BLASTX nr result

ID: Glycyrrhiza23_contig00003365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003365
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630811.1| Trafficking protein particle complex subunit...   284   2e-74
gb|AFK42150.1| unknown [Medicago truncatula]                          283   4e-74
gb|AFK41770.1| unknown [Lotus japonicus]                              279   6e-73
ref|XP_004144741.1| PREDICTED: trafficking protein particle comp...   277   3e-72
ref|XP_003616027.1| Trafficking protein particle complex subunit...   277   3e-72

>ref|XP_003630811.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355524833|gb|AET05287.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 213

 Score =  284 bits (726), Expect = 2e-74
 Identities = 137/149 (91%), Positives = 143/149 (95%)
 Frame = +3

Query: 282 QILAKAFGMAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP 461
           + L +   MAA+YSLYIINKSGGLIYYKDYGS+GRMDTNDSLRVASLWHSMHAISQQLSP
Sbjct: 65  RFLQRLLVMAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSP 124

Query: 462 VSGCSGIELLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFIYELYTDYVLKNPFY 641
           VSGC+GIELLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKF+YELYTDYVLKNPFY
Sbjct: 125 VSGCTGIELLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFVYELYTDYVLKNPFY 184

Query: 642 EMEMPIRCELFDINLTQAVQKDRVALLGR 728
           EMEMPIRCELFDINL QAVQKDRVALLGR
Sbjct: 185 EMEMPIRCELFDINLAQAVQKDRVALLGR 213


>gb|AFK42150.1| unknown [Medicago truncatula]
          Length = 141

 Score =  283 bits (724), Expect = 4e-74
 Identities = 136/141 (96%), Positives = 140/141 (99%)
 Frame = +3

Query: 306 MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCSGIE 485
           MAA+YSLYIINKSGGLIYYKDYGS+GRMDTNDSLRVASLWHSMHAISQQLSPVSGC+GIE
Sbjct: 1   MAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPVSGCTGIE 60

Query: 486 LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFIYELYTDYVLKNPFYEMEMPIRC 665
           LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKF+YELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120

Query: 666 ELFDINLTQAVQKDRVALLGR 728
           ELFDINL QAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141


>gb|AFK41770.1| unknown [Lotus japonicus]
          Length = 141

 Score =  279 bits (714), Expect = 6e-73
 Identities = 136/141 (96%), Positives = 139/141 (98%)
 Frame = +3

Query: 306 MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCSGIE 485
           MAAIYSLYIINKSGGLIYYKDYGSAGRMDTND+LRVASLWHSMHAISQQLSPVSGC+GIE
Sbjct: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIE 60

Query: 486 LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFIYELYTDYVLKNPFYEMEMPIRC 665
           LLQADTFDLHCFQSLTGTKFFVV EPGTQQMESLLKF+YELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120

Query: 666 ELFDINLTQAVQKDRVALLGR 728
           ELFDINLTQAVQKDRVALL R
Sbjct: 121 ELFDINLTQAVQKDRVALLAR 141


>ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Cucumis sativus] gi|449490796|ref|XP_004158709.1|
           PREDICTED: trafficking protein particle complex subunit
           4-like [Cucumis sativus]
          Length = 141

 Score =  277 bits (708), Expect = 3e-72
 Identities = 132/141 (93%), Positives = 139/141 (98%)
 Frame = +3

Query: 306 MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCSGIE 485
           MAAIYSLYIINKSGGLI+YKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP++GCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 486 LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFIYELYTDYVLKNPFYEMEMPIRC 665
           LL+ADTFDLHCFQSLTGTKFFVVCEPGTQ MESLLK+IYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 666 ELFDINLTQAVQKDRVALLGR 728
           ELFDINL QAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141


>ref|XP_003616027.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355517362|gb|AES98985.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 141

 Score =  277 bits (708), Expect = 3e-72
 Identities = 132/141 (93%), Positives = 140/141 (99%)
 Frame = +3

Query: 306 MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCSGIE 485
           MAAIYSLYIINKSGGLIYYKDYGSAGRMDTND+LRVASLWHSMHAISQQLSPVSGCSGIE
Sbjct: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCSGIE 60

Query: 486 LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFIYELYTDYVLKNPFYEMEMPIRC 665
           LLQADTFDLHCFQSLTGTKFF VCEPGTQQ+ESLLK++YELYTDYVLKNPFYE+EMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFAVCEPGTQQIESLLKYVYELYTDYVLKNPFYEIEMPIRC 120

Query: 666 ELFDINLTQAVQKDRVALLGR 728
           ELFD+NLTQ+VQKDRVALLG+
Sbjct: 121 ELFDMNLTQSVQKDRVALLGQ 141


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