BLASTX nr result

ID: Glycyrrhiza23_contig00003093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003093
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquino...   525   e-147
ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquino...   521   e-145
gb|AFK34767.1| unknown [Medicago truncatula]                          517   e-144
gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]     496   e-138
ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquino...   488   e-136

>ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Glycine max]
          Length = 279

 Score =  525 bits (1352), Expect = e-147
 Identities = 252/282 (89%), Positives = 267/282 (94%), Gaps = 2/282 (0%)
 Frame = +1

Query: 34  MATGMLKRAVYRVSSSSSPAWRLALLRAHASEAQAQQVEPKARDTTKLKKFQIYRWNPDS 213
           MATG+LKRA  RV SS  PA++LA+LRAHASEAQAQQVEPKAR+T  LK FQIYRWNP++
Sbjct: 1   MATGLLKRAAQRVPSS--PAFKLAILRAHASEAQAQQVEPKARETPTLKTFQIYRWNPEN 58

Query: 214 PSKPELKEYEINLKECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLA 393
           PSKPELK+Y+INLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 59  PSKPELKDYQINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 118

Query: 394 CLTKIPSEVGPA--TVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEIL 567
           CLTKIPSE   A  T+TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP VPGKEIL
Sbjct: 119 CLTKIPSEKNSAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP-VPGKEIL 177

Query: 568 QSKKDRSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL 747
           QSKK+R KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL
Sbjct: 178 QSKKEREKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL 237

Query: 748 EAINDEFKLYRCHTILNCARACPKGLNPGKQIAHIKSLQPKA 873
           +AINDEFKLYRCHTILNCARACPKGLNPGKQI+HIKSLQPKA
Sbjct: 238 DAINDEFKLYRCHTILNCARACPKGLNPGKQISHIKSLQPKA 279


>ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Glycine max]
          Length = 277

 Score =  521 bits (1342), Expect = e-145
 Identities = 248/280 (88%), Positives = 263/280 (93%)
 Frame = +1

Query: 34  MATGMLKRAVYRVSSSSSPAWRLALLRAHASEAQAQQVEPKARDTTKLKKFQIYRWNPDS 213
           MATG+LKRA  R+ SS  P ++LALLRAHASEAQAQQVEPKAR T  LK FQIYRW+P++
Sbjct: 1   MATGLLKRAAQRLPSS--PGFKLALLRAHASEAQAQQVEPKARGTPTLKTFQIYRWSPEN 58

Query: 214 PSKPELKEYEINLKECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLA 393
           PSKPELK+Y+INLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 59  PSKPELKDYQINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 118

Query: 394 CLTKIPSEVGPATVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEILQS 573
           CLTKIPSE    T+TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP  PGKEILQS
Sbjct: 119 CLTKIPSEGAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPE-PGKEILQS 177

Query: 574 KKDRSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 753
           KK+R KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+A
Sbjct: 178 KKEREKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDA 237

Query: 754 INDEFKLYRCHTILNCARACPKGLNPGKQIAHIKSLQPKA 873
           INDEFKLYRCHTILNCARACPKGLNPGKQI+HIKSLQPKA
Sbjct: 238 INDEFKLYRCHTILNCARACPKGLNPGKQISHIKSLQPKA 277


>gb|AFK34767.1| unknown [Medicago truncatula]
          Length = 278

 Score =  517 bits (1331), Expect = e-144
 Identities = 247/280 (88%), Positives = 260/280 (92%)
 Frame = +1

Query: 34  MATGMLKRAVYRVSSSSSPAWRLALLRAHASEAQAQQVEPKARDTTKLKKFQIYRWNPDS 213
           MA+ MLKRA++R+SSS  P  RL LLRAHASEAQAQQ  PKARDTT LKKFQIYRWNPD+
Sbjct: 1   MASTMLKRAIHRISSS--PTSRLTLLRAHASEAQAQQASPKARDTTVLKKFQIYRWNPDT 58

Query: 214 PSKPELKEYEINLKECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLA 393
           PSKPELKE EINLKECGPMVLDALIKIKN++DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 59  PSKPELKECEINLKECGPMVLDALIKIKNDIDPSLTFRRSCREGICGSCAMNIDGCNGLA 118

Query: 394 CLTKIPSEVGPATVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEILQS 573
           CLTKIP     +T+TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+P    GKEI QS
Sbjct: 119 CLTKIPDAGMDSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSPAEEDGKEIKQS 178

Query: 574 KKDRSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 753
           KKDR+KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 179 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 238

Query: 754 INDEFKLYRCHTILNCARACPKGLNPGKQIAHIKSLQPKA 873
           INDEFKLYRCHTILNCARACP+GLNPGKQIAHIKSLQPKA
Sbjct: 239 INDEFKLYRCHTILNCARACPEGLNPGKQIAHIKSLQPKA 278


>gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]
          Length = 277

 Score =  496 bits (1277), Expect = e-138
 Identities = 238/277 (85%), Positives = 255/277 (92%)
 Frame = +1

Query: 34  MATGMLKRAVYRVSSSSSPAWRLALLRAHASEAQAQQVEPKARDTTKLKKFQIYRWNPDS 213
           MATG+L+R + RVS+SS    R   +RAHASEA+AQQVE KA  ++ LK F IYRWNPDS
Sbjct: 1   MATGILRRVLSRVSASSPS--RFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDS 58

Query: 214 PSKPELKEYEINLKECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLA 393
           PSKPEL+EY+I+LKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 59  PSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 118

Query: 394 CLTKIPSEVGPATVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEILQS 573
           CLTKIPS    +T+TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+ P VPGKEILQS
Sbjct: 119 CLTKIPSG-DSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 177

Query: 574 KKDRSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 753
           KKDR+KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 178 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 237

Query: 754 INDEFKLYRCHTILNCARACPKGLNPGKQIAHIKSLQ 864
           INDEFKLYRCHTILNCARACPKGLNPGKQI HIKSLQ
Sbjct: 238 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQ 274


>ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Cucumis sativus]
           gi|449492901|ref|XP_004159135.1| PREDICTED: succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 2,
           mitochondrial-like [Cucumis sativus]
          Length = 277

 Score =  488 bits (1257), Expect = e-136
 Identities = 235/277 (84%), Positives = 254/277 (91%)
 Frame = +1

Query: 34  MATGMLKRAVYRVSSSSSPAWRLALLRAHASEAQAQQVEPKARDTTKLKKFQIYRWNPDS 213
           MATG+L+RA+ RVS+SS    R   +RAHASEAQAQQV+ KA  ++ LK F IYRWNPDS
Sbjct: 1   MATGILRRALSRVSASSPS--RFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDS 58

Query: 214 PSKPELKEYEINLKECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLA 393
           PSKPEL+EY+I+LKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 59  PSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 118

Query: 394 CLTKIPSEVGPATVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEILQS 573
           CLTKI S    +T+TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+ P VPGKEILQS
Sbjct: 119 CLTKISSG-DSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 177

Query: 574 KKDRSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 753
           KKDR+KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+A
Sbjct: 178 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDA 237

Query: 754 INDEFKLYRCHTILNCARACPKGLNPGKQIAHIKSLQ 864
           INDEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 238 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQ 274


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