BLASTX nr result

ID: Glycyrrhiza23_contig00003518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003518
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35237.1| unknown [Lotus japonicus]                              360   3e-97
gb|AFK42205.1| unknown [Medicago truncatula]                          291   2e-76
ref|XP_003592508.1| Endo-1 4-beta-xylanase [Medicago truncatula]...   289   1e-75
gb|ACU21444.1| unknown [Glycine max]                                  239   2e-63
ref|XP_003517597.1| PREDICTED: uncharacterized protein LOC100819...   196   1e-47

>gb|AFK35237.1| unknown [Lotus japonicus]
          Length = 330

 Score =  360 bits (924), Expect = 3e-97
 Identities = 199/315 (63%), Positives = 215/315 (68%), Gaps = 28/315 (8%)
 Frame = -3

Query: 981 EPSPKRHRRDGKQERERDR------------------VTTNGGG----DHNHMDRDQRNL 868
           EPSPKR+RRDGKQ+RERDR                  VTTNGGG    D N  DRDQRNL
Sbjct: 18  EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNL 77

Query: 867 PLPHHSKQEPADAAHKKSNPNDHHEPPKHSSQPPRSCSHYQHDRRDSTGQDGRSAGRREA 688
           P P HSKQE   A  KKSN  DH EPPKHS+QPPRS S+YQH  R +T Q GRSAGRREA
Sbjct: 78  PPPPHSKQESVGAGDKKSN--DHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREA 135

Query: 687 GGKVFTQGKENNERVETGQRKEQRDDKSQIKLDDNFQRRDGFXXXXXXXXXXXXXXPAFR 508
           GGK F Q KEN+ERVET Q +EQRD+KSQ KLDDN  RRDG               PAFR
Sbjct: 136 GGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFR 195

Query: 507 EKKIPVDSGDANLA-ATVTVKSGHTDHPPERN----ERSSNPSHMDRPEKQITEDRAPNK 343
           EKKI  DSGDAN A +T  VK+ HTDHPPERN    ERS NP H++R EKQI  DRAPN+
Sbjct: 196 EKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNR 255

Query: 342 REARRDGFSS-XXXXXXXXXXXXXXRDKFNGRQGYHPIKTRTEKWKHDLYQEVNKDPIPK 166
            E RRDGFSS               RDKFN RQGYHPIKTRTEKWKHDL+QE + DP+PK
Sbjct: 256 SEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKHDLFQEADNDPVPK 315

Query: 165 NEDDQIAKLEALLAS 121
           NEDDQIAKLEALLAS
Sbjct: 316 NEDDQIAKLEALLAS 330


>gb|AFK42205.1| unknown [Medicago truncatula]
          Length = 261

 Score =  291 bits (745), Expect = 2e-76
 Identities = 168/292 (57%), Positives = 185/292 (63%), Gaps = 5/292 (1%)
 Frame = -3

Query: 981 EPSPKRHRRDGKQERERDRVTTNGGGDHNHMDRDQRNLPLPHHSKQEPADAAHKKSNPND 802
           EPSPK++RRD    RER+R+TTNG                                    
Sbjct: 19  EPSPKKYRRD----RERERLTTNG------------------------------------ 38

Query: 801 HHEPPKHSSQPPRSCSHYQHDRRDSTGQDGRSAGRREAGGKVFTQGKENNERVETGQRKE 622
           H EP KHSSQPPRS S+YQ          GRS G+REA  KV+ Q KENN+R+ETGQ +E
Sbjct: 39  HSEPSKHSSQPPRSRSYYQV---------GRSTGQREADEKVYAQSKENNQRLETGQSRE 89

Query: 621 QRDDKSQIKLDDNFQRRDGFXXXXXXXXXXXXXXPAFREKKIPVDSGDANLAATVTVKSG 442
           QRD+KS  KLD NFQRRD F              PAFREKKIPVDS +AN AATVTVKS 
Sbjct: 90  QRDEKSLAKLDGNFQRRDSFRERKDDPTPSVRKRPAFREKKIPVDSREANPAATVTVKSS 149

Query: 441 HTDHPPERN----ERSSNPSHMDRPEKQITEDRAPNKREARRDGFSS-XXXXXXXXXXXX 277
           HT HPPERN    ERSSNP+H+DRPEK+I EDR  NKRE R+DGFSS             
Sbjct: 150 HTSHPPERNERKEERSSNPNHLDRPEKRIAEDRESNKREPRKDGFSSRVRYGGSGGNSNH 209

Query: 276 XXRDKFNGRQGYHPIKTRTEKWKHDLYQEVNKDPIPKNEDDQIAKLEALLAS 121
             RDKFNGRQ  HPIKT+TEKWKHDLYQEVNKD IPKNEDDQIAKLEALLAS
Sbjct: 210 RGRDKFNGRQDNHPIKTQTEKWKHDLYQEVNKDSIPKNEDDQIAKLEALLAS 261


>ref|XP_003592508.1| Endo-1 4-beta-xylanase [Medicago truncatula]
           gi|355481556|gb|AES62759.1| Endo-1 4-beta-xylanase
           [Medicago truncatula]
          Length = 671

 Score =  289 bits (739), Expect = 1e-75
 Identities = 166/292 (56%), Positives = 185/292 (63%), Gaps = 5/292 (1%)
 Frame = -3

Query: 981 EPSPKRHRRDGKQERERDRVTTNGGGDHNHMDRDQRNLPLPHHSKQEPADAAHKKSNPND 802
           EPSPK++RRD    RER+R+TTNG                                    
Sbjct: 19  EPSPKKYRRD----RERERLTTNG------------------------------------ 38

Query: 801 HHEPPKHSSQPPRSCSHYQHDRRDSTGQDGRSAGRREAGGKVFTQGKENNERVETGQRKE 622
           H EP KHSSQPPRS S+YQ          GRS G+REA  KV+ Q KENN+R+ETGQ +E
Sbjct: 39  HSEPSKHSSQPPRSRSYYQV---------GRSTGQREADEKVYAQSKENNQRLETGQSRE 89

Query: 621 QRDDKSQIKLDDNFQRRDGFXXXXXXXXXXXXXXPAFREKKIPVDSGDANLAATVTVKSG 442
           QRD+KS  KLD NFQRRD F              PAFREKKIPVDS +AN AATVTVKS 
Sbjct: 90  QRDEKSLAKLDGNFQRRDSFRERKDDPTPSVRKRPAFREKKIPVDSREANPAATVTVKSS 149

Query: 441 HTDHPPERN----ERSSNPSHMDRPEKQITEDRAPNKREARRDGFSS-XXXXXXXXXXXX 277
           HT HPPERN    ERSSNP+H+DRPEK+I EDR  NKRE R+DGFSS             
Sbjct: 150 HTSHPPERNERKEERSSNPNHLDRPEKRIAEDRESNKREPRKDGFSSRVRYGGSGGNSNH 209

Query: 276 XXRDKFNGRQGYHPIKTRTEKWKHDLYQEVNKDPIPKNEDDQIAKLEALLAS 121
             RDKFNGRQ  HPIKT+TEKWKHDLYQEVNKD IPKNEDDQIAKLEALL++
Sbjct: 210 RGRDKFNGRQDNHPIKTQTEKWKHDLYQEVNKDSIPKNEDDQIAKLEALLSN 261


>gb|ACU21444.1| unknown [Glycine max]
          Length = 233

 Score =  239 bits (610), Expect(2) = 2e-63
 Identities = 136/226 (60%), Positives = 156/226 (69%), Gaps = 5/226 (2%)
 Frame = -3

Query: 981 EPSPKRHRRDGKQERERDRVTTNGGGDHNHMDRDQRNLPLPHHSKQEPADAAHKKSNPND 802
           E SPKR+RRD       +RVT++GG        D+RN P  HHS++EP DAA KKSN ND
Sbjct: 18  EASPKRYRRDS------NRVTSDGG--------DRRNPP--HHSRREPFDAAPKKSNSND 61

Query: 801 HHE-PPKHSSQPPRSCSHYQHDRRDSTGQDGRSAGRREAGGKVFTQGKENNERVETGQRK 625
           HHE PP+H SQPPRS S++QHD R STGQ GRS+G+REAGGKVFTQ KENNE     Q  
Sbjct: 62  HHENPPQHLSQPPRSRSYHQHDERGSTGQVGRSSGQREAGGKVFTQSKENNE----SQST 117

Query: 624 EQRDDKSQIKLDDNFQRRDGFXXXXXXXXXXXXXXPAFREKKIPVDSGDANLAATVTVKS 445
           EQ+D+KSQ+KLD+N Q+RDGF               AFRE KIP DS DAN A+ V VKS
Sbjct: 118 EQKDEKSQVKLDNNLQKRDGF-AERKDAPPTMRKMRAFRE-KIPADSADANPASMVEVKS 175

Query: 444 GHTDHPPERN----ERSSNPSHMDRPEKQITEDRAPNKREARRDGF 319
            HT HPPERN    ERSSNP H+DRPEKQI EDR PNK EAR+  F
Sbjct: 176 SHTAHPPERNERKEERSSNPHHLDRPEKQIAEDRTPNKTEARKGWF 221



 Score = 30.8 bits (68), Expect(2) = 2e-63
 Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -2

Query: 331 EGWLFIKGKVWG-WRQ 287
           +GW FIK KVWG WRQ
Sbjct: 218 KGWFFIKSKVWGQWRQ 233


>ref|XP_003517597.1| PREDICTED: uncharacterized protein LOC100819584 [Glycine max]
          Length = 249

 Score =  196 bits (497), Expect = 1e-47
 Identities = 134/288 (46%), Positives = 160/288 (55%), Gaps = 5/288 (1%)
 Frame = -3

Query: 969 KRHRRD--GKQERERDRVTTNGGGDHNHMDRDQRNLPLPHHSKQEPADAAHKKSNPNDHH 796
           KR+RRD  GK+ERER    TN           Q   P   H+K            PND  
Sbjct: 23  KRYRRDEYGKEERERVMSRTNV----------QNEAPFSKHNK------------PND-- 58

Query: 795 EPPKHSSQPPRSCSHYQHDRRDSTGQDGRSAGRREAGGKVFTQG--KENNERVETGQRKE 622
                  Q P S S++QHD RD TGQ G S+  R+A  + + +   K+ NE  +T   +E
Sbjct: 59  -----PIQLPSSLSYFQHDERDGTGQVGLSSVSRKASERGWWKDTKKQLNEMEQTSHGRE 113

Query: 621 QRDDKSQIKLDDN-FQRRDGFXXXXXXXXXXXXXXPAFREKKIPVDSGDANLAATVTVKS 445
           QR++KSQ KLDDN FQRRDGF               AFREKKI VDSGDAN+AA   VKS
Sbjct: 114 QRNEKSQAKLDDNTFQRRDGFTERSRKRP-------AFREKKIVVDSGDANVAA---VKS 163

Query: 444 GHTDHPPERNERSSNPSHMDRPEKQITEDRAPNKREARRDGFSSXXXXXXXXXXXXXXRD 265
                  ++ ER+SNP H+DRPEK   +D+   +R  R  G  S               D
Sbjct: 164 S------QKEERNSNPQHLDRPEKHFADDKGEARRGRRYGGNDSYKGR-----------D 206

Query: 264 KFNGRQGYHPIKTRTEKWKHDLYQEVNKDPIPKNEDDQIAKLEALLAS 121
           KFNGR+GY     R+EKWKHDLYQEVNKDPIP+NEDDQIAKLEALLAS
Sbjct: 207 KFNGRRGY-----RSEKWKHDLYQEVNKDPIPQNEDDQIAKLEALLAS 249


Top