BLASTX nr result

ID: Glycyrrhiza23_contig00003467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003467
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299345.1| predicted protein [Populus trichocarpa] gi|1...   122   4e-25
gb|ABK96566.1| unknown [Populus trichocarpa x Populus deltoides]      120   1e-24
ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vi...   116   1e-23
gb|AFK49621.1| unknown [Lotus japonicus]                              114   7e-23
gb|AAP23943.1| CCR protein [x Citrofortunella microcarpa]             110   1e-21

>ref|XP_002299345.1| predicted protein [Populus trichocarpa] gi|118489445|gb|ABK96525.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|118489977|gb|ABK96785.1| unknown [Populus trichocarpa
            x Populus deltoides] gi|222846603|gb|EEE84150.1|
            predicted protein [Populus trichocarpa]
          Length = 132

 Score =  122 bits (305), Expect = 4e-25
 Identities = 74/133 (55%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
 Frame = -3

Query: 1482 MQVNSYLATPSSFPSVTLPPPTKSLASPRNHLFLHVPKLDTXXXXXXXXXXXA-HDISTV 1306
            MQ   +L TPS  P VT   P KSLAS R      VP+L T             +D STV
Sbjct: 1    MQAAIFL-TPSILPLVT---PNKSLASARRV----VPRLQTSKCSPIKASAPVTNDTSTV 52

Query: 1305 DYTSNTSVFPAEACEVIGGDACDAEMYPDAKLKPDGRNNIKVTTKELVDREYLDYNNDPK 1126
            DY+S TSVFPAEACE IGG+AC+ EMYP+ KLKPD R+    +T E +DREYL+YN+  K
Sbjct: 53   DYSSFTSVFPAEACETIGGEACNVEMYPEVKLKPDARSTTP-STSEQIDREYLEYNS-AK 110

Query: 1125 TVFLEEACDDLGG 1087
            TVFL+EACDDLGG
Sbjct: 111  TVFLDEACDDLGG 123


>gb|ABK96566.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 132

 Score =  120 bits (301), Expect = 1e-24
 Identities = 73/133 (54%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
 Frame = -3

Query: 1482 MQVNSYLATPSSFPSVTLPPPTKSLASPRNHLFLHVPKLDTXXXXXXXXXXXA-HDISTV 1306
            MQ   +L TPS  P VT   P KSLAS R      VP+L T             +D STV
Sbjct: 1    MQAAIFL-TPSILPLVT---PNKSLASARRV----VPRLQTSKCSPIKASAPVTNDTSTV 52

Query: 1305 DYTSNTSVFPAEACEVIGGDACDAEMYPDAKLKPDGRNNIKVTTKELVDREYLDYNNDPK 1126
            DY+S TSVFPAEACE IGG+AC+ EMYP+ KL+PD R+    +T E +DREYL+YN+  K
Sbjct: 53   DYSSFTSVFPAEACETIGGEACNVEMYPEVKLEPDARSTTP-STSEQIDREYLEYNS-AK 110

Query: 1125 TVFLEEACDDLGG 1087
            TVFL+EACDDLGG
Sbjct: 111  TVFLDEACDDLGG 123


>ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vinifera]
            gi|296088179|emb|CBI35671.3| unnamed protein product
            [Vitis vinifera]
          Length = 139

 Score =  116 bits (291), Expect = 1e-23
 Identities = 73/156 (46%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
 Frame = -3

Query: 1446 FPSVTLP--PPTKSLASPRNHLFLHVPKLDTXXXXXXXXXXXAHDI-STVDYTSNTSVFP 1276
            FP  TLP   PTK  +S +N     + KL T             +  STVDY+S TSVFP
Sbjct: 7    FPRSTLPLLTPTKPFSSLKNP----ISKLQTSPFPPLRATSKLQETPSTVDYSSTTSVFP 62

Query: 1275 AEACEVIGGDACDAEMYPDAKLKPDGRNNIKVTTKELVDREYLDYNNDPKTVFLEEACDD 1096
            AEACEV+GG+ACDAEMYP+ KLK +  N    +  E VDREYL+YN+ PKTVF  EAC  
Sbjct: 63   AEACEVVGGEACDAEMYPEVKLKAEAGNPPARSATEGVDREYLEYNS-PKTVFPGEAC-- 119

Query: 1095 LGGXXXXXXXXXXXXXXXXXXACDDLGGEFCEPEYK 988
                                   DDLGGEFCEPEY+
Sbjct: 120  -----------------------DDLGGEFCEPEYQ 132


>gb|AFK49621.1| unknown [Lotus japonicus]
          Length = 140

 Score =  114 bits (285), Expect = 7e-23
 Identities = 56/79 (70%), Positives = 61/79 (77%)
 Frame = -3

Query: 1323 HDISTVDYTSNTSVFPAEACEVIGGDACDAEMYPDAKLKPDGRNNIKVTTKELVDREYLD 1144
            +D STVDYTS  SVFP EACE IGGDAC AEMYP+ KLKP+ RNN      E V+REYL+
Sbjct: 51   YDTSTVDYTSAFSVFPVEACETIGGDACLAEMYPEVKLKPEARNNTPRDASENVEREYLE 110

Query: 1143 YNNDPKTVFLEEACDDLGG 1087
            Y NDPKTVF  EACDDLGG
Sbjct: 111  Y-NDPKTVFQAEACDDLGG 128


>gb|AAP23943.1| CCR protein [x Citrofortunella microcarpa]
          Length = 140

 Score =  110 bits (275), Expect = 1e-21
 Identities = 53/79 (67%), Positives = 61/79 (77%)
 Frame = -3

Query: 1323 HDISTVDYTSNTSVFPAEACEVIGGDACDAEMYPDAKLKPDGRNNIKVTTKELVDREYLD 1144
            +D ST DY S  SVFPAEACEVIGGDAC AEMYP+AKLKP+ +N+   T  E ++REYL+
Sbjct: 51   NDPSTFDYNSAFSVFPAEACEVIGGDACSAEMYPEAKLKPEAKNDTSTTASEPIEREYLE 110

Query: 1143 YNNDPKTVFLEEACDDLGG 1087
            Y ND  TVF  EACDDLGG
Sbjct: 111  Y-NDTNTVFKGEACDDLGG 128


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