BLASTX nr result

ID: Glycyrrhiza23_contig00003517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003517
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544945.1| PREDICTED: cytochrome b-c1 complex subunit 8...   136   3e-30
ref|XP_003519298.1| PREDICTED: cytochrome b-c1 complex subunit 8...   135   6e-30
gb|AFK33951.1| unknown [Medicago truncatula]                          130   8e-30
gb|AFK46589.1| unknown [Medicago truncatula]                          132   5e-29
gb|AFK44447.1| unknown [Medicago truncatula]                          130   2e-28

>ref|XP_003544945.1| PREDICTED: cytochrome b-c1 complex subunit 8-like [Glycine max]
          Length = 72

 Score =  136 bits (343), Expect = 3e-30
 Identities = 63/72 (87%), Positives = 68/72 (94%)
 Frame = +2

Query: 17  MGKQIVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISAILLVGPVVGTYSYAQ 196
           MGKQ+VPVKSVIYALSPFQQKIM GLWKDLPTKIHHKVSENWISA LL+GP+VGTY+Y Q
Sbjct: 1   MGKQVVPVKSVIYALSPFQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGTYAYVQ 60

Query: 197 HYCEKEKLAHRY 232
           +Y EKEKLAHRY
Sbjct: 61  NYLEKEKLAHRY 72


>ref|XP_003519298.1| PREDICTED: cytochrome b-c1 complex subunit 8 [Glycine max]
          Length = 72

 Score =  135 bits (341), Expect = 6e-30
 Identities = 63/72 (87%), Positives = 68/72 (94%)
 Frame = +2

Query: 17  MGKQIVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISAILLVGPVVGTYSYAQ 196
           MGKQIVPVKSVIYALSPFQQKIM GLWKDLPTKIHHKVSENWISA LL+GP+VGTY+Y Q
Sbjct: 1   MGKQIVPVKSVIYALSPFQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGTYTYVQ 60

Query: 197 HYCEKEKLAHRY 232
           +Y EKEKL+HRY
Sbjct: 61  NYLEKEKLSHRY 72


>gb|AFK33951.1| unknown [Medicago truncatula]
          Length = 88

 Score =  130 bits (326), Expect(2) = 8e-30
 Identities = 61/71 (85%), Positives = 65/71 (91%)
 Frame = +2

Query: 17  MGKQIVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISAILLVGPVVGTYSYAQ 196
           MGK IVPVKSV+YALSPFQQKIM GLWKDLPTKIHHKVSENWISA+LLV PVVGTYSYA 
Sbjct: 1   MGKNIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWISALLLVVPVVGTYSYAM 60

Query: 197 HYCEKEKLAHR 229
           H+ E+EKL HR
Sbjct: 61  HFVEQEKLHHR 71



 Score = 26.6 bits (57), Expect(2) = 8e-30
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +1

Query: 226 QVLSSCENRLDNL 264
           +VLSSCE+RLDNL
Sbjct: 71  RVLSSCEDRLDNL 83


>gb|AFK46589.1| unknown [Medicago truncatula]
          Length = 72

 Score =  132 bits (333), Expect = 5e-29
 Identities = 62/72 (86%), Positives = 66/72 (91%)
 Frame = +2

Query: 17  MGKQIVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISAILLVGPVVGTYSYAQ 196
           MGK IVPVKSV+YALSPFQQKIM GLWKDLPTKIHHKVSENWISA+LLV PVVGTYSYA 
Sbjct: 1   MGKNIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWISALLLVVPVVGTYSYAM 60

Query: 197 HYCEKEKLAHRY 232
           H+ E+EKL HRY
Sbjct: 61  HFVEQEKLHHRY 72


>gb|AFK44447.1| unknown [Medicago truncatula]
          Length = 72

 Score =  130 bits (328), Expect = 2e-28
 Identities = 61/72 (84%), Positives = 65/72 (90%)
 Frame = +2

Query: 17  MGKQIVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISAILLVGPVVGTYSYAQ 196
           MGK IVPVKSV+YALSPFQQKIM GLWKDLPTKIHHKVSENWI A+LLV PVVGTYSYA 
Sbjct: 1   MGKTIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWIGALLLVVPVVGTYSYAM 60

Query: 197 HYCEKEKLAHRY 232
           H+ E+EKL HRY
Sbjct: 61  HFVEQEKLHHRY 72


Top