKQLHKLETKLAFFND+ENVVMR REH+ER Sbjct: 862 VSTLAAAAAKAKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVER 921 Query: 183 SRHKLYHERAMIIASRLGLPASSSRGVPPSVPTNRIPMNFANSLPRPQIIMNPQRPLISR 362 SRHKLYHERA+IIASRLG+P SSSRGVPPS+ TNRIP N ANSLPRPQ++MNP RPLISR Sbjct: 922 SRHKLYHERALIIASRLGIPPSSSRGVPPSITTNRIPTNIANSLPRPQMMMNPPRPLISR 981 Query: 363 PVMSTVATTLPNQLTSATAAGNSVQPSSQEKLSSVGTK 476 P TVATTL N L S+TAAGNSV+PS+QEKLSSVGTK Sbjct: 982 PA-GTVATTLQNPLVSSTAAGNSVRPSNQEKLSSVGTK 1018 >ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago truncatula] gi|355507940|gb|AES89082.1| SWI/SNF complex subunit SMARCC1 [Medicago truncatula] Length = 1041 Score = 231 bits (590), Expect = 2e-58 Identities = 122/158 (77%), Positives = 135/158 (85%) Frame = +3 Query: 3 VSTXXXXXXXXXXXXNEEEDQIRQLTSSLIEKQLHKLETKLAFFNDMENVVMRVREHLER 182 VST N+EEDQIR+LTS+LIEKQLHKLETKLAFFNDME++VMRV+E L+R Sbjct: 885 VSTLAAAAVKAKVLANQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDR 944 Query: 183 SRHKLYHERAMIIASRLGLPASSSRGVPPSVPTNRIPMNFANSLPRPQIIMNPQRPLISR 362 SRHKLYHERAMII+SRLG+PASSSRGVPPS+PTNRIPMNFANSL RPQ MNPQ PLISR Sbjct: 945 SRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISR 1004 Query: 363 PVMSTVATTLPNQLTSATAAGNSVQPSSQEKLSSVGTK 476 P ST ATTLPN L SATAAG+SV+PSSQE LSSVGT+ Sbjct: 1005 P-GSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1041 >ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Glycine max] Length = 1016 Score = 230 bits (587), Expect = 3e-58 Identities = 121/158 (76%), Positives = 133/158 (84%) Frame = +3 Query: 3 VSTXXXXXXXXXXXXNEEEDQIRQLTSSLIEKQLHKLETKLAFFNDMENVVMRVREHLER 182 VST N+EEDQIRQLTS LIEKQLHKLETKLAFFND+ENVVMR REH+ER Sbjct: 861 VSTLAAAAVKAKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVER 920 Query: 183 SRHKLYHERAMIIASRLGLPASSSRGVPPSVPTNRIPMNFANSLPRPQIIMNPQRPLISR 362 SRHKLYHERA+IIASRLG+P SSSRGVPPS+PTNRIP N ANSLPRPQ++MNP RPLISR Sbjct: 921 SRHKLYHERALIIASRLGIPPSSSRGVPPSIPTNRIPTNIANSLPRPQMMMNPPRPLISR 980 Query: 363 PVMSTVATTLPNQLTSATAAGNSVQPSSQEKLSSVGTK 476 P TVA T+ N LT +TAAGNSV+PS+QEKLSSVGTK Sbjct: 981 PA-GTVA-TIQNPLTPSTAAGNSVRPSNQEKLSSVGTK 1016 >ref|XP_002313800.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222850208|gb|EEE87755.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1010 Score = 187 bits (474), Expect = 4e-45 Identities = 98/143 (68%), Positives = 115/143 (80%) Frame = +3 Query: 48 NEEEDQIRQLTSSLIEKQLHKLETKLAFFNDMENVVMRVREHLERSRHKLYHERAMIIAS 227 N+EEDQIRQL +SLIEKQLHKLE KLAFFN+M++V+MRVRE L+RSR +LY ERA IIAS Sbjct: 870 NQEEDQIRQLAASLIEKQLHKLEMKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIAS 929 Query: 228 RLGLPASSSRGVPPSVPTNRIPMNFANSLPRPQIIMNPQRPLISRPVMSTVATTLPNQLT 407 RLGLP SSR VPPS+P NRI MNFAN+ PRP + M QRP ISRP M +A T ++ Sbjct: 930 RLGLP-PSSRAVPPSLPANRIAMNFANAFPRPPMSMTAQRPPISRP-MGALAPTPDTLVS 987 Query: 408 SATAAGNSVQPSSQEKLSSVGTK 476 + T AGNS++PS QEKLSSVGTK Sbjct: 988 TTTTAGNSIRPSGQEKLSSVGTK 1010 >ref|XP_002509474.1| Transcription regulatory protein SWI3, putative [Ricinus communis] gi|223549373|gb|EEF50861.1| Transcription regulatory protein SWI3, putative [Ricinus communis] Length = 983 Score = 185 bits (470), Expect = 1e-44 Identities = 93/143 (65%), Positives = 118/143 (82%) Frame = +3 Query: 48 NEEEDQIRQLTSSLIEKQLHKLETKLAFFNDMENVVMRVREHLERSRHKLYHERAMIIAS 227 N+EEDQIRQL +SLIEKQLHKLETKL+FFN+M++++MRVRE L++SR +LYHERA IIA+ Sbjct: 843 NQEEDQIRQLAASLIEKQLHKLETKLSFFNEMDHIIMRVREQLDKSRQRLYHERAQIIAT 902 Query: 228 RLGLPASSSRGVPPSVPTNRIPMNFANSLPRPQIIMNPQRPLISRPVMSTVATTLPNQLT 407 RLG+P SSSR +PP++PTNRI MN ANS+PRP + MN QRP ISRP M +A +P+ Sbjct: 903 RLGIPPSSSRAMPPTLPTNRIAMNIANSIPRPPVNMNSQRPPISRP-MGALA-PIPSNPF 960 Query: 408 SATAAGNSVQPSSQEKLSSVGTK 476 +T AGNS++PS Q+ LSSV TK Sbjct: 961 VSTTAGNSIRPSGQDNLSSVVTK 983