BLASTX nr result

ID: Glycyrrhiza23_contig00003267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003267
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316180.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
gb|AFK35386.1| unknown [Lotus japonicus]                              137   7e-31
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   137   1e-30
ref|XP_002311257.1| predicted protein [Populus trichocarpa] gi|1...   137   1e-30
gb|AFK42835.1| unknown [Lotus japonicus]                              136   2e-30

>ref|XP_002316180.1| predicted protein [Populus trichocarpa]
           gi|224133246|ref|XP_002327996.1| predicted protein
           [Populus trichocarpa] gi|356512333|ref|XP_003524874.1|
           PREDICTED: 60S ribosomal protein L38-like [Glycine max]
           gi|356525108|ref|XP_003531169.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|356549134|ref|XP_003542952.1| PREDICTED: 60S
           ribosomal protein L38 [Glycine max]
           gi|356555492|ref|XP_003546065.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|118482000|gb|ABK92931.1| unknown [Populus
           trichocarpa] gi|118483885|gb|ABK93833.1| unknown
           [Populus trichocarpa] gi|222837405|gb|EEE75784.1|
           predicted protein [Populus trichocarpa]
           gi|222865220|gb|EEF02351.1| predicted protein [Populus
           trichocarpa] gi|255626373|gb|ACU13531.1| unknown
           [Glycine max]
          Length = 69

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -1

Query: 446 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 267
           MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 266 PPGLSVQDL 240
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>gb|AFK35386.1| unknown [Lotus japonicus]
          Length = 69

 Score =  137 bits (346), Expect = 7e-31
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = -1

Query: 446 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 267
           MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKY YTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYPYTLCVFDPEKADKLKQSL 60

Query: 266 PPGLSVQDL 240
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = -1

Query: 449 TMPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQS 270
           TMPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD EKADKLKQS
Sbjct: 31  TMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 90

Query: 269 LPPGLSVQDL 240
           LPPGLSVQD+
Sbjct: 91  LPPGLSVQDV 100


>ref|XP_002311257.1| predicted protein [Populus trichocarpa] gi|118487733|gb|ABK95690.1|
           unknown [Populus trichocarpa]
           gi|222851077|gb|EEE88624.1| predicted protein [Populus
           trichocarpa]
          Length = 69

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -1

Query: 446 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 267
           MPKQIHEIKDFLLTARRKDARSVKIKR RDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRRRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 266 PPGLSVQDL 240
           PPGLSVQ+L
Sbjct: 61  PPGLSVQEL 69


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -1

Query: 446 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 267
           MPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 266 PPGLSVQDL 240
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


Top