BLASTX nr result

ID: Glycyrrhiza23_contig00003300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003300
         (2287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   504   e-140
ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   499   e-138
ref|XP_002533876.1| zinc finger protein, putative [Ricinus commu...   424   e-116
ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   419   e-114
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114

>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 469

 Score =  504 bits (1297), Expect = e-140
 Identities = 249/285 (87%), Positives = 259/285 (90%)
 Frame = +2

Query: 326  MGTSNLRLFFFSLASLCAMAAAKVVLIGNNITLSFDDIEANFAPSVKGSGEYGVLFLAEP 505
            MGTSNL L FFSL SLCAMAA+KVVLIGNNITLSFDDIEANFAP+VKGSGEYG+L+LAEP
Sbjct: 1    MGTSNL-LLFFSLVSLCAMAASKVVLIGNNITLSFDDIEANFAPTVKGSGEYGILYLAEP 59

Query: 506  LDACTELTNKAEQLPNASSPFVLIIRGGCSFEEKVRRAQNAGYKAAIVYDNEDGGILVAM 685
            LDACTELTNK EQLPNASSPF L++RGGCSFEEKVRRAQ AG+KA IVYDNEDGGILVAM
Sbjct: 60   LDACTELTNKVEQLPNASSPFALVVRGGCSFEEKVRRAQKAGFKAVIVYDNEDGGILVAM 119

Query: 686  AGNSAGIRIHAVFVSKASGELLKKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSAV 865
            AGNSAGI+IHAVFVSKASGE+L KY GLTNVE WLIPTFENSAWSIMAISFISLLAMSAV
Sbjct: 120  AGNSAGIKIHAVFVSKASGEILSKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179

Query: 866  LATCFFVXXXXXXXXXXXXXXXXEFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLED 1045
            LATCFFV                EFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLED
Sbjct: 180  LATCFFVRRHRIRRERPRAPLVREFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLED 239

Query: 1046 YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLTD 1180
            YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDAR+GLTD
Sbjct: 240  YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARSGLTD 284



 Score =  112 bits (280), Expect = 4e-22
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +3

Query: 1470 NASQRSLASHMNSPHSMGYPSMSSLNSRYFSSHIPSPSNASVSYIGSSSHQQHPLRYXXX 1649
            NASQRSLASH+NSP SMGYPS+SSLNSRY S HIPSPSNASVSY+GSSSHQQHPLRY   
Sbjct: 394  NASQRSLASHLNSPRSMGYPSLSSLNSRYMSPHIPSPSNASVSYMGSSSHQQHPLRYSES 453

Query: 1650 XXXXXXXXXXXXLPEC 1697
                        LPEC
Sbjct: 454  AASFSPFASTHSLPEC 469


>ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 495

 Score =  499 bits (1284), Expect = e-138
 Identities = 247/285 (86%), Positives = 258/285 (90%)
 Frame = +2

Query: 326  MGTSNLRLFFFSLASLCAMAAAKVVLIGNNITLSFDDIEANFAPSVKGSGEYGVLFLAEP 505
            MGTSNL L FFSL SLCAMAA+KVVLIGNNITLSFDDIEANFAP+VKGSG+YGVL+LAEP
Sbjct: 1    MGTSNL-LLFFSLMSLCAMAASKVVLIGNNITLSFDDIEANFAPAVKGSGKYGVLYLAEP 59

Query: 506  LDACTELTNKAEQLPNASSPFVLIIRGGCSFEEKVRRAQNAGYKAAIVYDNEDGGILVAM 685
            LDAC ELTNK EQLPNASSPF L++RGGCSFEEKVR AQ AG+KA IVYDNE+GGILVAM
Sbjct: 60   LDACAELTNKVEQLPNASSPFALVVRGGCSFEEKVRIAQKAGFKAVIVYDNEEGGILVAM 119

Query: 686  AGNSAGIRIHAVFVSKASGELLKKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSAV 865
            AGNSAGIRIHAVFVSKASGE+LKKY GLTNVE WLIPTFENSAWSIMAISFISLLAMSAV
Sbjct: 120  AGNSAGIRIHAVFVSKASGEILKKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179

Query: 866  LATCFFVXXXXXXXXXXXXXXXXEFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLED 1045
            LATCFFV                EFHGMSSRLVKAMPSL+FT+VLEDNCTSRTCAICLED
Sbjct: 180  LATCFFVRKHRIRRERPRASLVREFHGMSSRLVKAMPSLVFTSVLEDNCTSRTCAICLED 239

Query: 1046 YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLTD 1180
            YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLTD
Sbjct: 240  YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLTD 284



 Score =  111 bits (277), Expect = 1e-21
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +3

Query: 1470 NASQRSLASHMNSPHSMGYPSMSSLNSRYFSSHIPSPSNASVSYIGSSSHQQHPLRYXXX 1649
            NASQRSLASH+NSP SMGYPS+SSLNSRY S HIPSPSNASVSY+GSSSHQQHPLRY   
Sbjct: 420  NASQRSLASHLNSPCSMGYPSLSSLNSRYMSPHIPSPSNASVSYMGSSSHQQHPLRYSES 479

Query: 1650 XXXXXXXXXXXXLPEC 1697
                        LPEC
Sbjct: 480  AASFSPFASTHSLPEC 495


>ref|XP_002533876.1| zinc finger protein, putative [Ricinus communis]
            gi|223526177|gb|EEF28507.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 434

 Score =  424 bits (1091), Expect = e-116
 Identities = 209/283 (73%), Positives = 235/283 (83%), Gaps = 1/283 (0%)
 Frame = +2

Query: 335  SNLRLFFFSLASLCAMAAAKVVLIGNNITLSFDDIEANFAPSVKGSGEYGVLFLAEPLDA 514
            S + +  F L++ C+M  A VVLIG N+TLSFDD+EA FAP+VK SGE G L+LAEP+DA
Sbjct: 6    SGVVILLFYLSACCSMTLANVVLIGRNVTLSFDDVEATFAPAVKSSGECGQLYLAEPVDA 65

Query: 515  CTELTNKA-EQLPNASSPFVLIIRGGCSFEEKVRRAQNAGYKAAIVYDNEDGGILVAMAG 691
            C+ELTNK  +   N +SPFVL+IRGGCSFE+KVRRAQ AG+KAAIVYDNED G+LV+MAG
Sbjct: 66   CSELTNKVVKPTSNVTSPFVLVIRGGCSFEDKVRRAQRAGFKAAIVYDNEDDGVLVSMAG 125

Query: 692  NSAGIRIHAVFVSKASGELLKKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSAVLA 871
            NSAGI+IHAVF+SK+SGE LKKY GL+ +E WLIP+FENSAWSIMAISFISLLAMSAVLA
Sbjct: 126  NSAGIKIHAVFISKSSGETLKKYVGLSEMELWLIPSFENSAWSIMAISFISLLAMSAVLA 185

Query: 872  TCFFVXXXXXXXXXXXXXXXXEFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLEDYC 1051
            TCFFV                EFHGMSSRLVKAMPSLIFTAV+EDNCTS+TCAICLEDY 
Sbjct: 186  TCFFVRRHRIRRGRPRSSRVREFHGMSSRLVKAMPSLIFTAVVEDNCTSQTCAICLEDYS 245

Query: 1052 VGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLTD 1180
            VGEKLRILPC HKFHA CVDSWLTSWRTFCPVCKRDART   D
Sbjct: 246  VGEKLRILPCRHKFHALCVDSWLTSWRTFCPVCKRDARTSTGD 288


>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score =  419 bits (1076), Expect = e-114
 Identities = 211/286 (73%), Positives = 233/286 (81%), Gaps = 1/286 (0%)
 Frame = +2

Query: 326  MGTSNLRLFFFSLASLCAMAA-AKVVLIGNNITLSFDDIEANFAPSVKGSGEYGVLFLAE 502
            M + NL L F +  +L A  A A VVLIGNN+TLSFDDI+ANFA  VKGSGE G+L++AE
Sbjct: 1    MRSMNLVLLFCAFLNLMASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAE 60

Query: 503  PLDACTELTNKAEQLPNASSPFVLIIRGGCSFEEKVRRAQNAGYKAAIVYDNEDGGILVA 682
            PLDAC+ LTN  E++  ASSPFVLI+RGGC FE+KVR AQ AG+ AAIVYDNEDGG+LVA
Sbjct: 61   PLDACSPLTNAVEKVEGASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVA 120

Query: 683  MAGNSAGIRIHAVFVSKASGELLKKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSA 862
            MAGNSAGI+IHAVFVSKASG +L+ Y G  ++E W+IP+FENSAWSIMAISFISLLAMSA
Sbjct: 121  MAGNSAGIKIHAVFVSKASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSA 180

Query: 863  VLATCFFVXXXXXXXXXXXXXXXXEFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLE 1042
            VLATCFFV                EFHGMSSRLVKAMPSLIFT VLEDNCTSRTCAICLE
Sbjct: 181  VLATCFFVRRHRIRRQRPRVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLE 240

Query: 1043 DYCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLTD 1180
            DY VGEKLRILPC HKFHA CVDSWLTSWRTFCPVCKRDART   D
Sbjct: 241  DYNVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGD 286



 Score = 89.4 bits (220), Expect = 4e-15
 Identities = 44/75 (58%), Positives = 51/75 (68%)
 Frame = +3

Query: 1473 ASQRSLASHMNSPHSMGYPSMSSLNSRYFSSHIPSPSNASVSYIGSSSHQQHPLRYXXXX 1652
            +SQRS AS++ SPHSMGYPS+S LNSRY S +IPSPSNAS+SY+GSSS   HPL Y    
Sbjct: 372  SSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSSRPPHPLHYSESA 431

Query: 1653 XXXXXXXXXXXLPEC 1697
                       LPEC
Sbjct: 432  TSFSPYTSAQSLPEC 446


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  417 bits (1073), Expect = e-114
 Identities = 206/274 (75%), Positives = 231/274 (84%)
 Frame = +2

Query: 347  LFFFSLASLCAMAAAKVVLIGNNITLSFDDIEANFAPSVKGSGEYGVLFLAEPLDACTEL 526
            +   SL S C +A+  V+LIGNN+T++FDDIEANFAP++KGSGE GVL+LAEP+DAC++L
Sbjct: 6    VLLLSLLSCCLVASGNVLLIGNNVTMAFDDIEANFAPAIKGSGECGVLYLAEPIDACSDL 65

Query: 527  TNKAEQLPNASSPFVLIIRGGCSFEEKVRRAQNAGYKAAIVYDNEDGGILVAMAGNSAGI 706
            TN+AE+  N SSPFVLIIR GCSFE+KVRRAQ AGYKAAI+YDNE+ GILVAMAGNSAG+
Sbjct: 66   TNQAEKGSNCSSPFVLIIREGCSFEDKVRRAQKAGYKAAIIYDNEE-GILVAMAGNSAGV 124

Query: 707  RIHAVFVSKASGELLKKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSAVLATCFFV 886
             I AVFVSK SGE LKKY GLT++E W+IP+FENSAWSIMAISFISLLAMSAVLATCFFV
Sbjct: 125  TIPAVFVSKTSGETLKKYAGLTDLELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 184

Query: 887  XXXXXXXXXXXXXXXXEFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLEDYCVGEKL 1066
                            EFHGMSSRLVKAMPSL FT+ LEDNCTS TCAICLEDY VGEKL
Sbjct: 185  RRHRIRRERPRSSRVREFHGMSSRLVKAMPSLTFTSALEDNCTSTTCAICLEDYTVGEKL 244

Query: 1067 RILPCCHKFHAACVDSWLTSWRTFCPVCKRDART 1168
            RILPC HKFHA CVDSWLT+WRTFCPVCKRDART
Sbjct: 245  RILPCRHKFHAFCVDSWLTTWRTFCPVCKRDART 278



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 37/75 (49%), Positives = 46/75 (61%)
 Frame = +3

Query: 1473 ASQRSLASHMNSPHSMGYPSMSSLNSRYFSSHIPSPSNASVSYIGSSSHQQHPLRYXXXX 1652
            +S RS AS + SPHS+GYPS+S LN+RY S++IPSPSNAS S + SSS Q  PL      
Sbjct: 364  SSLRSRASFLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLV-SSSRQPRPLHCSESA 422

Query: 1653 XXXXXXXXXXXLPEC 1697
                       LP+C
Sbjct: 423  ASFSPFASAHSLPDC 437


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