BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003548
         (1646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536335.1| PREDICTED: uncharacterized RNA pseudouridine...   544   e-159
gb|AFK43008.1| unknown [Medicago truncatula]                          523   e-150
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   470   e-131
ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|2...   469   e-131
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   469   e-129

>ref|XP_003536335.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Glycine max]
          Length = 399

 Score =  544 bits (1401), Expect(2) = e-159
 Identities = 272/341 (79%), Positives = 294/341 (86%), Gaps = 1/341 (0%)
 Frame = +3

Query: 345  EPDGPMLIPWIVRGEDGNLKLQAEPPPSFLKAIAXXXXXXXXXXXXXXXXXXXXXXXXXX 524
            EPDGP+LIPWIVRGEDGNL+LQ+EPPPS L AIA                          
Sbjct: 61   EPDGPLLIPWIVRGEDGNLRLQSEPPPSLLNAIATAQTGTKKDNKQTKTTAATATNTTKP 120

Query: 525  XXXXTKATAPPKYSKAARRFYNETFKDS-ATRLSKVLAASGVASRRSCEELIFEGKVTVN 701
                 ++TAPP++SKAARRFYN+  K+S A RLSKVLAASGVASRRSCEELIFEGKVTVN
Sbjct: 121  QK--ARSTAPPQHSKAARRFYNQNIKESSAARLSKVLAASGVASRRSCEELIFEGKVTVN 178

Query: 702  GSVCNTPQTRVDPTKDVIYVNGNRLPRRQPQKVYLALNKPKGYICSSGEKESKSVISLFD 881
            G+VCNTPQT+VDP KDVIYVNGNRLP+RQPQKVYLALNKPKGYICSSGE ESKSVISLFD
Sbjct: 179  GTVCNTPQTKVDPAKDVIYVNGNRLPKRQPQKVYLALNKPKGYICSSGENESKSVISLFD 238

Query: 882  DYLGSWGKEHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQRLSHPSFNLSKEYIATID 1061
            DYL SWGK+HPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQ+LSHPS NLSKEYIATID
Sbjct: 239  DYLNSWGKKHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATID 298

Query: 1062 GLVHKRHLIAISDGTTIEGVHCIPDIVELLPREPDMQRARLRIVVHEGRKHEVRELVKSA 1241
            GLVHKRHLIAIS+GTT+EGV C+PD+VELLPR+P+MQR R+RIVVHEGRKHEVRELVK A
Sbjct: 299  GLVHKRHLIAISEGTTVEGVLCVPDVVELLPRQPEMQRTRIRIVVHEGRKHEVRELVKRA 358

Query: 1242 GLEIHSLKRVRIGGFRLPSDLGIGKYIELNPTNLKALGWKS 1364
            GLEIHSLKRVRIGGFRLP DLG+GKYIELN TNL ALGWKS
Sbjct: 359  GLEIHSLKRVRIGGFRLPPDLGLGKYIELNKTNLNALGWKS 399



 Score = 46.6 bits (109), Expect(2) = e-159
 Identities = 30/56 (53%), Positives = 33/56 (58%)
 Frame = +1

Query: 103 MGSAMKLNALPIHSYFFFSKSHTTLTSSFRTLPRLIXXXXXXXXXKFNISFAPPKP 270
           MG+   + AL +H    FSKSHT   S FRTLPRL          KFNISFAPPKP
Sbjct: 1   MGATTAIAALSLHC---FSKSHTHF-SPFRTLPRLTCSFSSSI--KFNISFAPPKP 50


>gb|AFK43008.1| unknown [Medicago truncatula]
          Length = 408

 Score =  523 bits (1348), Expect(2) = e-150
 Identities = 264/338 (78%), Positives = 285/338 (84%), Gaps = 1/338 (0%)
 Frame = +3

Query: 345  EPDGPMLIPWIVRGEDGNLKLQAEPPPSFLKAIAXXXXXXXXXXXXXXXXXXXXXXXXXX 524
            + +GP++IPWIVRGEDGN KL +EPPPSFLK +A                          
Sbjct: 66   DDEGPLMIPWIVRGEDGNFKLLSEPPPSFLKEMANAQTGTKKSEKDQITKNKKKGEKETK 125

Query: 525  XXXXTKATAPPKYSKAARRFYNETFKD-SATRLSKVLAASGVASRRSCEELIFEGKVTVN 701
                   TAPPKYSKAARRFYNE  KD S TRLSKVLAASGVASRRSCE+LIF+GKVTVN
Sbjct: 126  IRA---VTAPPKYSKAARRFYNENIKDDSGTRLSKVLAASGVASRRSCEDLIFKGKVTVN 182

Query: 702  GSVCNTPQTRVDPTKDVIYVNGNRLPRRQPQKVYLALNKPKGYICSSGEKESKSVISLFD 881
            GSVCNTPQT+VDP+KD IYVNG+RLP+RQP KVYLALNKPKGYICSSGEKESKSVISLFD
Sbjct: 183  GSVCNTPQTKVDPSKDNIYVNGSRLPKRQPHKVYLALNKPKGYICSSGEKESKSVISLFD 242

Query: 882  DYLGSWGKEHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQRLSHPSFNLSKEYIATID 1061
            D+L SW K+HPGVP PRLFTVGRLDVATTGL+IVTNDGDFAQ+LSHPS N SKEYIAT+D
Sbjct: 243  DFLSSWDKKHPGVPPPRLFTVGRLDVATTGLLIVTNDGDFAQKLSHPSSNFSKEYIATVD 302

Query: 1062 GLVHKRHLIAISDGTTIEGVHCIPDIVELLPREPDMQRARLRIVVHEGRKHEVRELVKSA 1241
            GLVHKRHL AIS+GTTIEGVHC+PD VELLPR PD QR+RLRIVVH+GRKHEVRELVKSA
Sbjct: 303  GLVHKRHLTAISEGTTIEGVHCVPDSVELLPRMPDTQRSRLRIVVHDGRKHEVRELVKSA 362

Query: 1242 GLEIHSLKRVRIGGFRLPSDLGIGKYIELNPTNLKALG 1355
            GLEIHSLKRVRIGGFRLP DLGIGKYIELNPTNLKALG
Sbjct: 363  GLEIHSLKRVRIGGFRLPPDLGIGKYIELNPTNLKALG 400



 Score = 36.6 bits (83), Expect(2) = e-150
 Identities = 29/58 (50%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 103 MGSA--MKLNALPIHSYFFFSKSHTTLTSSFRTLPRLIXXXXXXXXXKFNISFAPPKP 270
           MGSA  M + AL    YF   KS T LTS+FRTLPR           KFNISF+P  P
Sbjct: 1   MGSAATMAMTAL----YFTTIKS-TKLTSTFRTLPRF----TCSSSSKFNISFSPSNP 49


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  470 bits (1210), Expect(2) = e-131
 Identities = 237/337 (70%), Positives = 268/337 (79%)
 Frame = +3

Query: 354  GPMLIPWIVRGEDGNLKLQAEPPPSFLKAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 533
            G + IPWIVRGEDGNLKLQ+ PP  FL +++                             
Sbjct: 78   GQLFIPWIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVSAGKPI------------ 125

Query: 534  XTKATAPPKYSKAARRFYNETFKDSATRLSKVLAASGVASRRSCEELIFEGKVTVNGSVC 713
                T PPK+SKAARRFYNE  ++S+ RLSKVLAA+GVASRRS EELIF G+VTVNGSVC
Sbjct: 126  ----TEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVC 181

Query: 714  NTPQTRVDPTKDVIYVNGNRLPRRQPQKVYLALNKPKGYICSSGEKESKSVISLFDDYLG 893
            NTPQTRVDP +D+IYVNGNRLP++ P KVYLALNKPKGYICSSG+KESKSVISLFDDYL 
Sbjct: 182  NTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLK 241

Query: 894  SWGKEHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQRLSHPSFNLSKEYIATIDGLVH 1073
            SW K +PG P PRLFTVGRLDVATTGLIIVTNDGDFAQ +SHPS  LSKEYIA IDG V 
Sbjct: 242  SWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTVS 301

Query: 1074 KRHLIAISDGTTIEGVHCIPDIVELLPREPDMQRARLRIVVHEGRKHEVRELVKSAGLEI 1253
            K++LIAIS+GT I+GVHC PD VELLPR+PD+ ++RLRIVVHEGR HEVRELVK+AGLEI
Sbjct: 302  KQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVRELVKAAGLEI 361

Query: 1254 HSLKRVRIGGFRLPSDLGIGKYIELNPTNLKALGWKS 1364
            +SLKRVRIGGFRLPSDLG+G Y EL  + LKA+GWKS
Sbjct: 362  YSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIGWKS 398



 Score = 25.4 bits (54), Expect(2) = e-131
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 238 KFNISFAPPKP 270
           +FNI+FAPPKP
Sbjct: 49  EFNITFAPPKP 59


>ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|222851815|gb|EEE89362.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  469 bits (1206), Expect(2) = e-131
 Identities = 236/338 (69%), Positives = 263/338 (77%)
 Frame = +3

Query: 348  PDGPMLIPWIVRGEDGNLKLQAEPPPSFLKAIAXXXXXXXXXXXXXXXXXXXXXXXXXXX 527
            P G + IPWIVRGEDGNLKLQ+ PP   + AIA                           
Sbjct: 67   PPGQLFIPWIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVK----- 121

Query: 528  XXXTKATAPPKYSKAARRFYNETFKDSATRLSKVLAASGVASRRSCEELIFEGKVTVNGS 707
                K  A P  SKAARRFYNE F+D A RLSKVLAA+GVASRRS E LIFEGKVTVNGS
Sbjct: 122  ---AKLEAEPTRSKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGS 178

Query: 708  VCNTPQTRVDPTKDVIYVNGNRLPRRQPQKVYLALNKPKGYICSSGEKESKSVISLFDDY 887
            VCNTPQTRVDP +D IYVNGNRLP++ P K+Y+ALNKPKGYICS GEKESKSV+ L DDY
Sbjct: 179  VCNTPQTRVDPGRDSIYVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDY 238

Query: 888  LGSWGKEHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQRLSHPSFNLSKEYIATIDGL 1067
              SW K +PG+P PRLFTVGRLDVATTGLIIVTNDGDFAQ+++HPS NLSKEYIAT+DG+
Sbjct: 239  FQSWDKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGV 298

Query: 1068 VHKRHLIAISDGTTIEGVHCIPDIVELLPREPDMQRARLRIVVHEGRKHEVRELVKSAGL 1247
            V KRHL A+S+GT IEGV C+PD VELLP++PD  R RLRIVVHEGR HEVRELVK+AGL
Sbjct: 299  VSKRHLFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVRELVKNAGL 358

Query: 1248 EIHSLKRVRIGGFRLPSDLGIGKYIELNPTNLKALGWK 1361
            EIHSLKRVRIGGFRLPSDLG+GK+ EL  T+LK LGWK
Sbjct: 359  EIHSLKRVRIGGFRLPSDLGLGKHAELKQTDLKTLGWK 396



 Score = 26.9 bits (58), Expect(2) = e-131
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 112 AMKLNALPIHSYFFFSKSHTTLTSSFRTLPRLIXXXXXXXXXKFNISFAPPKP 270
           A  L+ L +H    F +       S   L + I         +FNI+FAPPKP
Sbjct: 2   AASLSTLHLHHQLTFFRK-----PSLSLLNKSIRPTRITASLEFNITFAPPKP 49


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  469 bits (1206), Expect = e-129
 Identities = 234/335 (69%), Positives = 269/335 (80%)
 Frame = +3

Query: 360  MLIPWIVRGEDGNLKLQAEPPPSFLKAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 539
            +LIPWIVR E+GNL++Q+ PP  +L+ +A                               
Sbjct: 71   LLIPWIVRDENGNLRVQSTPPERYLQDMAKAKALSAKKKKKKEESTARA----------- 119

Query: 540  KATAPPKYSKAARRFYNETFKDSATRLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNT 719
                 PKYSKAARRFYNE F+D   RLSKVLAA+GVASRR+ EELIFEG+VTVNGSVCNT
Sbjct: 120  -VAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNT 178

Query: 720  PQTRVDPTKDVIYVNGNRLPRRQPQKVYLALNKPKGYICSSGEKESKSVISLFDDYLGSW 899
            PQTRVDP +D+IYVNGNRLP++ P KVYLALNKPKGYICSSGEKESKSV+ LFDDYL SW
Sbjct: 179  PQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSW 238

Query: 900  GKEHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQRLSHPSFNLSKEYIATIDGLVHKR 1079
             K++PGVP PR+FTVGRLDVATTGLII+TNDGDFAQ+LSHPS  LSKEYIATIDG+V+KR
Sbjct: 239  NKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKR 298

Query: 1080 HLIAISDGTTIEGVHCIPDIVELLPREPDMQRARLRIVVHEGRKHEVRELVKSAGLEIHS 1259
            HLIAIS+GT IEGVHC PD VELLP +P++ + RLR+VVHEGR HEVRELVKSAGL+IHS
Sbjct: 299  HLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHS 358

Query: 1260 LKRVRIGGFRLPSDLGIGKYIELNPTNLKALGWKS 1364
            LKR+RIGGFRLPSDLG GK++EL   +LKALGWKS
Sbjct: 359  LKRIRIGGFRLPSDLGHGKHVELKQGDLKALGWKS 393