BLASTX nr result

ID: Glycyrrhiza23_contig00003275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003275
         (1813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550474.1| PREDICTED: U-box domain-containing protein 4...   299   2e-78
ref|XP_003529668.1| PREDICTED: U-box domain-containing protein 2...   298   2e-78
ref|XP_003635632.1| PREDICTED: U-box domain-containing protein 4...   293   1e-76
ref|XP_003546191.1| PREDICTED: U-box domain-containing protein 4...   285   3e-74
ref|XP_002528228.1| ubiquitin-protein ligase, putative [Ricinus ...   284   6e-74

>ref|XP_003550474.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 425

 Score =  299 bits (765), Expect = 2e-78
 Identities = 172/281 (61%), Positives = 199/281 (70%), Gaps = 5/281 (1%)
 Frame = +3

Query: 63  MVSAEKDSSESNSNGLTQTPHKDSTTSKPQTSGRSMRTVRSNLFQDNHHAHAQACSQSFT 242
           MVSAEKDS+E++   +                G+SMRTVRS +FQ +H            
Sbjct: 1   MVSAEKDSNETHRTII----------------GKSMRTVRSKIFQHDH------------ 32

Query: 243 STCVSDNLNDSLIDLASRNNHNHKSVKVEEEQLLELSQAFSDFSACSSDISGELQRLATL 422
           +TCVSDNL  SL++LASRNN + KS  + EEQLLELSQA SDFSACSSDISGELQRLAT+
Sbjct: 33  ATCVSDNLTGSLMELASRNNKSVKS-SITEEQLLELSQALSDFSACSSDISGELQRLATV 91

Query: 423 SSSENDAVPADVDNEP--EPEPSLGFLQR---ATEVIDSISPEDLQPTVKICVDALRSPS 587
           SSS+  A  AD+  +P  EPEP LGFLQR   +TE+I+SISPEDLQPTVKICVD L SPS
Sbjct: 92  SSSQPPAAAADIHGQPQPEPEPCLGFLQRESFSTEIIESISPEDLQPTVKICVDGLLSPS 151

Query: 588 VSVXXXXXXXXXXXXXXXXXXXXXIGESGAIPALVPLLRCSDPWTQEHAVTALLNLSLLE 767
           ++V                     IGESGA+ ALVPLLRCSDPWTQEHAVTALLNLSLLE
Sbjct: 152 LAVKRSAAAKLRLLAKNRADNRALIGESGAVAALVPLLRCSDPWTQEHAVTALLNLSLLE 211

Query: 768 DNKKAITNEGAVKSLVYALKTGTETSKQNAACALLNLAMVE 890
           +NK  ITN GAVKSL+Y LK GTETSKQNAACAL++LA+VE
Sbjct: 212 ENKALITNAGAVKSLIYVLKRGTETSKQNAACALMSLALVE 252



 Score =  220 bits (561), Expect = 8e-55
 Identities = 115/139 (82%), Positives = 125/139 (89%)
 Frame = +2

Query: 1028 GSNRGKKDALTTLYKLCSVKQNKERAVSAGAVKPLVEMVAEQGSGMAEKAMVVLNSLAGI 1207
            GS RGKKDALTTLYKLCSV+QNKERAVSAGAV+PLVE+VAEQGSGMAEKAMVVLNSLAGI
Sbjct: 274  GSQRGKKDALTTLYKLCSVRQNKERAVSAGAVRPLVELVAEQGSGMAEKAMVVLNSLAGI 333

Query: 1208 REGRVAIVDEGGMVALVEAIEDGSVKGKEFAVLTLVQLCGDSVRNRGLLVMEGGIPPLVA 1387
             EG+ AIV+EGG+ ALVEAIE GSVKGKEFAVLTL QLC ++V NR LLV EGGIPPLVA
Sbjct: 334  EEGKEAIVEEGGIAALVEAIEVGSVKGKEFAVLTLYQLCAETVTNRALLVREGGIPPLVA 393

Query: 1388 LSQTGTLRVKHKAETLLGY 1444
            LSQ+  +R K KAETLLGY
Sbjct: 394  LSQSSPVRAKLKAETLLGY 412


>ref|XP_003529668.1| PREDICTED: U-box domain-containing protein 2-like [Glycine max]
          Length = 428

 Score =  298 bits (764), Expect = 2e-78
 Identities = 173/281 (61%), Positives = 197/281 (70%), Gaps = 5/281 (1%)
 Frame = +3

Query: 63  MVSAEKDSSESNSNGLTQTPHKDSTTSKPQTSGRSMRTVRSNLFQDNHHAHAQACSQSFT 242
           MVSAEKDS+E+             T + P   G+SMRTVRS LFQ +  A          
Sbjct: 1   MVSAEKDSNET-------------TNTHPTIIGKSMRTVRSKLFQHDRAA---------- 37

Query: 243 STCVSDNLNDSLIDLASRNNHNHKSVKVEEEQLLELSQAFSDFSACSSDISGELQRLATL 422
             CVSDNL  SL++LASRNN + KS  + EEQLLELSQA SDFSACSSDISGELQRLAT+
Sbjct: 38  --CVSDNLTGSLMELASRNNKSVKS-SITEEQLLELSQALSDFSACSSDISGELQRLATV 94

Query: 423 SSSENDAVPADVDNEPEPE--PSLGFLQR---ATEVIDSISPEDLQPTVKICVDALRSPS 587
           SSS+       VD +P+PE  P LGFLQR   +TE+I+SISPEDLQPTVKICVD L SPS
Sbjct: 95  SSSQPPPAAPHVDGQPQPEHEPCLGFLQRESFSTEIIESISPEDLQPTVKICVDGLHSPS 154

Query: 588 VSVXXXXXXXXXXXXXXXXXXXXXIGESGAIPALVPLLRCSDPWTQEHAVTALLNLSLLE 767
           V+V                     IGESGA+ ALVPLLRCSDPWTQEHAVTALLNLSLLE
Sbjct: 155 VAVKRSAAAKLRLLAKNRADNRALIGESGAVAALVPLLRCSDPWTQEHAVTALLNLSLLE 214

Query: 768 DNKKAITNEGAVKSLVYALKTGTETSKQNAACALLNLAMVE 890
           +NK  ITN GAVK+L+Y LKTGTETSKQNAACAL++LA+VE
Sbjct: 215 ENKALITNAGAVKALIYVLKTGTETSKQNAACALMSLALVE 255



 Score =  223 bits (567), Expect = 2e-55
 Identities = 116/139 (83%), Positives = 126/139 (90%)
 Frame = +2

Query: 1028 GSNRGKKDALTTLYKLCSVKQNKERAVSAGAVKPLVEMVAEQGSGMAEKAMVVLNSLAGI 1207
            GS RGKKDALTTLYKLCSV+QNKERAVSAGAV+PLVE+VAE+GSGMAEKAMVVLNSLAGI
Sbjct: 277  GSQRGKKDALTTLYKLCSVRQNKERAVSAGAVRPLVELVAEEGSGMAEKAMVVLNSLAGI 336

Query: 1208 REGRVAIVDEGGMVALVEAIEDGSVKGKEFAVLTLVQLCGDSVRNRGLLVMEGGIPPLVA 1387
             EG+ AIV+EGG+ AL+EAIEDGSVKGKEFAVLTLVQLC  SV NR LLV EGGIPPLVA
Sbjct: 337  EEGKEAIVEEGGIGALLEAIEDGSVKGKEFAVLTLVQLCAHSVANRALLVREGGIPPLVA 396

Query: 1388 LSQTGTLRVKHKAETLLGY 1444
            LSQ  ++R K KAETLLGY
Sbjct: 397  LSQNASVRAKLKAETLLGY 415


>ref|XP_003635632.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
           gi|147866196|emb|CAN79837.1| hypothetical protein
           VITISV_007520 [Vitis vinifera]
          Length = 452

 Score =  293 bits (749), Expect = 1e-76
 Identities = 166/287 (57%), Positives = 209/287 (72%), Gaps = 11/287 (3%)
 Frame = +3

Query: 63  MVSAEKDSSESNSNGLTQTPHKDSTTSK---PQTSGRSMRTVRSNLFQDNHHAHAQACSQ 233
           MVS E+  S SN    ++T +  S+TS     ++ GRSMRT+RSNL+Q +     ++CS 
Sbjct: 1   MVSLEESHSNSNVLASSRTLYNTSSTSSIKIQRSLGRSMRTIRSNLYQTD-----RSCSF 55

Query: 234 SFTSTCVSDNLNDSLID-----LASRNNHNHKSVKVEEEQLLELSQAFSDFSACSSDISG 398
           +  S+CVS+NL DS+ID     LASR+N + +S   ++E+ L+LS AFSDFSACSSDISG
Sbjct: 56  ADKSSCVSENLTDSVIDMRLGELASRSNKSAQSPS-QDEEYLDLSHAFSDFSACSSDISG 114

Query: 399 ELQRLATLSSSENDAVPADVDNEPEPEPSLGFLQR---ATEVIDSISPEDLQPTVKICVD 569
           ELQRLA+L  SE+  V  +  ++PEPEP LGFLQR   +TE+I+SISPEDLQPTVK+CVD
Sbjct: 115 ELQRLASLPPSED--VAKNESSDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKMCVD 172

Query: 570 ALRSPSVSVXXXXXXXXXXXXXXXXXXXXXIGESGAIPALVPLLRCSDPWTQEHAVTALL 749
            L+SPSV+V                     IGESGA+PAL+PLLRC+DPWTQEHAVTALL
Sbjct: 173 GLQSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVPALIPLLRCTDPWTQEHAVTALL 232

Query: 750 NLSLLEDNKKAITNEGAVKSLVYALKTGTETSKQNAACALLNLAMVE 890
           NLSL E+NK  ITN GA+KSLVY LKTGTETSKQNAACALLNL++++
Sbjct: 233 NLSLHEENKTLITNAGAIKSLVYVLKTGTETSKQNAACALLNLSLID 279



 Score =  232 bits (591), Expect = 3e-58
 Identities = 120/139 (86%), Positives = 129/139 (92%)
 Frame = +2

Query: 1028 GSNRGKKDALTTLYKLCSVKQNKERAVSAGAVKPLVEMVAEQGSGMAEKAMVVLNSLAGI 1207
            GSNRGKKDALTTLYKLCS+KQNKERAVSAGAVK LVE+VAEQG+G+AEKAMV+L+SLA I
Sbjct: 301  GSNRGKKDALTTLYKLCSMKQNKERAVSAGAVKLLVELVAEQGTGLAEKAMVILSSLAAI 360

Query: 1208 REGRVAIVDEGGMVALVEAIEDGSVKGKEFAVLTLVQLCGDSVRNRGLLVMEGGIPPLVA 1387
             EGR AIV+EGG+ ALVEAIEDGSVKGKEFAVLTL+ LC DSVRNRGLLV EGGIPPLVA
Sbjct: 361  PEGRTAIVEEGGIPALVEAIEDGSVKGKEFAVLTLLLLCADSVRNRGLLVREGGIPPLVA 420

Query: 1388 LSQTGTLRVKHKAETLLGY 1444
            LSQTGT R KHKAETLLGY
Sbjct: 421  LSQTGTARAKHKAETLLGY 439


>ref|XP_003546191.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 457

 Score =  285 bits (729), Expect = 3e-74
 Identities = 169/286 (59%), Positives = 201/286 (70%), Gaps = 10/286 (3%)
 Frame = +3

Query: 63  MVSAEKDSSESNSNGLTQT-PHKDSTTSKPQTS-GRSMRTVRSNLFQDNHHAHAQACSQS 236
           MVS E+  S S+   L ++  +  S +SK Q   GRSMRT+RSN FQD++   + +CS +
Sbjct: 1   MVSLEESRSNSSRFPLARSYQYHSSVSSKTQRQIGRSMRTIRSNFFQDDN---SSSCSFT 57

Query: 237 FTSTCVSDNLNDSLIDL--ASRNNHNHKSVKVE--EEQLLELSQAFSDFSACSSDISGEL 404
             STC+S+NL DS++DL        N KSVK    EE+LL+LSQAFSDFSACSSDISGEL
Sbjct: 58  EKSTCLSENLTDSVVDLRLGELALRNSKSVKYSPTEEELLDLSQAFSDFSACSSDISGEL 117

Query: 405 QRLATLSS-SENDAVPADVDNEPEPEPSLGFLQR---ATEVIDSISPEDLQPTVKICVDA 572
           QRLATL S  ++D    +   EPE EP +GFLQR   +TE+I+SISPEDLQPTVK+C+D 
Sbjct: 118 QRLATLPSPKKSDFSGENEAPEPEIEPCMGFLQRENFSTEIIESISPEDLQPTVKMCIDG 177

Query: 573 LRSPSVSVXXXXXXXXXXXXXXXXXXXXXIGESGAIPALVPLLRCSDPWTQEHAVTALLN 752
           L+S SV+V                     I ESGA+P L PLLRCSDPWTQEHAVTALLN
Sbjct: 178 LQSQSVAVKRSAAAKLRLLAKNRADNRVLIAESGAVPVLAPLLRCSDPWTQEHAVTALLN 237

Query: 753 LSLLEDNKKAITNEGAVKSLVYALKTGTETSKQNAACALLNLAMVE 890
           LSL EDNK  ITN GAVKSLVY LKTGTETSKQNAACALL+LA+VE
Sbjct: 238 LSLHEDNKMLITNAGAVKSLVYVLKTGTETSKQNAACALLSLALVE 283



 Score =  235 bits (599), Expect = 3e-59
 Identities = 121/139 (87%), Positives = 131/139 (94%)
 Frame = +2

Query: 1028 GSNRGKKDALTTLYKLCSVKQNKERAVSAGAVKPLVEMVAEQGSGMAEKAMVVLNSLAGI 1207
            GS+RGKKDALTTLYKLCSV+QNKER VSAGAVKPLVE+VAEQGSGMAEKAMVVLNSLAGI
Sbjct: 305  GSSRGKKDALTTLYKLCSVRQNKERTVSAGAVKPLVELVAEQGSGMAEKAMVVLNSLAGI 364

Query: 1208 REGRVAIVDEGGMVALVEAIEDGSVKGKEFAVLTLVQLCGDSVRNRGLLVMEGGIPPLVA 1387
            +EG+ AIV+EGG+ ALVEAIEDGSVKGKEFAVLTL+QLC DSVRNRG LV EGGIPPLVA
Sbjct: 365  QEGKNAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVDSVRNRGFLVREGGIPPLVA 424

Query: 1388 LSQTGTLRVKHKAETLLGY 1444
            LSQTG++R KHKAETLL Y
Sbjct: 425  LSQTGSVRAKHKAETLLRY 443


>ref|XP_002528228.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532345|gb|EEF34143.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 467

 Score =  284 bits (726), Expect = 6e-74
 Identities = 173/298 (58%), Positives = 203/298 (68%), Gaps = 22/298 (7%)
 Frame = +3

Query: 63  MVSAEKDSSESNSNGLTQT------PHKDSTTSKPQTSGRSMRTVRSNLFQDNHHAHAQA 224
           MVS E   S +N   LT+T      P   S T   +  GRSMRT+RSN +Q+++     +
Sbjct: 1   MVSLEDSHSNANRFPLTRTNNNFYNPSSVSNTRINRHVGRSMRTIRSNFYQNDNSG---S 57

Query: 225 CSQSFT------STCVSDNLNDSLID-----LASRNNHNHKSVKVE-EEQLLELSQAFSD 368
           C  SFT      ST VS+NL DS+ID     LASRN+   KS K   +E  L++SQAFSD
Sbjct: 58  CC-SFTTAADNDSTYVSENLTDSVIDMRLGELASRNSKTEKSAKSSSDEDFLDISQAFSD 116

Query: 369 FSACSSDISGELQRLATLSSSENDAVPADVDN-EPEPEPSLGFLQR---ATEVIDSISPE 536
           FSACSSDISGELQRLA L S EN     + ++ EPEPEP LGFLQR   +TE+++SISPE
Sbjct: 117 FSACSSDISGELQRLACLPSPENAPKAENSESAEPEPEPCLGFLQRENFSTEIMESISPE 176

Query: 537 DLQPTVKICVDALRSPSVSVXXXXXXXXXXXXXXXXXXXXXIGESGAIPALVPLLRCSDP 716
           DLQP VKICVD+L+SPSV+V                     IGESGAIPAL+PLLRCSDP
Sbjct: 177 DLQPAVKICVDSLQSPSVAVKRSAAAKLRLLAKNRSDNRALIGESGAIPALIPLLRCSDP 236

Query: 717 WTQEHAVTALLNLSLLEDNKKAITNEGAVKSLVYALKTGTETSKQNAACALLNLAMVE 890
           WTQEHAVTALLNLSL E+NK  ITN GA+KSLVY LKTGT TSKQNAACALL+LA+VE
Sbjct: 237 WTQEHAVTALLNLSLHEENKGLITNNGAIKSLVYVLKTGTGTSKQNAACALLSLALVE 294



 Score =  239 bits (609), Expect = 2e-60
 Identities = 123/139 (88%), Positives = 131/139 (94%)
 Frame = +2

Query: 1028 GSNRGKKDALTTLYKLCSVKQNKERAVSAGAVKPLVEMVAEQGSGMAEKAMVVLNSLAGI 1207
            GS+RGKKDALTTLYKLCS+KQNKERAVSAGAVKPLV MVAEQG+GMAEKAMVVL+SLA I
Sbjct: 316  GSSRGKKDALTTLYKLCSIKQNKERAVSAGAVKPLVGMVAEQGTGMAEKAMVVLSSLAAI 375

Query: 1208 REGRVAIVDEGGMVALVEAIEDGSVKGKEFAVLTLVQLCGDSVRNRGLLVMEGGIPPLVA 1387
             EGR AIV+EGG+ ALVEAIEDGSVKGKEFAVLTL+QLC DSVRNRGLLV EGGIPPLVA
Sbjct: 376  EEGREAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCADSVRNRGLLVREGGIPPLVA 435

Query: 1388 LSQTGTLRVKHKAETLLGY 1444
            LSQTGT+R KHKAETLLGY
Sbjct: 436  LSQTGTVRAKHKAETLLGY 454


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