BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003242
         (1593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   657   0.0  
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   649   0.0  
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   613   e-173
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   607   e-171
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   605   e-170

>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago truncatula]
            gi|355508303|gb|AES89445.1| Photosystem II
            stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  657 bits (1695), Expect = 0.0
 Identities = 337/401 (84%), Positives = 349/401 (87%), Gaps = 1/401 (0%)
 Frame = -3

Query: 1498 MATLQFTLSDSATLWRRXXXXXXXXXXXSKCIHS-RSRSFVVKAXXXXXXXXXXXRQFIA 1322
            MATLQFT SDS T   R              IHS R RSFVVKA            QFIA
Sbjct: 1    MATLQFTFSDSTTTLCRPLSQLPSSKSTI--IHSPRPRSFVVKASLEPSRTRR---QFIA 55

Query: 1321 ETTAISVLVPSQLAKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE 1142
            ETTAISVL+PSQLAKSEE+LSEWERVYLPIDPGVVLLDIAFVP DPNHGFLLGTRQT+LE
Sbjct: 56   ETTAISVLLPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPQDPNHGFLLGTRQTLLE 115

Query: 1141 TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS 962
            TKDGG TWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYT DAG+SWERIPLS
Sbjct: 116  TKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIPLS 175

Query: 961  AQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGA 782
            A+LPGDMVYIKAT +KSAEMVTDEGAIYVTSNRGYNW+AAVQE+VSATLNRTVSSGISGA
Sbjct: 176  AELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVSSGISGA 235

Query: 781  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRADXXX 602
            SYYTGTFNTVNRSPDGRYVAVSSRGNFY+TWEPGQA+WQPHNRAVARRIQNMGWRAD   
Sbjct: 236  SYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGWRADGGL 295

Query: 601  XXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGILLRTTNGG 422
                      LSKGTGITEEFEEIPVQSRGFGILDVGYRS +EAWAAGGSGILLRT NGG
Sbjct: 296  WLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTNNGG 355

Query: 421  KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 299
            KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG
Sbjct: 356  KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  649 bits (1675), Expect = 0.0
 Identities = 330/401 (82%), Positives = 347/401 (86%), Gaps = 1/401 (0%)
 Frame = -3

Query: 1498 MATLQFTLSDSATLWRRXXXXXXXXXXXSKCIHSRSRSFVVKAXXXXXXXXXXXRQ-FIA 1322
            MATL+ T SDS TL+R                 SR+RS +VKA           R+ FIA
Sbjct: 1    MATLRLTFSDSTTLFRPSLPSTRTF--------SRNRSLIVKASSSEDDFSRSSRRRFIA 52

Query: 1321 ETTAISVLVPSQLAKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE 1142
            ET A+SV +P   A+SE++LSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE
Sbjct: 53   ETAALSVSLPQLTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE 112

Query: 1141 TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS 962
            TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS
Sbjct: 113  TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS 172

Query: 961  AQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGA 782
            A+LPGDMVYIKATG+KSAEMVTDEGAIYVT+NRGYNWRAAVQETVSATLNRTVSSGISGA
Sbjct: 173  AELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGA 232

Query: 781  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRADXXX 602
            SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ FWQPHNRAVARRIQNMGWRAD   
Sbjct: 233  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGL 292

Query: 601  XXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGILLRTTNGG 422
                      LSKG G+TEEFEE+PVQSRGFGILDVGYRS +EAWAAGGSGILLRTTNGG
Sbjct: 293  WLLVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGG 352

Query: 421  KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 299
            KSWIRDKAADNIAANLYSVKFID+KKGFVLGNDGVLLRYLG
Sbjct: 353  KSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  613 bits (1580), Expect = e-173
 Identities = 302/350 (86%), Positives = 319/350 (91%), Gaps = 6/350 (1%)
 Frame = -3

Query: 1330 FIAETTAISVL------VPSQLAKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFL 1169
            F+A+T A   L       P Q AKSEESLSEWER+YLPIDPGVVLLDIAFVPDD NHGFL
Sbjct: 57   FVADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFL 116

Query: 1168 LGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAG 989
            LGTRQTILETKDGG TWAPRSIPSAE+EDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAG
Sbjct: 117  LGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAG 176

Query: 988  DSWERIPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNR 809
            +SWERIPLSAQLPGDMVYIKATG+KSAEMVTDEGAIYVTSN+GYNW+AAVQETVSATLNR
Sbjct: 177  ESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNR 236

Query: 808  TVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQN 629
            TVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ FWQPHNRA+ARRIQN
Sbjct: 237  TVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQN 296

Query: 628  MGWRADXXXXXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSG 449
            MGWRAD             LSKGTGI+EEFEE+PVQSRGFGILDVGYRS EEAWAAGGSG
Sbjct: 297  MGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSG 356

Query: 448  ILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 299
            +LL+TTNGG+SW RDKAADNIAANLYSVKFI+DKKGFVLGNDGVLL+YLG
Sbjct: 357  VLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  607 bits (1564), Expect = e-171
 Identities = 299/353 (84%), Positives = 320/353 (90%), Gaps = 9/353 (2%)
 Frame = -3

Query: 1330 FIAETTAIS--------VLVPSQL-AKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNH 1178
            FI++T ++S        +L P Q  A +E+SLSEWERVYLPIDPGVVLLDIAFVPDD NH
Sbjct: 42   FISQTASLSSLPLLSPLILNPQQANAAAEDSLSEWERVYLPIDPGVVLLDIAFVPDDTNH 101

Query: 1177 GFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTS 998
            GFLLGTRQTI+ETKDGGNTW  RSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYT+
Sbjct: 102  GFLLGTRQTIMETKDGGNTWVQRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTA 161

Query: 997  DAGDSWERIPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSAT 818
            D+G++WERIPLSAQLPGDMVYIKATG+KSAEMVTDEGAIY+TSNRGYNWRAAVQE+VSAT
Sbjct: 162  DSGETWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQESVSAT 221

Query: 817  LNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARR 638
            LNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNFYLTWEPGQAFWQPHNRA+ARR
Sbjct: 222  LNRTVSSGISGASYYTGTFNTVNRSPNGNYVAVSSRGNFYLTWEPGQAFWQPHNRAIARR 281

Query: 637  IQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAG 458
            IQNMGWRAD             LSKGTGI+EEFEEIPVQSRGFGILDVGYRS EEAWAAG
Sbjct: 282  IQNMGWRADGGLWLLVRGGGLYLSKGTGISEEFEEIPVQSRGFGILDVGYRSKEEAWAAG 341

Query: 457  GSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 299
            GSG+LLRTTNGGK+W RDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG
Sbjct: 342  GSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  605 bits (1559), Expect = e-170
 Identities = 304/348 (87%), Positives = 316/348 (90%), Gaps = 5/348 (1%)
 Frame = -3

Query: 1327 IAETTAISV----LVPSQLAKSEESL-SEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLG 1163
            +AET AISV    L     AKSEE L SEWERVYLPIDPGVVLLDIAFVPDD +HGFLLG
Sbjct: 57   LAETAAISVAPLILGIEPPAKSEEPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHGFLLG 116

Query: 1162 TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDS 983
            TRQTI+ETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAG+S
Sbjct: 117  TRQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGES 176

Query: 982  WERIPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV 803
            WERIPLSAQLPGD+VYIKATG+KSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV
Sbjct: 177  WERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV 236

Query: 802  SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMG 623
            SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQ +WQPHNRAVARRIQNMG
Sbjct: 237  SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMG 296

Query: 622  WRADXXXXXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGIL 443
            WRAD             LSKGTGI+E+FEEIPVQSRGFGILDVGYRS EEAWAAGGSG+L
Sbjct: 297  WRADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVL 356

Query: 442  LRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 299
            LRTTNGGK+W RDKAADNIAANLYSVKFIDD KGFVLGNDGVLLR+LG
Sbjct: 357  LRTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404