BLASTX nr result

ID: Glycyrrhiza23_contig00003495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003495
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   102   4e-20
emb|CAJ30048.1| hypothetical protein mgI390 [Magnetospirillum gr...    51   6e-07
ref|YP_005415552.1| hypothetical protein RSPPHO_03243, partial [...    49   2e-06

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477403|gb|AES58606.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 1106

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/92 (61%), Positives = 57/92 (61%)
 Frame = +2

Query: 5   FRLVRDRFTPRGAYTSRLSKFCSKTSSENLYREGFPAAQQFFHTNLAARRCYWHNNRYTI 184
           FRLVRDRFTPRGAYTSRLSKFCSKTS ENLYREGFP                        
Sbjct: 359 FRLVRDRFTPRGAYTSRLSKFCSKTSFENLYREGFP------------------------ 394

Query: 185 GWPNPVLSY*GWLLAVLPLTPTVDRNRTVSRR 280
                     GWLLAVLPLTPTVDRNRTVSRR
Sbjct: 395 ----------GWLLAVLPLTPTVDRNRTVSRR 416


>emb|CAJ30048.1| hypothetical protein mgI390 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 76

 Score = 50.8 bits (120), Expect(2) = 6e-07
 Identities = 21/30 (70%), Positives = 22/30 (73%)
 Frame = -2

Query: 236 GELRGANPSTRGLGWANLWCTGCYANSSAG 147
           G LRG  PSTRG GW  LWCTGC+AN  AG
Sbjct: 47  GNLRGPVPSTRGPGWTYLWCTGCHANGIAG 76



 Score = 27.3 bits (59), Expect(2) = 6e-07
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -1

Query: 282 ERRETVRFLSTVGV 241
           ERRETVR LSTVGV
Sbjct: 33  ERRETVRSLSTVGV 46


>ref|YP_005415552.1| hypothetical protein RSPPHO_03243, partial [Rhodospirillum
           photometricum DSM 122] gi|384260384|ref|YP_005415570.1|
           hypothetical protein RSPPHO_03261, partial
           [Rhodospirillum photometricum DSM 122]
           gi|378401466|emb|CCG06582.1| Putative uncharacterized
           protein, partial [Rhodospirillum photometricum DSM 122]
           gi|378401484|emb|CCG06600.1| Putative uncharacterized
           protein, partial [Rhodospirillum photometricum DSM 122]
          Length = 109

 Score = 49.3 bits (116), Expect(2) = 2e-06
 Identities = 20/30 (66%), Positives = 22/30 (73%)
 Frame = -2

Query: 236 GELRGANPSTRGLGWANLWCTGCYANSSAG 147
           G LRGA PSTRG GW +LWCT C+A   AG
Sbjct: 80  GNLRGAVPSTRGPGWTSLWCTSCHARGIAG 109



 Score = 27.3 bits (59), Expect(2) = 2e-06
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -1

Query: 282 ERRETVRFLSTVGV 241
           ERRETVR LSTVGV
Sbjct: 66  ERRETVRSLSTVGV 79


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