BLASTX nr result

ID: Glycyrrhiza23_contig00003268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003268
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   149   2e-34
emb|CBI17596.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   134   8e-30
gb|AFK42835.1| unknown [Lotus japonicus]                              133   2e-29
ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycin...   133   2e-29

>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/85 (90%), Positives = 79/85 (92%)
 Frame = +2

Query: 62  TG*D*ALAEGIAVKSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYT 241
           TG D A  EGIA KSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYT
Sbjct: 16  TGRDRASEEGIAAKSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYT 75

Query: 242 LSVFDSEKADKLKQSLPPGLTVQDL 316
           L VFDSEKADKLKQSLPPGL+VQD+
Sbjct: 76  LCVFDSEKADKLKQSLPPGLSVQDV 100


>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/80 (87%), Positives = 72/80 (90%)
 Frame = +2

Query: 77  ALAEGIAVKSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSVFD 256
           A + G    S MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL VFD
Sbjct: 48  AASSGSFRNSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD 107

Query: 257 SEKADKLKQSLPPGLTVQDL 316
           SEKADKLKQSLPPGL+VQDL
Sbjct: 108 SEKADKLKQSLPPGLSVQDL 127


>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = +2

Query: 110 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSVFDSEKADKLKQSL 289
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL VFDSEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 290 PPGLTVQDL 316
           PPGL+VQDL
Sbjct: 61  PPGLSVQDL 69


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +2

Query: 110 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSVFDSEKADKLKQSL 289
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL VFD+EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 290 PPGLTVQDL 316
           PPGL+VQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycine max]
          Length = 69

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +2

Query: 110 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSVFDSEKADKLKQSL 289
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL VFDSEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 290 PPGLTVQDL 316
           PPGL+VQD+
Sbjct: 61  PPGLSVQDV 69


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