BLASTX nr result

ID: Glycyrrhiza23_contig00003610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003610
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47504.1| unknown [Medicago truncatula]                          112   3e-23
ref|XP_003611270.1| Pentatricopeptide repeat-containing protein ...   112   3e-23
ref|NP_001241921.1| uncharacterized protein LOC100795658 [Glycin...    99   4e-19
emb|CBI39461.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002269708.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17

>gb|AFK47504.1| unknown [Medicago truncatula]
          Length = 86

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/65 (87%), Positives = 61/65 (93%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLVEEKERVLEKYSYVFT--EEEPTK 174
           LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGL+EEKERV+EKYS++FT  EE PTK
Sbjct: 2   LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLIEEKERVMEKYSHLFTIKEERPTK 61

Query: 175 KRGRK 189
           K GRK
Sbjct: 62  KGGRK 66


>ref|XP_003611270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512605|gb|AES94228.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 301

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/65 (87%), Positives = 61/65 (93%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLVEEKERVLEKYSYVFT--EEEPTK 174
           LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGL+EEKERV+EKYS++FT  EE PTK
Sbjct: 190 LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLIEEKERVMEKYSHLFTIKEERPTK 249

Query: 175 KRGRK 189
           K GRK
Sbjct: 250 KGGRK 254


>ref|NP_001241921.1| uncharacterized protein LOC100795658 [Glycine max]
           gi|255637229|gb|ACU18945.1| unknown [Glycine max]
          Length = 300

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = +1

Query: 1   LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLVEEKERVLEKYSYVFTEEEPTKKR 180
           L+DLV+LFKGLEAFDRKPRDK IIQKVANAYE+LGLV+EK RVLEKY+++FTE  PTK+ 
Sbjct: 195 LQDLVKLFKGLEAFDRKPRDKSIIQKVANAYEVLGLVKEKVRVLEKYNHLFTETGPTKRH 254

Query: 181 GRKLCE 198
            R   E
Sbjct: 255 KRNSFE 260


>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/63 (68%), Positives = 54/63 (85%)
 Frame = +1

Query: 1   LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLVEEKERVLEKYSYVFTEEEPTKKR 180
           LE+LV+LFKGLEAFDRKP+DKL+++KVA+AYEMLGL+EEKER+ EKY Y+FTE    K +
Sbjct: 204 LENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKYDYLFTETVAGKPK 263

Query: 181 GRK 189
             K
Sbjct: 264 KSK 266


>ref|XP_002269708.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like isoform 2 [Vitis vinifera]
          Length = 252

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/63 (68%), Positives = 54/63 (85%)
 Frame = +1

Query: 1   LEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLVEEKERVLEKYSYVFTEEEPTKKR 180
           LE+LV+LFKGLEAFDRKP+DKL+++KVA+AYEMLGL+EEKER+ EKY Y+FTE    K +
Sbjct: 160 LENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKYDYLFTETVAGKPK 219

Query: 181 GRK 189
             K
Sbjct: 220 KSK 222


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