BLASTX nr result
ID: Glycyrrhiza23_contig00003538
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00003538 (1071 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003555206.1| PREDICTED: hippocampus abundant transcript 1... 283 4e-74 ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1... 283 4e-74 ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1... 203 7e-50 ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1... 203 7e-50 ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2... 196 1e-47 >ref|XP_003555206.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine max] Length = 443 Score = 283 bits (725), Expect = 4e-74 Identities = 135/162 (83%), Positives = 152/162 (93%) Frame = -2 Query: 1070 MITGIGATLSQLFFMPILVPAIGEEKLLTTGLLVSCINIFIYSISWASWVPYALAGCSIF 891 MITGIGATL+QLFFMPILVP IGEEKLL+TGLL+SCIN+F+YSI+W +WVPYALAGCS+F Sbjct: 282 MITGIGATLAQLFFMPILVPVIGEEKLLSTGLLISCINVFVYSIAWTAWVPYALAGCSVF 341 Query: 890 GVFVRPTICSIASKQVGPNEQGMVQGCLSGITSIANIISPLIFSPLTALFLSEQAPFNFP 711 VFVRP++CSIASKQVGP EQGMVQGCLS I+S ANII+PLIFSPLTALFLSE+APF FP Sbjct: 342 AVFVRPSLCSIASKQVGPTEQGMVQGCLSAISSFANIIAPLIFSPLTALFLSEEAPFYFP 401 Query: 710 GFSILCLGLILMVAFFLSLMIRAVPPIAGGKTSSNRCTETLV 585 GFS++CLGL LMVAFF SL+IRAVPPIAGGK SSNRCT+TLV Sbjct: 402 GFSLMCLGLALMVAFFQSLIIRAVPPIAGGKISSNRCTDTLV 443 >ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine max] Length = 443 Score = 283 bits (725), Expect = 4e-74 Identities = 135/162 (83%), Positives = 151/162 (93%) Frame = -2 Query: 1070 MITGIGATLSQLFFMPILVPAIGEEKLLTTGLLVSCINIFIYSISWASWVPYALAGCSIF 891 MITGIGATL+QLFFMPILVP IGEEKLL+TGLL+SCIN+F+YSI+W +WVPYALAGCS+F Sbjct: 282 MITGIGATLAQLFFMPILVPVIGEEKLLSTGLLISCINVFVYSIAWTAWVPYALAGCSVF 341 Query: 890 GVFVRPTICSIASKQVGPNEQGMVQGCLSGITSIANIISPLIFSPLTALFLSEQAPFNFP 711 VFVRP++CSIASKQVGP EQGMVQGCLS I+S ANII+PLIFSPLTALFLSE+APF FP Sbjct: 342 AVFVRPSLCSIASKQVGPTEQGMVQGCLSAISSFANIIAPLIFSPLTALFLSEEAPFYFP 401 Query: 710 GFSILCLGLILMVAFFLSLMIRAVPPIAGGKTSSNRCTETLV 585 GFS++CLGL LMVAFF SLMIRAVPPIAGGK S NRCT+TLV Sbjct: 402 GFSLMCLGLALMVAFFQSLMIRAVPPIAGGKISGNRCTDTLV 443 >ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis vinifera] gi|302141709|emb|CBI18912.3| unnamed protein product [Vitis vinifera] Length = 442 Score = 203 bits (516), Expect = 7e-50 Identities = 101/159 (63%), Positives = 121/159 (76%) Frame = -2 Query: 1070 MITGIGATLSQLFFMPILVPAIGEEKLLTTGLLVSCINIFIYSISWASWVPYALAGCSIF 891 MI+GI T+SQL MPIL P IGEEKLL GLL SC ++F+YSI+W+ WVPYA A SI Sbjct: 283 MISGIAGTISQLVLMPILAPTIGEEKLLAIGLLFSCSHMFLYSIAWSFWVPYAAAMFSIL 342 Query: 890 GVFVRPTICSIASKQVGPNEQGMVQGCLSGITSIANIISPLIFSPLTALFLSEQAPFNFP 711 VF P I SIASKQVGP+EQG VQGC+SGI+S A+++SPL F+PLTALFLS+ APFNFP Sbjct: 343 IVFAPPCIRSIASKQVGPSEQGKVQGCISGISSFAHLVSPLAFTPLTALFLSDGAPFNFP 402 Query: 710 GFSILCLGLILMVAFFLSLMIRAVPPIAGGKTSSNRCTE 594 GFSI+C+G M+AF SL IRA PPI+ K + TE Sbjct: 403 GFSIMCIGFASMIAFLQSLTIRAAPPISNKKVGNCSYTE 441 >ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis vinifera] gi|297744560|emb|CBI37822.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 203 bits (516), Expect = 7e-50 Identities = 97/155 (62%), Positives = 119/155 (76%) Frame = -2 Query: 1070 MITGIGATLSQLFFMPILVPAIGEEKLLTTGLLVSCINIFIYSISWASWVPYALAGCSIF 891 +I G+ T+SQL FMP+L P + EEKLL+ GL + C NIF+ SI+W+ WVPYA+A + F Sbjct: 282 LIVGVMGTISQLLFMPLLAPRVSEEKLLSIGLFMGCTNIFLNSIAWSFWVPYAIAALAAF 341 Query: 890 GVFVRPTICSIASKQVGPNEQGMVQGCLSGITSIANIISPLIFSPLTALFLSEQAPFNFP 711 VF P + SIASKQVGPNEQG QGC+SGI+S A IISPLIFSPLTALFLS+ APF FP Sbjct: 342 AVFANPCVRSIASKQVGPNEQGKAQGCISGISSSAQIISPLIFSPLTALFLSQGAPFYFP 401 Query: 710 GFSILCLGLILMVAFFLSLMIRAVPPIAGGKTSSN 606 GFSI+C+G M+AF S MIRAVPPI+ TS++ Sbjct: 402 GFSIMCIGFASMIAFIQSTMIRAVPPISSQPTSNS 436 >ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1| predicted protein [Populus trichocarpa] Length = 447 Score = 196 bits (497), Expect = 1e-47 Identities = 94/155 (60%), Positives = 117/155 (75%) Frame = -2 Query: 1070 MITGIGATLSQLFFMPILVPAIGEEKLLTTGLLVSCINIFIYSISWASWVPYALAGCSIF 891 +ITGI TLSQL MPIL PA+GE +LL GL +C+++F+YSI+W WVPY A S+ Sbjct: 288 VITGIAGTLSQLVLMPILAPALGEARLLAVGLFFTCVHVFLYSIAWTFWVPYVAAMFSVL 347 Query: 890 GVFVRPTICSIASKQVGPNEQGMVQGCLSGITSIANIISPLIFSPLTALFLSEQAPFNFP 711 VF +P + SI SKQVG EQG QGC+SGI+S AN+ISPL+FSPLTALFLSE+APF+FP Sbjct: 348 IVFSQPCMRSIVSKQVGSCEQGKAQGCISGISSFANVISPLLFSPLTALFLSERAPFHFP 407 Query: 710 GFSILCLGLILMVAFFLSLMIRAVPPIAGGKTSSN 606 GFSI+C+G M+AF SLMIR PPIA K ++ Sbjct: 408 GFSIMCVGFASMIAFIQSLMIRIAPPIANEKVCNS 442