BLASTX nr result

ID: Glycyrrhiza23_contig00003299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003299
         (1739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium h...   718   0.0  
ref|XP_003519292.1| PREDICTED: pyruvate dehydrogenase E1 compone...   713   0.0  
gb|AAY86036.1| pyruvate dehydrogenase, partial [Citrus x paradisi]    707   0.0  
ref|XP_003551999.1| PREDICTED: pyruvate dehydrogenase E1 compone...   706   0.0  
ref|XP_002314631.1| predicted protein [Populus trichocarpa] gi|2...   703   0.0  

>gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium hirsutum]
          Length = 394

 Score =  718 bits (1853), Expect = 0.0
 Identities = 349/395 (88%), Positives = 376/395 (95%)
 Frame = -2

Query: 1585 MALSRLASSSGVVGSNLLKPISAAISLRRPISTDNSPLTVETSVPFTSHNCDPPSRAVDT 1406
            MALS LA+S+    S+LLKP+S+A+SLRRPIS DNSPLTVETSVPFTSH C+ PSR+V+T
Sbjct: 1    MALSHLAASASR-SSSLLKPLSSALSLRRPISGDNSPLTVETSVPFTSHQCEAPSRSVET 59

Query: 1405 TSSELFSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKRDCIIT 1226
               EL +FFR MALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GMEAAITK+DCIIT
Sbjct: 60   NPKELLTFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIIT 119

Query: 1225 AYRDHCTFLGRGGTLHEVFSELMGRKDGCSKGKGGSMHFYKKESGFYGGHGIVGAQIPLG 1046
            AYRDHCTF+ RGGTL EVF+ELMGR+ GCSKGKGGSMHFYKK+S FYGGHGIVGAQ+PLG
Sbjct: 120  AYRDHCTFVSRGGTLLEVFAELMGRQAGCSKGKGGSMHFYKKDSNFYGGHGIVGAQVPLG 179

Query: 1045 CGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEW 866
            CGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNI+ALWDLPAILVCENNHYGMGTAEW
Sbjct: 180  CGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEW 239

Query: 865  RAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMS 686
            RAAKSPAYYKRGDYVPGLKVDGMD LAVKQACKFAKEHALKNGP+ILEMDTYRYHGHSMS
Sbjct: 240  RAAKSPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMS 299

Query: 685  DPGSTYRTRDEISGVRQERDPVERIRKLLLTHEIATEKELKDIEKEVRKEVDEAIAKAKE 506
            DPGSTYRTRDEISGVRQERDP+ERIRKL+L+H++ATEKELKD+EKEVRKEVD+AIA+AKE
Sbjct: 300  DPGSTYRTRDEISGVRQERDPIERIRKLILSHDLATEKELKDVEKEVRKEVDDAIAQAKE 359

Query: 505  SPMPEPSELFTNVYAKGYGVESFGADRKEVRATLP 401
            SPMPEPSELFTNVYAKG GVESFGADRKEVRATLP
Sbjct: 360  SPMPEPSELFTNVYAKGLGVESFGADRKEVRATLP 394


>ref|XP_003519292.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1,
            mitochondrial-like [Glycine max]
          Length = 396

 Score =  713 bits (1841), Expect = 0.0
 Identities = 350/398 (87%), Positives = 375/398 (94%), Gaps = 3/398 (0%)
 Frame = -2

Query: 1585 MALSRLASSSGVVGSNLLKPISAAISLR---RPISTDNSPLTVETSVPFTSHNCDPPSRA 1415
            MALSRL+  S  +GS L KP SAA +     R IST ++PLT+ETSVPFT+HNCDPPSRA
Sbjct: 1    MALSRLSHRS--IGSTLTKPFSAAAASAASSRSISTSDTPLTIETSVPFTAHNCDPPSRA 58

Query: 1414 VDTTSSELFSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKRDC 1235
            V T+SSEL +FFR MALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GMEAAITK+D 
Sbjct: 59   VATSSSELLTFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDS 118

Query: 1234 IITAYRDHCTFLGRGGTLHEVFSELMGRKDGCSKGKGGSMHFYKKESGFYGGHGIVGAQI 1055
            IITAYRDHC F+GRGGTL EVF+ELMGRK+GCSKGKGGSMHFYKKESGFYGGHGIVGAQ+
Sbjct: 119  IITAYRDHCIFVGRGGTLLEVFAELMGRKEGCSKGKGGSMHFYKKESGFYGGHGIVGAQV 178

Query: 1054 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT 875
            PLGCGLAFAQKYSKDE+VTFA+YGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT
Sbjct: 179  PLGCGLAFAQKYSKDESVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT 238

Query: 874  AEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGH 695
            AEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGH
Sbjct: 239  AEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGH 298

Query: 694  SMSDPGSTYRTRDEISGVRQERDPVERIRKLLLTHEIATEKELKDIEKEVRKEVDEAIAK 515
            SMSDPGSTYRTRDEISGVRQERDP+ER+RKL+L+H+IA EKELKDIEKEVRKEVDEAIAK
Sbjct: 299  SMSDPGSTYRTRDEISGVRQERDPIERVRKLVLSHDIAAEKELKDIEKEVRKEVDEAIAK 358

Query: 514  AKESPMPEPSELFTNVYAKGYGVESFGADRKEVRATLP 401
            AKESPMP+PS+LFTNVY KGYGVE+FGADRKEVRATLP
Sbjct: 359  AKESPMPDPSDLFTNVYVKGYGVETFGADRKEVRATLP 396


>gb|AAY86036.1| pyruvate dehydrogenase, partial [Citrus x paradisi]
          Length = 395

 Score =  707 bits (1826), Expect = 0.0
 Identities = 344/392 (87%), Positives = 367/392 (93%)
 Frame = -2

Query: 1576 SRLASSSGVVGSNLLKPISAAISLRRPISTDNSPLTVETSVPFTSHNCDPPSRAVDTTSS 1397
            S+L+SSS +  +N+LKP++ +  L RPISTD +PLT+ETSVPFTSH C+ PSR+V+TT  
Sbjct: 5    SKLSSSSSL-STNILKPLTNSFFLHRPISTDTTPLTIETSVPFTSHQCEAPSRSVETTPK 63

Query: 1396 ELFSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKRDCIITAYR 1217
            EL SFFRQMA MRRMEIAADSLYKAKL+RGFCHLYDGQEAVAIGMEA ITK+D IITAYR
Sbjct: 64   ELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYR 123

Query: 1216 DHCTFLGRGGTLHEVFSELMGRKDGCSKGKGGSMHFYKKESGFYGGHGIVGAQIPLGCGL 1037
            DHCTFLGRGGTL EVFSELMGRKDGCS GKGGSMHFYKK+S  YGGHGIVGAQIPLGCGL
Sbjct: 124  DHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSRLYGGHGIVGAQIPLGCGL 183

Query: 1036 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAA 857
            AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAA
Sbjct: 184  AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAA 243

Query: 856  KSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPG 677
            KSP+YYKRGDYVPGLKVDGMD LAVKQACKFAKEHALKNGP+ILEMDTYRYHGHSMSDPG
Sbjct: 244  KSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPG 303

Query: 676  STYRTRDEISGVRQERDPVERIRKLLLTHEIATEKELKDIEKEVRKEVDEAIAKAKESPM 497
            STYRTRDEISGVRQERDP+ERIRKL+L H++ATEKELKDIEKEVRKEVDEAIAKAKESPM
Sbjct: 304  STYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDEAIAKAKESPM 363

Query: 496  PEPSELFTNVYAKGYGVESFGADRKEVRATLP 401
            PEPSELFTNVY KGYGVE FGADRKEVR+ LP
Sbjct: 364  PEPSELFTNVYVKGYGVEVFGADRKEVRSVLP 395


>ref|XP_003551999.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha,
            mitochondrial-like [Glycine max]
          Length = 395

 Score =  706 bits (1821), Expect = 0.0
 Identities = 344/396 (86%), Positives = 373/396 (94%), Gaps = 1/396 (0%)
 Frame = -2

Query: 1585 MALSRLASSSGVVGSNLLKPISAAISLRR-PISTDNSPLTVETSVPFTSHNCDPPSRAVD 1409
            MALSR+A SS    SNLLKP+S+ +SLRR  +ST + PLTVETSVPFTSHNCD P RAV+
Sbjct: 1    MALSRVAQSSPSQ-SNLLKPLSSYLSLRRRSVSTSSEPLTVETSVPFTSHNCDAPPRAVE 59

Query: 1408 TTSSELFSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKRDCII 1229
            T+S+ELFSFFR MALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GMEAAIT++DCII
Sbjct: 60   TSSAELFSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRKDCII 119

Query: 1228 TAYRDHCTFLGRGGTLHEVFSELMGRKDGCSKGKGGSMHFYKKESGFYGGHGIVGAQIPL 1049
            TAYRDHCTFL RGGTL EVF+ELMGR+DGCSKGKGGSMHFY+KE GFYGGHGIVGAQ+PL
Sbjct: 120  TAYRDHCTFLARGGTLIEVFAELMGRRDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPL 179

Query: 1048 GCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAE 869
            GCGLAFAQKY KDE VTF++YGDGAANQGQLFEALNI+ALWDLP+ILVCENNHYGMGTAE
Sbjct: 180  GCGLAFAQKYCKDENVTFSMYGDGAANQGQLFEALNISALWDLPSILVCENNHYGMGTAE 239

Query: 868  WRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSM 689
            WRAAKSP+YYKRGDYVPGLKVDGMD LAVKQACKFAKE ALKNGP+ILEMDTYRYHGHSM
Sbjct: 240  WRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEFALKNGPIILEMDTYRYHGHSM 299

Query: 688  SDPGSTYRTRDEISGVRQERDPVERIRKLLLTHEIATEKELKDIEKEVRKEVDEAIAKAK 509
            SDPGSTYRTRDEISGVRQERDP+ER+RKLLLTHEIATEKELKDIEKE+RKEVDEAIAKAK
Sbjct: 300  SDPGSTYRTRDEISGVRQERDPIERVRKLLLTHEIATEKELKDIEKEIRKEVDEAIAKAK 359

Query: 508  ESPMPEPSELFTNVYAKGYGVESFGADRKEVRATLP 401
            ES MPEPS+LFTNVY KG+GVE+ GADRKE+RATLP
Sbjct: 360  ESQMPEPSDLFTNVYVKGFGVEACGADRKELRATLP 395


>ref|XP_002314631.1| predicted protein [Populus trichocarpa] gi|222863671|gb|EEF00802.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  703 bits (1814), Expect = 0.0
 Identities = 339/395 (85%), Positives = 364/395 (92%)
 Frame = -2

Query: 1585 MALSRLASSSGVVGSNLLKPISAAISLRRPISTDNSPLTVETSVPFTSHNCDPPSRAVDT 1406
            MALS L SSS   GSN LKP++ A SLRRPIST   PLT+ETS+PFT+H CDPPSR VDT
Sbjct: 1    MALSHLKSSSS--GSNFLKPLATAFSLRRPISTSTDPLTIETSIPFTTHRCDPPSRTVDT 58

Query: 1405 TSSELFSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKRDCIIT 1226
            +  EL SFFR MA MRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GMEAAITK+D IIT
Sbjct: 59   SPQELLSFFRDMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDSIIT 118

Query: 1225 AYRDHCTFLGRGGTLHEVFSELMGRKDGCSKGKGGSMHFYKKESGFYGGHGIVGAQIPLG 1046
            AYRDHCTFLGRGGTL E+FSELMGR+ GCS GKGGSMHFYKK SGFYGGHGIVGAQ+PLG
Sbjct: 119  AYRDHCTFLGRGGTLLEIFSELMGRQGGCSSGKGGSMHFYKKNSGFYGGHGIVGAQVPLG 178

Query: 1045 CGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEW 866
            CGLAFA KY+KD+ V FALYGDGAANQGQLFEALNI+ALWDLP ILVCENNHYGMGTAEW
Sbjct: 179  CGLAFAHKYNKDDAVAFALYGDGAANQGQLFEALNISALWDLPIILVCENNHYGMGTAEW 238

Query: 865  RAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMS 686
            RAAKSPAYYKRGDYVPGLKVDGMD  AVKQACKFAKEHALK+GP+ILEMDTYRYHGHSMS
Sbjct: 239  RAAKSPAYYKRGDYVPGLKVDGMDAFAVKQACKFAKEHALKSGPIILEMDTYRYHGHSMS 298

Query: 685  DPGSTYRTRDEISGVRQERDPVERIRKLLLTHEIATEKELKDIEKEVRKEVDEAIAKAKE 506
            DPGSTYRTRDEISGVRQERDP+ERIRKL++TH++ATEKELKDIEKEVRK+VDEAIA+AKE
Sbjct: 299  DPGSTYRTRDEISGVRQERDPIERIRKLIVTHDLATEKELKDIEKEVRKQVDEAIAQAKE 358

Query: 505  SPMPEPSELFTNVYAKGYGVESFGADRKEVRATLP 401
            SPMPEPSELFTNVYAKG GVE++GADRKEVRA LP
Sbjct: 359  SPMPEPSELFTNVYAKGMGVEAYGADRKEVRAVLP 393


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