BLASTX nr result

ID: Glycyrrhiza23_contig00003259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003259
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43650.1| unknown [Lotus japonicus]                              220   3e-55
gb|AFK37301.1| unknown [Medicago truncatula]                          214   2e-53
ref|XP_003552674.1| PREDICTED: 60S ribosomal protein L23a-like [...   213   3e-53
gb|AFK37689.1| unknown [Lotus japonicus]                              211   1e-52
ref|XP_003597322.1| 60S ribosomal protein L23a [Medicago truncat...   210   2e-52

>gb|AFK43650.1| unknown [Lotus japonicus]
          Length = 155

 Score =  220 bits (560), Expect = 3e-55
 Identities = 111/125 (88%), Positives = 114/125 (91%)
 Frame = -1

Query: 571 SGGQLIKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAM 392
           SGG++IKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAM
Sbjct: 27  SGGKVIKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAM 86

Query: 391 KKIEDNNTLVFIVDLRXXXXXXXXXXXKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDAL 212
           KKIEDNNTLVFIVD+R           KMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDAL
Sbjct: 87  KKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDAL 146

Query: 211 DVANK 197
           DVANK
Sbjct: 147 DVANK 151


>gb|AFK37301.1| unknown [Medicago truncatula]
          Length = 154

 Score =  214 bits (545), Expect = 2e-53
 Identities = 108/123 (87%), Positives = 111/123 (90%)
 Frame = -1

Query: 565 GQLIKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKK 386
           GQ+IKKK KKIRTTVTFHRPKTL++ERNPKYPRISATPRNKLDHYQILKFPLTTESAMKK
Sbjct: 28  GQVIKKKTKKIRTTVTFHRPKTLSRERNPKYPRISATPRNKLDHYQILKFPLTTESAMKK 87

Query: 385 IEDNNTLVFIVDLRXXXXXXXXXXXKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV 206
           IEDNNTLVFIVDLR           KMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV
Sbjct: 88  IEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV 147

Query: 205 ANK 197
           ANK
Sbjct: 148 ANK 150


>ref|XP_003552674.1| PREDICTED: 60S ribosomal protein L23a-like [Glycine max]
          Length = 155

 Score =  213 bits (543), Expect = 3e-53
 Identities = 108/125 (86%), Positives = 111/125 (88%)
 Frame = -1

Query: 571 SGGQLIKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAM 392
           SGGQ+ KKKAKKIRT+VTFHRP+TL KERNPKYPRISA PRNKLDHYQILKFPLTTESAM
Sbjct: 27  SGGQVFKKKAKKIRTSVTFHRPRTLKKERNPKYPRISAPPRNKLDHYQILKFPLTTESAM 86

Query: 391 KKIEDNNTLVFIVDLRXXXXXXXXXXXKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDAL 212
           KKIEDNNTLVFIVDLR           KMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDAL
Sbjct: 87  KKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDAL 146

Query: 211 DVANK 197
           DVANK
Sbjct: 147 DVANK 151


>gb|AFK37689.1| unknown [Lotus japonicus]
          Length = 153

 Score =  211 bits (538), Expect = 1e-52
 Identities = 108/123 (87%), Positives = 108/123 (87%)
 Frame = -1

Query: 565 GQLIKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKK 386
           G  IKKK KKIRTTVTFHRPKTLTK RNPKYPRISATPRNKLDHYQILKFPLTTESAMKK
Sbjct: 27  GTTIKKKTKKIRTTVTFHRPKTLTKTRNPKYPRISATPRNKLDHYQILKFPLTTESAMKK 86

Query: 385 IEDNNTLVFIVDLRXXXXXXXXXXXKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV 206
           IEDNNTLVFIVDLR           KMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV
Sbjct: 87  IEDNNTLVFIVDLRADKKKIKAAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV 146

Query: 205 ANK 197
           ANK
Sbjct: 147 ANK 149


>ref|XP_003597322.1| 60S ribosomal protein L23a [Medicago truncatula]
           gi|217071158|gb|ACJ83939.1| unknown [Medicago
           truncatula] gi|355486370|gb|AES67573.1| 60S ribosomal
           protein L23a [Medicago truncatula]
           gi|388492382|gb|AFK34257.1| unknown [Medicago
           truncatula]
          Length = 154

 Score =  210 bits (535), Expect = 2e-52
 Identities = 106/123 (86%), Positives = 110/123 (89%)
 Frame = -1

Query: 565 GQLIKKKAKKIRTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKK 386
           G  IKKKAKKIRTTVTFHRPKTL+++RNPKYPRISATPRNKLDHYQILK+PLTTESAMKK
Sbjct: 28  GTAIKKKAKKIRTTVTFHRPKTLSRDRNPKYPRISATPRNKLDHYQILKYPLTTESAMKK 87

Query: 385 IEDNNTLVFIVDLRXXXXXXXXXXXKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV 206
           IEDNNTLVFIVDLR           KMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV
Sbjct: 88  IEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDV 147

Query: 205 ANK 197
           ANK
Sbjct: 148 ANK 150


Top