BLASTX nr result

ID: Glycyrrhiza23_contig00003079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003079
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   330   1e-88
ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicag...   325   4e-87
ref|XP_003550503.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   318   3e-85
ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2...   283   1e-74
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   278   5e-73

>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Glycine max]
          Length = 472

 Score =  330 bits (846), Expect = 1e-88
 Identities = 163/178 (91%), Positives = 169/178 (94%)
 Frame = +3

Query: 3   HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182
           HVS VEPMPSRLYHRF ICDTKRKL TLLSLIQSDAP+SGIIFV EQSEKSKKAG APST
Sbjct: 292 HVSAVEPMPSRLYHRFVICDTKRKLHTLLSLIQSDAPESGIIFVAEQSEKSKKAGKAPST 351

Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362
           SLLIDFLKTSYQG LD+LLLED MNFNSRAASLLEVRKGGGYLLVATDIAARG DLPEM+
Sbjct: 352 SLLIDFLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAARGFDLPEMS 411

Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536
           HIYNFDLP+TAIDYLHRAGRTCRKPFSD+NCTVTSIIVP+ERFVLQRYENELMF CEE
Sbjct: 412 HIYNFDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENELMFNCEE 469


>ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|217074248|gb|ACJ85484.1| unknown [Medicago
           truncatula] gi|355511449|gb|AES92591.1| DEAD-box
           ATP-dependent RNA helicase [Medicago truncatula]
           gi|388507084|gb|AFK41608.1| unknown [Medicago
           truncatula]
          Length = 480

 Score =  325 bits (832), Expect = 4e-87
 Identities = 160/178 (89%), Positives = 168/178 (94%)
 Frame = +3

Query: 3   HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182
           HVS VEPMPSRL HRF +CD KRKLQTLLSLIQSDAP+SGIIFV EQSEKSKKAGN+PST
Sbjct: 300 HVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPST 359

Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362
           SL+IDFLKTSY GSLD+LLLEDDMNFNSRAASLLEVRKGGGYLLVATD+AARGVD PEMT
Sbjct: 360 SLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMT 419

Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536
           HIYN+DLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIV +ERFVLQRYENEL FVC E
Sbjct: 420 HIYNYDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELSFVCTE 477


>ref|XP_003550503.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           58, chloroplastic-like [Glycine max]
          Length = 277

 Score =  318 bits (816), Expect = 3e-85
 Identities = 160/178 (89%), Positives = 165/178 (92%)
 Frame = +3

Query: 3   HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182
           HVS VEPMPSRL HRF I DTKRKLQTLLSLIQSDAP+ GIIFV EQSEKSKKAG APST
Sbjct: 97  HVSAVEPMPSRLXHRFIISDTKRKLQTLLSLIQSDAPEFGIIFVAEQSEKSKKAGKAPST 156

Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362
           SLLIDFLKTSYQG LD+LLLED MNFNSRAASLLEVRKGGGYLLVATDIAAR VDLPEM 
Sbjct: 157 SLLIDFLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAAREVDLPEMP 216

Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536
           HIYNFDLP+TAIDYLHRAGRTCRKPFSD+NCTVTSIIVP+ERFVLQRYENE MF CEE
Sbjct: 217 HIYNFDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENEXMFNCEE 274


>ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  283 bits (724), Expect = 1e-74
 Identities = 140/178 (78%), Positives = 156/178 (87%)
 Frame = +3

Query: 3   HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182
           HV+ +EPMP+ L HRF IC  K++ QTLLSL+QSDAP SGIIFVGEQSEKSKKAGN P T
Sbjct: 130 HVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPT 189

Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362
             L+DFLKTSY    ++LLLE+DMNFNSRAASL EVR+GGGYLLVATDIAARGVDLPE+T
Sbjct: 190 IDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEIT 249

Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536
           HIYNF+LP+TA+DYLHRAGRT RKPFSD  C VTSII+PEERFVLQRYENELMF CEE
Sbjct: 250 HIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFNCEE 307


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  278 bits (711), Expect = 5e-73
 Identities = 136/178 (76%), Positives = 152/178 (85%)
 Frame = +3

Query: 3   HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182
           HV+ +EPMPS L+HRF IC+   + QTLLSL+ SDAP+ GIIFVGEQSEKSKKAGNAPS 
Sbjct: 298 HVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSA 357

Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362
           +LLIDFLKTSY G  D+LLLE+DMNFN RAASL EVR+ GGYLL++TDIAARGVDLPE T
Sbjct: 358 TLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETT 417

Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536
           HIYNFDLP+T +DYLHRAGR  RKPFSD  C VT+II  EERFVLQRYENELMF CEE
Sbjct: 418 HIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEE 475


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