BLASTX nr result

ID: Glycyrrhiza23_contig00003566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003566
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pra...   327   2e-87
dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pra...   327   2e-87
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   326   2e-87
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...   323   1e-86
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   323   1e-86

>dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pratense]
           gi|84468330|dbj|BAE71248.1| putative 60S ribosomal
           protein L1 [Trifolium pratense]
          Length = 406

 Score =  327 bits (837), Expect = 2e-87
 Identities = 169/219 (77%), Positives = 181/219 (82%)
 Frame = +1

Query: 1   KEAIKVLKQVGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLVVYGTEGAKAVKAFRN 180
           KEAIKVLK++GAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPL+VYGT+GAKAVKAFRN
Sbjct: 170 KEAIKVLKKIGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRN 229

Query: 181 IPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPXXXXXXXXXXXXX 360
           IPGVE+ANVERLNLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSFDK              
Sbjct: 230 IPGVEIANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDK-------------- 275

Query: 361 XXXXXXXXXXXGYVLPRSKMVNSDLARIINSDEIQSVVRPIKKDVKRATLKKNPLKNLNV 540
                      GYVLPR+KMVNSDL RIINSDE+QSVVRP+KKDVKRATLKKNPLKNLNV
Sbjct: 276 -----GSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPVKKDVKRATLKKNPLKNLNV 330

Query: 541 MLRLNPYAKTAKRMALLAEAQRLXXXXXXXXXXXXTVSK 657
           MLRLNPYAKTAKRMALLAEA+R+            TV+K
Sbjct: 331 MLRLNPYAKTAKRMALLAEAERVKAKKEKLDKKRKTVTK 369


>dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pratense]
          Length = 406

 Score =  327 bits (837), Expect = 2e-87
 Identities = 169/219 (77%), Positives = 181/219 (82%)
 Frame = +1

Query: 1   KEAIKVLKQVGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLVVYGTEGAKAVKAFRN 180
           KEAIKVLK++GAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPL+VYGT+GAKAVKAFRN
Sbjct: 170 KEAIKVLKKIGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRN 229

Query: 181 IPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPXXXXXXXXXXXXX 360
           IPGVE+ANVERLNLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSFDK              
Sbjct: 230 IPGVEIANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDK-------------- 275

Query: 361 XXXXXXXXXXXGYVLPRSKMVNSDLARIINSDEIQSVVRPIKKDVKRATLKKNPLKNLNV 540
                      GYVLPR+KMVNSDL RIINSDE+QSVVRP+KKDVKRATLKKNPLKNLNV
Sbjct: 276 -----GSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPVKKDVKRATLKKNPLKNLNV 330

Query: 541 MLRLNPYAKTAKRMALLAEAQRLXXXXXXXXXXXXTVSK 657
           MLRLNPYAKTAKRMALLAEA+R+            TV+K
Sbjct: 331 MLRLNPYAKTAKRMALLAEAERVKAKKEKLDKKRKTVTK 369


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  326 bits (836), Expect = 2e-87
 Identities = 172/219 (78%), Positives = 180/219 (82%)
 Frame = +1

Query: 1   KEAIKVLKQVGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLVVYGTEGAKAVKAFRN 180
           KEAIKVLKQ+GAFPDAEKAKDS  IRPGKGKMRNRRYISR+GPLVVYGTEGAKAVKAFRN
Sbjct: 169 KEAIKVLKQIGAFPDAEKAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRN 228

Query: 181 IPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPXXXXXXXXXXXXX 360
           +PGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKP             
Sbjct: 229 VPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKP------------- 275

Query: 361 XXXXXXXXXXXGYVLPRSKMVNSDLARIINSDEIQSVVRPIKKDVKRATLKKNPLKNLNV 540
                      GY+LPRSKMVNSDL+RIINSDE+QSVVRPIKKDVKRATLKKNPLKNLN 
Sbjct: 276 ------SEKKKGYLLPRSKMVNSDLSRIINSDEVQSVVRPIKKDVKRATLKKNPLKNLNS 329

Query: 541 MLRLNPYAKTAKRMALLAEAQRLXXXXXXXXXXXXTVSK 657
           ML+LNPYAKTAKRMALLAEAQR+            TVSK
Sbjct: 330 MLKLNPYAKTAKRMALLAEAQRVKVKKEKLDKKRKTVSK 368


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score =  323 bits (829), Expect = 1e-86
 Identities = 169/219 (77%), Positives = 179/219 (81%)
 Frame = +1

Query: 1   KEAIKVLKQVGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLVVYGTEGAKAVKAFRN 180
           KEAIKVLKQ+GAFPDAEKAKDS  IRPGKGKMRNRRYISR+GPL+VYGTEGAKAVKAFRN
Sbjct: 169 KEAIKVLKQIGAFPDAEKAKDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRN 228

Query: 181 IPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPXXXXXXXXXXXXX 360
           +PGVEVANVERLNLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSFDKP             
Sbjct: 229 VPGVEVANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKP------------- 275

Query: 361 XXXXXXXXXXXGYVLPRSKMVNSDLARIINSDEIQSVVRPIKKDVKRATLKKNPLKNLNV 540
                      GY+LPR KMVNSDLARIINSDE+QSVVRPIKKDVK+ATLKKNPLKNLN 
Sbjct: 276 ------SEKKKGYLLPRPKMVNSDLARIINSDEVQSVVRPIKKDVKKATLKKNPLKNLNS 329

Query: 541 MLRLNPYAKTAKRMALLAEAQRLXXXXXXXXXXXXTVSK 657
           ML+LNPYAKTAKRMALLAEAQR+            TVSK
Sbjct: 330 MLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKKRKTVSK 368


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  323 bits (829), Expect = 1e-86
 Identities = 169/219 (77%), Positives = 179/219 (81%)
 Frame = +1

Query: 1   KEAIKVLKQVGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLVVYGTEGAKAVKAFRN 180
           KEAIKVLKQ+GAFPDAEKAKDS  IRPGKGKMRNRRYISR+GPL+VYGTEGAKAVKAFRN
Sbjct: 169 KEAIKVLKQIGAFPDAEKAKDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRN 228

Query: 181 IPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPXXXXXXXXXXXXX 360
           +PGVEVANVERLNLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSFDKP             
Sbjct: 229 VPGVEVANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKP------------- 275

Query: 361 XXXXXXXXXXXGYVLPRSKMVNSDLARIINSDEIQSVVRPIKKDVKRATLKKNPLKNLNV 540
                      GY+LPR KMVNSDLARIINSDE+QSVVRPIKKDVK+ATLKKNPLKNLN 
Sbjct: 276 ------SEKKKGYLLPRPKMVNSDLARIINSDEVQSVVRPIKKDVKKATLKKNPLKNLNS 329

Query: 541 MLRLNPYAKTAKRMALLAEAQRLXXXXXXXXXXXXTVSK 657
           ML+LNPYAKTAKRMALLAEAQR+            TVSK
Sbjct: 330 MLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKKRKTVSK 368


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