BLASTX nr result

ID: Glycyrrhiza23_contig00003505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003505
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB85638.1| succinate dehydrogenase subunit 4 [Pisum sativum...   305   8e-81
gb|AFK37383.1| unknown [Medicago truncatula]                          297   2e-78
ref|XP_003523057.1| PREDICTED: uncharacterized protein LOC100779...   254   2e-65
ref|NP_001236184.1| uncharacterized protein LOC100500565 [Glycin...   229   1e-57
ref|XP_003601292.1| Succinate dehydrogenase subunit [Medicago tr...   117   6e-24

>dbj|BAB85638.1| succinate dehydrogenase subunit 4 [Pisum sativum]
           gi|19032304|dbj|BAB85639.1| succinate dehydrogenase
           subunit 4 [Pisum sativum]
          Length = 223

 Score =  305 bits (782), Expect = 8e-81
 Identities = 164/223 (73%), Positives = 174/223 (78%), Gaps = 14/223 (6%)
 Frame = -2

Query: 849 MQSISLTLSKRLSK-SHPLWRISPNLVAHXXXXXXXXXXXXXPISG-------------T 712
           MQS+SL L KRLS  S P WRIS NL+AH             PIS              T
Sbjct: 1   MQSLSLRLGKRLSDASKPHWRISSNLIAHASTTSSSPSPPSPPISAATNDTTSALNNLLT 60

Query: 711 APWSASQTRGIRLSGSDVRVGNLIENRGRAYEVLKLYHSHEGTGKAAIKVPPHTVAGYXX 532
           APW ASQTRG+  SGSDVRVGNL ENRGRAYEVLKLY+SHEGTGKAAIKVPPHTVAGY  
Sbjct: 61  APWFASQTRGLTFSGSDVRVGNLFENRGRAYEVLKLYNSHEGTGKAAIKVPPHTVAGYAT 120

Query: 531 XXXXTGDDIKRMERNSALRNQGPKTKREQLLKVTAAVPLLLIYPNAYSLLLANFFVFWHI 352
               T DDIKR ERNS LRNQG KTKREQLLK+TAAVPLLL+YPNAYSLL ANFFVFWHI
Sbjct: 121 VAATTEDDIKRKERNSGLRNQGLKTKREQLLKITAAVPLLLVYPNAYSLLAANFFVFWHI 180

Query: 351 NAGIQEILADYVHHEMTREFVFISLRVFLIIAMKDVFLNFVFV 223
           NAGI+EILADYVHHEMTREF+FISLR+FLIIA+KDVFLNFVFV
Sbjct: 181 NAGIEEILADYVHHEMTREFIFISLRLFLIIAIKDVFLNFVFV 223


>gb|AFK37383.1| unknown [Medicago truncatula]
          Length = 225

 Score =  297 bits (761), Expect = 2e-78
 Identities = 164/226 (72%), Positives = 172/226 (76%), Gaps = 17/226 (7%)
 Frame = -2

Query: 849 MQSISLTLSKRLSKS-HPLWRISPNLVAHXXXXXXXXXXXXXPISG-------------- 715
           MQS++L L KRLS S HP WRISPN +AH             PIS               
Sbjct: 1   MQSVALKLGKRLSNSSHPHWRISPNFIAHASTTSSSPSPPSPPISAAENATTTASTLNNL 60

Query: 714 -TAPWSASQTRGIRLSGSDVRVGNLIENRGRAYE-VLKLYHSHEGTGKAAIKVPPHTVAG 541
            TAPWSASQTRG   SGSDVRVGNLIENRGRAYE VL+ YHS EGTGKAAIKVPPHTVAG
Sbjct: 61  LTAPWSASQTRGFTFSGSDVRVGNLIENRGRAYEQVLRRYHSLEGTGKAAIKVPPHTVAG 120

Query: 540 YXXXXXXTGDDIKRMERNSALRNQGPKTKREQLLKVTAAVPLLLIYPNAYSLLLANFFVF 361
           Y         DIKR ERNS LRNQGPKTKREQLLKVTAAVPLLLIYPNAYSLL ANFF+F
Sbjct: 121 YATAATAGEVDIKR-ERNSGLRNQGPKTKREQLLKVTAAVPLLLIYPNAYSLLAANFFIF 179

Query: 360 WHINAGIQEILADYVHHEMTREFVFISLRVFLIIAMKDVFLNFVFV 223
           WHINAGI+EILADYVHHEMTREFV ISLR+FLIIA+KDVFLNFVFV
Sbjct: 180 WHINAGIEEILADYVHHEMTREFVLISLRLFLIIAIKDVFLNFVFV 225


>ref|XP_003523057.1| PREDICTED: uncharacterized protein LOC100779728 [Glycine max]
          Length = 215

 Score =  254 bits (650), Expect = 2e-65
 Identities = 142/217 (65%), Positives = 159/217 (73%), Gaps = 8/217 (3%)
 Frame = -2

Query: 849 MQSISLTLSKRLSKSHPLWRISPNLVAHXXXXXXXXXXXXXPISG--------TAPWSAS 694
           MQS+SLTLSKRLS S PL+RIS +LVAH             P+          TAPWSA+
Sbjct: 1   MQSMSLTLSKRLSNSKPLFRISSSLVAHASSATTSPPPPSPPVPSPSALNSLLTAPWSAT 60

Query: 693 QTRGIRLSGSDVRVGNLIENRGRAYEVLKLYHSHEGTGKAAIKVPPHTVAGYXXXXXXTG 514
           Q+RGI LSGSD+RVGNLI NRGRA+EVLKLY   EGTGKA ++VPP +VAGY        
Sbjct: 61  QSRGITLSGSDIRVGNLIGNRGRAHEVLKLYRPLEGTGKATLEVPPQSVAGYATVATTE- 119

Query: 513 DDIKRMERNSALRNQGPKTKREQLLKVTAAVPLLLIYPNAYSLLLANFFVFWHINAGIQE 334
           D  +R ERNS L ++  KTKREQLLK TA   LLLIYPN YSLL ANFFVFWH+ AGI E
Sbjct: 120 DGAERKERNSGL-SKATKTKREQLLKATAVASLLLIYPNTYSLLFANFFVFWHLYAGIGE 178

Query: 333 ILADYVHHEMTREFVFISLRVFLIIAMKDVFLNFVFV 223
           ILADYVHHEMTREFV ISLR+FLIIA+KDV LNFVFV
Sbjct: 179 ILADYVHHEMTREFVMISLRLFLIIALKDVCLNFVFV 215


>ref|NP_001236184.1| uncharacterized protein LOC100500565 [Glycine max]
           gi|255630641|gb|ACU15680.1| unknown [Glycine max]
          Length = 200

 Score =  229 bits (583), Expect = 1e-57
 Identities = 129/199 (64%), Positives = 142/199 (71%), Gaps = 8/199 (4%)
 Frame = -2

Query: 849 MQSISLTLSKRLSKSHPLWRISPNLVAHXXXXXXXXXXXXXPISG--------TAPWSAS 694
           MQS+SLTLSKRLS S PL+RIS NLVAH             P+          TAPWSA+
Sbjct: 1   MQSMSLTLSKRLSNSKPLFRISSNLVAHASSATTSPPPPSPPVPSPSALNSLLTAPWSAT 60

Query: 693 QTRGIRLSGSDVRVGNLIENRGRAYEVLKLYHSHEGTGKAAIKVPPHTVAGYXXXXXXTG 514
           Q+RGI LSGSDVRVGNLI NRGRA+EVLKLY   EGTGKA ++VPP +VAGY        
Sbjct: 61  QSRGITLSGSDVRVGNLIGNRGRAHEVLKLYRPLEGTGKATLEVPPQSVAGYATVATTE- 119

Query: 513 DDIKRMERNSALRNQGPKTKREQLLKVTAAVPLLLIYPNAYSLLLANFFVFWHINAGIQE 334
           D  +R ERNS L ++  KTKREQLLK TA   LLLIYPN YSLL ANFFVFWH+ AGI E
Sbjct: 120 DGAERKERNSGL-SKATKTKREQLLKATAVASLLLIYPNTYSLLFANFFVFWHLYAGIGE 178

Query: 333 ILADYVHHEMTREFVFISL 277
           ILADYVHHEMTREFV ISL
Sbjct: 179 ILADYVHHEMTREFVMISL 197


>ref|XP_003601292.1| Succinate dehydrogenase subunit [Medicago truncatula]
           gi|355490340|gb|AES71543.1| Succinate dehydrogenase
           subunit [Medicago truncatula]
          Length = 177

 Score =  117 bits (292), Expect = 6e-24
 Identities = 80/169 (47%), Positives = 84/169 (49%), Gaps = 52/169 (30%)
 Frame = -2

Query: 849 MQSISLTLSKRLSKS-HPLWRISPNLVAHXXXXXXXXXXXXXPISG-------------- 715
           MQS++L L KRLS S HP WRISPN +AH             PIS               
Sbjct: 1   MQSVALKLGKRLSNSSHPHWRISPNFIAHASTTSSSPSPPSPPISAAENATTTASTLNNL 60

Query: 714 -TAPWSASQTRGIRLSGSDVRVGNLIENRGRAYE-VLKLYHSHEGTGKAAIK-------- 565
            TAPWSASQTRG   SGSDVRVGNLIENRGRAYE VL+ YHS EGTGKAAIK        
Sbjct: 61  LTAPWSASQTRGFTFSGSDVRVGNLIENRGRAYEQVLRRYHSLEGTGKAAIKFQVGMFSC 120

Query: 564 ---------------------------VPPHTVAGYXXXXXXTGDDIKR 499
                                      VPPHTVAGY         DIKR
Sbjct: 121 WCMRINLTAFDKERRISRVNIKCVFGRVPPHTVAGYATAATAGEVDIKR 169


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