BLASTX nr result

ID: Glycyrrhiza23_contig00003606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003606
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531656.1| PREDICTED: cytochrome c oxidase assembly pro...   186   6e-45
ref|XP_003530128.1| PREDICTED: cytochrome c oxidase assembly pro...   186   6e-45
ref|XP_003626986.1| Cytochrome c oxidase assembly protein COX19 ...   181   3e-43
ref|XP_002299727.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35
ref|XP_002515994.1| Cytochrome c oxidase assembly protein COX19,...   149   8e-34

>ref|XP_003531656.1| PREDICTED: cytochrome c oxidase assembly protein COX19-like
           [Glycine max]
          Length = 101

 Score =  186 bits (473), Expect = 6e-45
 Identities = 86/101 (85%), Positives = 93/101 (92%)
 Frame = -3

Query: 543 MSAAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKKEYLNCLKTAANKSENCREFSKKY 364
           MSA GGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEK EYLNCLKTA ++SE CR FSKKY
Sbjct: 1   MSAVGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKIEYLNCLKTAGHQSEKCRLFSKKY 60

Query: 363 LQCRMEKNLMARQDLAELGFRESNAEPPGGKITERIDNRDQ 241
           LQCRMEKNLMA+QDL ELGF+ESN E PGGKIT+R+DN+DQ
Sbjct: 61  LQCRMEKNLMAKQDLGELGFKESNVETPGGKITDRVDNQDQ 101


>ref|XP_003530128.1| PREDICTED: cytochrome c oxidase assembly protein COX19-like
           [Glycine max]
          Length = 101

 Score =  186 bits (473), Expect = 6e-45
 Identities = 85/101 (84%), Positives = 94/101 (93%)
 Frame = -3

Query: 543 MSAAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKKEYLNCLKTAANKSENCREFSKKY 364
           MSAAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEK EYLNCLKTA ++SE CR+FSKKY
Sbjct: 1   MSAAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKIEYLNCLKTAGHQSEKCRQFSKKY 60

Query: 363 LQCRMEKNLMARQDLAELGFRESNAEPPGGKITERIDNRDQ 241
           LQCRMEKNLMA+QDL ELGF+ESN E PGG IT+R+DN++Q
Sbjct: 61  LQCRMEKNLMAKQDLGELGFKESNVETPGGNITDRVDNQEQ 101


>ref|XP_003626986.1| Cytochrome c oxidase assembly protein COX19 [Medicago truncatula]
           gi|217075640|gb|ACJ86180.1| unknown [Medicago
           truncatula] gi|355521008|gb|AET01462.1| Cytochrome c
           oxidase assembly protein COX19 [Medicago truncatula]
           gi|388511231|gb|AFK43677.1| unknown [Medicago
           truncatula]
          Length = 100

 Score =  181 bits (458), Expect = 3e-43
 Identities = 83/99 (83%), Positives = 92/99 (92%)
 Frame = -3

Query: 537 AAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKKEYLNCLKTAANKSENCREFSKKYLQ 358
           ++GGAFGGNRGLRPVPPEKG+FPLDHMHLCDL+KKEYLNCLKTA NKSE CR FSKKYLQ
Sbjct: 2   SSGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLDKKEYLNCLKTAGNKSEICRGFSKKYLQ 61

Query: 357 CRMEKNLMARQDLAELGFRESNAEPPGGKITERIDNRDQ 241
           CRMEKNLMA+QDLAELGF+ESNAE P GK TERI +++Q
Sbjct: 62  CRMEKNLMAKQDLAELGFKESNAESPAGKTTERIGDQEQ 100


>ref|XP_002299727.1| predicted protein [Populus trichocarpa] gi|222846985|gb|EEE84532.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  154 bits (390), Expect = 3e-35
 Identities = 72/97 (74%), Positives = 85/97 (87%), Gaps = 1/97 (1%)
 Frame = -3

Query: 537 AAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKKEYLNCLKTAANKSENCREFSKKYLQ 358
           +AGGAFGGNRGLRPVPPEKGIFPLDHMH CDLEKK+YLNCLK++ ++SE CR FSKKYL+
Sbjct: 2   SAGGAFGGNRGLRPVPPEKGIFPLDHMHECDLEKKDYLNCLKSSGHQSEKCRLFSKKYLE 61

Query: 357 CRMEKNLMARQDLAELGF-RESNAEPPGGKITERIDN 250
           CRMEKNLMA+QD++ELGF + S  + PG K  ERI+N
Sbjct: 62  CRMEKNLMAKQDMSELGFGKVSEIDAPGEKPNERINN 98


>ref|XP_002515994.1| Cytochrome c oxidase assembly protein COX19, putative [Ricinus
           communis] gi|223544899|gb|EEF46414.1| Cytochrome c
           oxidase assembly protein COX19, putative [Ricinus
           communis]
          Length = 94

 Score =  149 bits (377), Expect = 8e-34
 Identities = 70/91 (76%), Positives = 81/91 (89%), Gaps = 1/91 (1%)
 Frame = -3

Query: 537 AAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKKEYLNCLKTAANKSENCREFSKKYLQ 358
           +AGGAFGGNRGLRPVPPEKGIFPLDHMH CDLEKK+YLNCLK++ ++SE CR FSKKYL+
Sbjct: 2   SAGGAFGGNRGLRPVPPEKGIFPLDHMHECDLEKKDYLNCLKSSGHQSEKCRLFSKKYLE 61

Query: 357 CRMEKNLMARQDLAELGFR-ESNAEPPGGKI 268
           CRMEKNLMARQD++ELGFR E + E  G +I
Sbjct: 62  CRMEKNLMARQDMSELGFRKEPDLEASGERI 92


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