BLASTX nr result

ID: Glycyrrhiza23_contig00003142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003142
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521753.1| PREDICTED: auxin-responsive protein IAA16-li...   301   3e-79
gb|ACU19136.1| unknown [Glycine max]                                  295   1e-77
ref|XP_002319075.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
gb|AFK43673.1| unknown [Lotus japonicus]                              287   4e-75
ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ri...   285   2e-74

>ref|XP_003521753.1| PREDICTED: auxin-responsive protein IAA16-like [Glycine max]
          Length = 243

 Score =  301 bits (770), Expect = 3e-79
 Identities = 175/260 (67%), Positives = 187/260 (71%), Gaps = 2/260 (0%)
 Frame = +3

Query: 195 RYRTIDFEETELRLGLPLSGSEGLKINNAFSGGKRGFSDANXXXXXXXVDLKLNLVPXXX 374
           +Y+ I+FEETELRLGLPLSG+E LK     S GKR FSD         VDLKLNL     
Sbjct: 7   KYKMINFEETELRLGLPLSGNETLK--TTCSTGKRVFSDT-------AVDLKLNLSSTSN 57

Query: 375 XXXXXLAKEN--TAAPARSNDPAKPPAKAQVVGWPPVRSSRKNIVVNIQSRINNEADQEK 548
                L KE   TAA   +NDPAKPPAKAQVVGWPPVRS RKNIV   Q   NNE ++  
Sbjct: 58  SASSDLTKEKNITAAAPPANDPAKPPAKAQVVGWPPVRSFRKNIV---QRSNNNEGEKAA 114

Query: 549 XXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYNTYQELWDALAKMFSSFTVPK 728
                              FVKVSMDGAPYLRKVDLKLY +YQEL DALAKMFSSFT+ K
Sbjct: 115 TSSSNNVNTGAA-------FVKVSMDGAPYLRKVDLKLYKSYQELLDALAKMFSSFTIDK 167

Query: 729 CGSSQGVMKEFSFNMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWQMFVESCKRLRI 908
           CGS QG MK+F   MNESKLIDLLNGSDYVPTYEDKD DWMLVGDVPW+MFVESCKRLRI
Sbjct: 168 CGS-QG-MKDF---MNESKLIDLLNGSDYVPTYEDKDADWMLVGDVPWEMFVESCKRLRI 222

Query: 909 MKGSEAIGLAPKAVEKCKNR 968
           MKGSEAIGLAP+AVEKCKNR
Sbjct: 223 MKGSEAIGLAPRAVEKCKNR 242


>gb|ACU19136.1| unknown [Glycine max]
          Length = 243

 Score =  295 bits (756), Expect = 1e-77
 Identities = 172/260 (66%), Positives = 184/260 (70%), Gaps = 2/260 (0%)
 Frame = +3

Query: 195 RYRTIDFEETELRLGLPLSGSEGLKINNAFSGGKRGFSDANXXXXXXXVDLKLNLVPXXX 374
           +Y+ I+FEETELRLGLPLSG+E LK     S GKR FSD         VDLKLNL     
Sbjct: 7   KYKMINFEETELRLGLPLSGNETLK--TTCSTGKRVFSDT-------AVDLKLNLSSTSN 57

Query: 375 XXXXXLAKEN--TAAPARSNDPAKPPAKAQVVGWPPVRSSRKNIVVNIQSRINNEADQEK 548
                L KE   TAA   +NDPAKPPAKAQVVGWPPVRS RKNIV   Q   NNE ++  
Sbjct: 58  SASSDLTKEKNITAAAPPANDPAKPPAKAQVVGWPPVRSFRKNIV---QRSNNNEGEKAA 114

Query: 549 XXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYNTYQELWDALAKMFSSFTVPK 728
                              FVKVSMDGAPYLRKVDLKLY +YQEL DALAKMFSSFT+ K
Sbjct: 115 TSSSNNVNTGAA-------FVKVSMDGAPYLRKVDLKLYKSYQELLDALAKMFSSFTIDK 167

Query: 729 CGSSQGVMKEFSFNMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWQMFVESCKRLRI 908
           CGS QG MK+F   MNESKLID  NGSDYVPTYEDKD DWMLVGDVPW+MFVESCKRLRI
Sbjct: 168 CGS-QG-MKDF---MNESKLIDFFNGSDYVPTYEDKDADWMLVGDVPWEMFVESCKRLRI 222

Query: 909 MKGSEAIGLAPKAVEKCKNR 968
           MKG EAIGLAP+AVEKCKNR
Sbjct: 223 MKGFEAIGLAPRAVEKCKNR 242


>ref|XP_002319075.1| predicted protein [Populus trichocarpa] gi|222857451|gb|EEE94998.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  288 bits (737), Expect = 2e-75
 Identities = 164/262 (62%), Positives = 181/262 (69%), Gaps = 3/262 (1%)
 Frame = +3

Query: 195 RYRTIDFEETELRLGLPLSGSEGLKINNAFSGGKRGFSDANXXXXXXXVDLKLNLVPXXX 374
           +Y  I+FEETELRLGLP     G     A S GKRGFS+         VDLKLNL     
Sbjct: 11  KYSMINFEETELRLGLPGGIGNGNDGEVAKSNGKRGFSET--------VDLKLNLSTKES 62

Query: 375 XXXXX---LAKENTAAPARSNDPAKPPAKAQVVGWPPVRSSRKNIVVNIQSRINNEADQE 545
                   + KE T AP  S DPAKPPAKAQVVGWPP+RS RKN++  +Q   N+  ++ 
Sbjct: 63  GKGGDEEKVMKEKTVAPPASTDPAKPPAKAQVVGWPPIRSFRKNVMA-VQKNSNDNGEKS 121

Query: 546 KXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYNTYQELWDALAKMFSSFTVP 725
                               FVKVSMDGAPYLRKVDLKLY +YQEL DAL KMFSSFT+ 
Sbjct: 122 ------------GSSGTGVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG 169

Query: 726 KCGSSQGVMKEFSFNMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWQMFVESCKRLR 905
            CGS QG MK+F   MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW+MFV+SCKRLR
Sbjct: 170 NCGS-QG-MKDF---MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLR 224

Query: 906 IMKGSEAIGLAPKAVEKCKNRI 971
           IMKGSEAIGLAP+AVEKCKNRI
Sbjct: 225 IMKGSEAIGLAPRAVEKCKNRI 246


>gb|AFK43673.1| unknown [Lotus japonicus]
          Length = 266

 Score =  287 bits (735), Expect = 4e-75
 Identities = 168/266 (63%), Positives = 185/266 (69%), Gaps = 12/266 (4%)
 Frame = +3

Query: 195 RYRTIDFEETELRLGLPLSGSEGLKINNAFSGGKRGF--SDANXXXXXXXVDLKLNLVPX 368
           +Y  I+FEETELRLG+P +G  G+KI    SGGKRGF  +DAN       VDLKLNL   
Sbjct: 12  KYSMINFEETELRLGIPGAGESGIKIGGG-SGGKRGFLETDAN-------VDLKLNLSSD 63

Query: 369 XXXXXXXLA--------KENTAAPARSNDPAKPPAKAQVVGWPPVRSSRKNIVVNIQSRI 524
                  ++        KE TAA  ++NDPAKPPAKAQVVGWPPVRS RKNIV N+Q   
Sbjct: 64  LGSASSSVSSTLPPNKGKEKTAATTQANDPAKPPAKAQVVGWPPVRSFRKNIV-NVQKSN 122

Query: 525 NNEADQEKXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYNTYQELWDALAKM 704
           NNE   EK                   FVKVSMDGAPYLRKVDLKLY +YQEL DAL KM
Sbjct: 123 NNEG-AEKKVTTTTATTTAGNSAAAAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKM 181

Query: 705 FSSFTV--PKCGSSQGVMKEFSFNMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWQM 878
           FSSFT     CGS QG+MK+F   MNESKLIDLLNGSDYVPTY+DKDGDWML+GDVPW+M
Sbjct: 182 FSSFTTINGSCGS-QGMMKDF---MNESKLIDLLNGSDYVPTYQDKDGDWMLLGDVPWEM 237

Query: 879 FVESCKRLRIMKGSEAIGLAPKAVEK 956
           FVESCKRLRIMKGSEAIGLAPK   K
Sbjct: 238 FVESCKRLRIMKGSEAIGLAPKGSGK 263


>ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ricinus communis]
           gi|223529121|gb|EEF31101.1| Auxin-responsive protein
           IAA16, putative [Ricinus communis]
          Length = 257

 Score =  285 bits (728), Expect = 2e-74
 Identities = 164/267 (61%), Positives = 183/267 (68%), Gaps = 9/267 (3%)
 Frame = +3

Query: 195 RYRTIDFEETELRLGLP----LSGSEGLKINNAFSGGKRGFSDANXXXXXXXVDLKLNLV 362
           +Y  I+FEETELRLGLP    ++ SE  K+N     GKRGFS+         VDLKLNL 
Sbjct: 11  KYMMINFEETELRLGLPGGSNVNDSEFAKVN-----GKRGFSET--------VDLKLNLS 57

Query: 363 PXXXXXXXXLA-----KENTAAPARSNDPAKPPAKAQVVGWPPVRSSRKNIVVNIQSRIN 527
                    +      KE    P+ SNDPAKPPAKAQVVGWPP+RS RKN++  +Q    
Sbjct: 58  TKEPSGKDVIVGEETMKEKATVPSSSNDPAKPPAKAQVVGWPPIRSFRKNVMA-VQKNST 116

Query: 528 NEADQEKXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYNTYQELWDALAKMF 707
           +E   EK                   FVKVSMDGAPYLRKVDLKLY +YQEL DAL KMF
Sbjct: 117 DEG--EKGTATSAPAAAATSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 174

Query: 708 SSFTVPKCGSSQGVMKEFSFNMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWQMFVE 887
           SSFT+  CGS QG MK+F   MNESKLIDLLNGS+YVPTYEDKDGDWMLVGDVPW+MFV 
Sbjct: 175 SSFTIGNCGS-QG-MKDF---MNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVN 229

Query: 888 SCKRLRIMKGSEAIGLAPKAVEKCKNR 968
           SCKRLRIMKGSEAIGLAP+AVEKCKNR
Sbjct: 230 SCKRLRIMKGSEAIGLAPRAVEKCKNR 256


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