BLASTX nr result

ID: Glycyrrhiza23_contig00003248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003248
         (1987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241035.1| uncharacterized protein LOC100809876 [Glycin...   748   0.0  
ref|NP_001242370.1| uncharacterized protein LOC100778108 [Glycin...   740   0.0  
ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula] g...   729   0.0  
gb|AFK42529.1| unknown [Lotus japonicus]                              719   0.0  
ref|XP_002327990.1| predicted protein [Populus trichocarpa] gi|2...   606   e-171

>ref|NP_001241035.1| uncharacterized protein LOC100809876 [Glycine max]
            gi|255635912|gb|ACU18303.1| unknown [Glycine max]
          Length = 443

 Score =  748 bits (1932), Expect = 0.0
 Identities = 363/443 (81%), Positives = 395/443 (89%)
 Frame = -2

Query: 1860 MGLESVGDFAIQAILEKLGPQDIATVACVSKRFYSFASDDSLWIKICFRELALTQPFDHL 1681
            MGLESVGD AI  IL+KLG QDIA VACVSKRF S ASDD+LWI +CF ELALTQP DHL
Sbjct: 1    MGLESVGDLAINVILKKLGAQDIARVACVSKRFSSSASDDTLWINLCFNELALTQPLDHL 60

Query: 1680 GNPLPSFKATYQTWREAFVKYPWCLVTRVKGCWDRIKTWLSSNFPEAEATLCKGASEAEI 1501
            GNPL SFK  Y  WR AFV YPW LV RVK CWDRIKTWL++NFPEAEATLCKGA+EA+I
Sbjct: 61   GNPLSSFKECYLAWRGAFVMYPWSLVKRVKRCWDRIKTWLTNNFPEAEATLCKGATEADI 120

Query: 1500 EELENVLKVKLPLTTRILYRFHNGQEAAKADLSTNTFGSLLGLIGGYSFYSHLVNVYLLP 1321
            +ELENVLKVKLPL TRILYRFHNGQE AKAD  T+TFG  LGLIGGYSFY HLVNVYLLP
Sbjct: 121  QELENVLKVKLPLPTRILYRFHNGQEFAKADPETSTFGRSLGLIGGYSFYGHLVNVYLLP 180

Query: 1320 ISQIILETQQITRHVGFLRRSKYILVAASSTYNEKLFFLNCTNGQLYVGTRNLLTNRDMI 1141
            I QIILETQQ  R + FLRRSKY+LVAASSTY+ KLFFLNCTNGQLYVGTR+ LT RD+I
Sbjct: 181  ICQIILETQQTRRRLSFLRRSKYVLVAASSTYSRKLFFLNCTNGQLYVGTRSPLTERDII 240

Query: 1140 PCVPHNLISLHHELNSEQIQDAMLLWLEEHGRRLQHGFIKLHEDGNDKSINLFPEEDPPC 961
            PCVPH+LISLH ELNS + QDAMLLWLEEHGRRL+HGFIKLH++GN KSINLFPEE   C
Sbjct: 241  PCVPHDLISLHQELNSSEQQDAMLLWLEEHGRRLEHGFIKLHDEGNGKSINLFPEEPHIC 300

Query: 960  STAVTNGVKVRASALLVPELVDVQDDLEKYLFAYSIRMSLEPQGCIINGMFFSSCQLHWR 781
            STAVTNGVKVRASAL++PEL+D+QDDL +YLFAYSIR+SLEPQGCIINGM FSSCQLHWR
Sbjct: 301  STAVTNGVKVRASALVIPELMDLQDDLGEYLFAYSIRLSLEPQGCIINGMSFSSCQLHWR 360

Query: 780  HWIIRANDMVVSDVNGEAVIGMYPLLCPGDKEFVYQSCTPLPTPSGSIEGSFTFVPGRLA 601
            HWIIRAND+V+SDV+G+AVIG +PLL PG +EFVYQSCTPLPTPSGSIEGSFTF+PGRLA
Sbjct: 361  HWIIRANDIVISDVSGKAVIGQFPLLRPGAQEFVYQSCTPLPTPSGSIEGSFTFIPGRLA 420

Query: 600  DPKGGPFLATVARFPLQLPDYIF 532
            DPKG PFLATVARFPLQLPDYIF
Sbjct: 421  DPKGDPFLATVARFPLQLPDYIF 443


>ref|NP_001242370.1| uncharacterized protein LOC100778108 [Glycine max]
            gi|255641731|gb|ACU21136.1| unknown [Glycine max]
          Length = 443

 Score =  740 bits (1911), Expect = 0.0
 Identities = 360/443 (81%), Positives = 390/443 (88%)
 Frame = -2

Query: 1860 MGLESVGDFAIQAILEKLGPQDIATVACVSKRFYSFASDDSLWIKICFRELALTQPFDHL 1681
            MGLESVGD AI  IL KLG QD A VACVSKRF S ASDD+LWI  CF ELALTQP DHL
Sbjct: 1    MGLESVGDLAIHVILSKLGAQDTARVACVSKRFCSSASDDTLWINHCFHELALTQPLDHL 60

Query: 1680 GNPLPSFKATYQTWREAFVKYPWCLVTRVKGCWDRIKTWLSSNFPEAEATLCKGASEAEI 1501
            GNPL SFK  YQ WR AFV YPW LV RVK CWD+IKTWL++NFPEAEATLCKGA+EA+I
Sbjct: 61   GNPLSSFKECYQAWRGAFVMYPWSLVKRVKRCWDKIKTWLTNNFPEAEATLCKGATEADI 120

Query: 1500 EELENVLKVKLPLTTRILYRFHNGQEAAKADLSTNTFGSLLGLIGGYSFYSHLVNVYLLP 1321
            +ELENVLKVKLPL +RILYRFHNGQE AKAD  T T+GS LGLIGGYSFYSHLVNVYLLP
Sbjct: 121  QELENVLKVKLPLPSRILYRFHNGQEIAKADPETTTYGSSLGLIGGYSFYSHLVNVYLLP 180

Query: 1320 ISQIILETQQITRHVGFLRRSKYILVAASSTYNEKLFFLNCTNGQLYVGTRNLLTNRDMI 1141
            I QIILET+Q  RH+ FLRRSKY+LVAASSTY+ KLFFL+CTNGQLYVGTR+LLT  D+I
Sbjct: 181  IRQIILETKQTRRHLSFLRRSKYVLVAASSTYSRKLFFLSCTNGQLYVGTRDLLTEGDII 240

Query: 1140 PCVPHNLISLHHELNSEQIQDAMLLWLEEHGRRLQHGFIKLHEDGNDKSINLFPEEDPPC 961
            PCVPH+LI+LH ELN  + QDAMLLWLEEHGRRL+HGFIKLH+ GN KSINLFPEE P C
Sbjct: 241  PCVPHDLINLHQELNISEQQDAMLLWLEEHGRRLEHGFIKLHDKGNGKSINLFPEEPPLC 300

Query: 960  STAVTNGVKVRASALLVPELVDVQDDLEKYLFAYSIRMSLEPQGCIINGMFFSSCQLHWR 781
            S AVTNGVKVRASAL++PEL+D+QDDLEKYLFAYSIR+SLEPQGC INGM FSSCQLHWR
Sbjct: 301  SMAVTNGVKVRASALVIPELIDLQDDLEKYLFAYSIRLSLEPQGCTINGMSFSSCQLHWR 360

Query: 780  HWIIRANDMVVSDVNGEAVIGMYPLLCPGDKEFVYQSCTPLPTPSGSIEGSFTFVPGRLA 601
            HWIIRAND+V+SDVNGEAVIG YPLL PG +EFVYQS   LPTPSGSIEGSFTF+PGRLA
Sbjct: 361  HWIIRANDIVISDVNGEAVIGQYPLLRPGAQEFVYQSRMHLPTPSGSIEGSFTFIPGRLA 420

Query: 600  DPKGGPFLATVARFPLQLPDYIF 532
            DPKG PFLATVARFPLQLPDYIF
Sbjct: 421  DPKGDPFLATVARFPLQLPDYIF 443


>ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula]
            gi|355507878|gb|AES89020.1| F-box protein SKIP16
            [Medicago truncatula]
          Length = 443

 Score =  729 bits (1883), Expect = 0.0
 Identities = 352/443 (79%), Positives = 386/443 (87%)
 Frame = -2

Query: 1860 MGLESVGDFAIQAILEKLGPQDIATVACVSKRFYSFASDDSLWIKICFRELALTQPFDHL 1681
            M LESVGD AI  I+E L P+DIA ++CVS RF SF SDDSLW KICFREL+LTQP DHL
Sbjct: 1    MDLESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHL 60

Query: 1680 GNPLPSFKATYQTWREAFVKYPWCLVTRVKGCWDRIKTWLSSNFPEAEATLCKGASEAEI 1501
            GNP PSFK  YQTWREAFV YPW LV RVK CWD IKTWL++NFPEA+ TLC+GASE EI
Sbjct: 61   GNPTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEAKETLCEGASEVEI 120

Query: 1500 EELENVLKVKLPLTTRILYRFHNGQEAAKADLSTNTFGSLLGLIGGYSFYSHLVNVYLLP 1321
            +ELE+VL VKLPL TRILYRFHNGQE  K D  T+T    LG+IGGYSFY H VNVYLLP
Sbjct: 121  QELEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLP 180

Query: 1320 ISQIILETQQITRHVGFLRRSKYILVAASSTYNEKLFFLNCTNGQLYVGTRNLLTNRDMI 1141
            ISQ+I ETQQI+ ++GFLRRSKY+LVAASSTY EKLFFLNCTNGQLYVGTRNLLTNRD++
Sbjct: 181  ISQVIQETQQISHNLGFLRRSKYVLVAASSTYREKLFFLNCTNGQLYVGTRNLLTNRDLM 240

Query: 1140 PCVPHNLISLHHELNSEQIQDAMLLWLEEHGRRLQHGFIKLHEDGNDKSINLFPEEDPPC 961
            PCVP NLISLHHE++SE+IQDAMLLWLEEHGRRLQ GFIKL E+GN KSI+LFPEE P C
Sbjct: 241  PCVPQNLISLHHEMDSEKIQDAMLLWLEEHGRRLQRGFIKLLEEGNAKSISLFPEESPVC 300

Query: 960  STAVTNGVKVRASALLVPELVDVQDDLEKYLFAYSIRMSLEPQGCIINGMFFSSCQLHWR 781
            STAVTNGV++RASALLVPE VD+Q D EKYLF+YSIRMSL+PQGC+INGM  SSCQL+WR
Sbjct: 301  STAVTNGVQIRASALLVPEGVDLQGDREKYLFSYSIRMSLQPQGCVINGMSHSSCQLYWR 360

Query: 780  HWIIRANDMVVSDVNGEAVIGMYPLLCPGDKEFVYQSCTPLPTPSGSIEGSFTFVPGRLA 601
            HWIIRAND VVSDVNGEAVIGMYPLL PGDKEFVYQSC+PLPT SGSIEGSFTFVPGRL 
Sbjct: 361  HWIIRANDAVVSDVNGEAVIGMYPLLRPGDKEFVYQSCSPLPTSSGSIEGSFTFVPGRLV 420

Query: 600  DPKGGPFLATVARFPLQLPDYIF 532
            DP+G PFL  VA FPLQLPDYIF
Sbjct: 421  DPRGDPFLVQVAHFPLQLPDYIF 443


>gb|AFK42529.1| unknown [Lotus japonicus]
          Length = 444

 Score =  719 bits (1857), Expect = 0.0
 Identities = 351/444 (79%), Positives = 385/444 (86%), Gaps = 1/444 (0%)
 Frame = -2

Query: 1860 MGLESVGDFAIQAILEKLGPQDIATVACVSKRFYSFA-SDDSLWIKICFRELALTQPFDH 1684
            MGLE+V D AI  +L +L P+DIA VACVSK+  S A  DDSLW+ IC  EL L QP DH
Sbjct: 2    MGLETVVDLAIHDVLRRLSPEDIARVACVSKKLRSLAFDDDSLWLTICISELDLHQPLDH 61

Query: 1683 LGNPLPSFKATYQTWREAFVKYPWCLVTRVKGCWDRIKTWLSSNFPEAEATLCKGASEAE 1504
            LGNPLPSFKATYQ WREAF  YPW LV RVK CWD++KTWL +NFPEAEATLCKGASEAE
Sbjct: 62   LGNPLPSFKATYQAWREAFAMYPWSLVKRVKQCWDKLKTWLVNNFPEAEATLCKGASEAE 121

Query: 1503 IEELENVLKVKLPLTTRILYRFHNGQEAAKADLSTNTFGSLLGLIGGYSFYSHLVNVYLL 1324
            I ELENVL+VKLPL TRILYRFHNGQE A  DL ++TFGS LGLIGGYSFYSHLVNVYLL
Sbjct: 122  ILELENVLEVKLPLPTRILYRFHNGQEIANGDLESDTFGSSLGLIGGYSFYSHLVNVYLL 181

Query: 1323 PISQIILETQQITRHVGFLRRSKYILVAASSTYNEKLFFLNCTNGQLYVGTRNLLTNRDM 1144
            P+ Q+ILETQ +TRH+GFLRRSKY+LVAASST NEKLFFLNC +GQLYVGTR   T+ D+
Sbjct: 182  PLRQVILETQNLTRHLGFLRRSKYVLVAASSTQNEKLFFLNCIDGQLYVGTRTFFTSEDL 241

Query: 1143 IPCVPHNLISLHHELNSEQIQDAMLLWLEEHGRRLQHGFIKLHEDGNDKSINLFPEEDPP 964
            IPCVPHNLISL H LN+EQ QDAMLLW EEHGRRLQ GFIKLHE+GN++SINLFPEE P 
Sbjct: 242  IPCVPHNLISL-HGLNNEQQQDAMLLWFEEHGRRLQQGFIKLHEEGNNRSINLFPEEPPL 300

Query: 963  CSTAVTNGVKVRASALLVPELVDVQDDLEKYLFAYSIRMSLEPQGCIINGMFFSSCQLHW 784
            CST +TNGV+VRASAL VPEL D+QDDLEKYLFAYSIRMSL P+GCIINGM FSSCQLHW
Sbjct: 301  CSTVITNGVQVRASALFVPELSDLQDDLEKYLFAYSIRMSLHPEGCIINGMSFSSCQLHW 360

Query: 783  RHWIIRANDMVVSDVNGEAVIGMYPLLCPGDKEFVYQSCTPLPTPSGSIEGSFTFVPGRL 604
            RHWIIRAND+VVSDVNGEAVIGM+PLL PG +EFVYQSCT LPT SGS+EGSFTFVPGRL
Sbjct: 361  RHWIIRANDIVVSDVNGEAVIGMFPLLRPGAEEFVYQSCTYLPTSSGSVEGSFTFVPGRL 420

Query: 603  ADPKGGPFLATVARFPLQLPDYIF 532
            A+PKG  FLATV RFP+QLPDYIF
Sbjct: 421  ANPKGDSFLATVDRFPIQLPDYIF 444


>ref|XP_002327990.1| predicted protein [Populus trichocarpa] gi|222837399|gb|EEE75778.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  606 bits (1563), Expect = e-171
 Identities = 294/441 (66%), Positives = 351/441 (79%)
 Frame = -2

Query: 1854 LESVGDFAIQAILEKLGPQDIATVACVSKRFYSFASDDSLWIKICFRELALTQPFDHLGN 1675
            +  +GD A+  IL KLGP++ A V+CVSKRF   AS++SLW   C ++L L+ P DH GN
Sbjct: 5    INKLGDLALNIILTKLGPKETAKVSCVSKRFKDLASEESLWSLFCLQDLDLSAPLDHHGN 64

Query: 1674 PLPSFKATYQTWREAFVKYPWCLVTRVKGCWDRIKTWLSSNFPEAEATLCKGASEAEIEE 1495
            PL SFKATY+ WREAF  YPW LV RVK CWDR+K+WL++NFPE +ATL +GASE EI+E
Sbjct: 65   PLRSFKATYKLWREAFCMYPWSLVKRVKSCWDRLKSWLTTNFPEVKATLGRGASEGEIQE 124

Query: 1494 LENVLKVKLPLTTRILYRFHNGQEAAKADLSTNTFGSLLGLIGGYSFYSHLVNVYLLPIS 1315
            LE +LKVKLPL TR+LYRFH+GQ     +L+T+    LLGLIGGY FY HLVNVYLLP+ 
Sbjct: 125  LERILKVKLPLPTRLLYRFHDGQNLTGENLNTDAAACLLGLIGGYCFYDHLVNVYLLPLH 184

Query: 1314 QIILETQQITRHVGFLRRSKYILVAASSTYNEKLFFLNCTNGQLYVGTRNLLTNRDMIPC 1135
            ++ILET++I RH+     S++I+VAASS+   K FFLNC++GQLYVGT+NLLT  +MIPC
Sbjct: 185  EVILETREIVRHLDLPNGSQFIVVAASSSNIGKFFFLNCSDGQLYVGTQNLLTIGEMIPC 244

Query: 1134 VPHNLISLHHELNSEQIQDAMLLWLEEHGRRLQHGFIKLHEDGNDKSINLFPEEDPPCST 955
            VP  LIS  H+ N +Q QDAMLLWLEEHG RL +G IKL ++GN KSI+LFPEE P CST
Sbjct: 245  VPQTLISPVHDFNIDQQQDAMLLWLEEHGHRLHNGMIKLRDEGNIKSISLFPEESPLCST 304

Query: 954  AVTNGVKVRASALLVPELVDVQDDLEKYLFAYSIRMSLEPQGCIINGMFFSSCQLHWRHW 775
            AVTNGVKVRASA+ VPE VD+     KYLFAYSIRMSL P+GCIINGM FSSCQLH RHW
Sbjct: 305  AVTNGVKVRASAIFVPEAVDLS---RKYLFAYSIRMSLPPEGCIINGMRFSSCQLHLRHW 361

Query: 774  IIRANDMVVSDVNGEAVIGMYPLLCPGDKEFVYQSCTPLPTPSGSIEGSFTFVPGRLADP 595
            +I A+D V S+VN EAVIG +PLL PG+KEFVY+SCTPL +P+GS+EGSFTFVPGRL DP
Sbjct: 362  VISADDTVASNVNAEAVIGKFPLLLPGEKEFVYESCTPLRSPTGSVEGSFTFVPGRLIDP 421

Query: 594  KGGPFLATVARFPLQLPDYIF 532
            KG PF A VARFPLQLPDYIF
Sbjct: 422  KGMPFEAEVARFPLQLPDYIF 442


Top