BLASTX nr result
ID: Glycyrrhiza23_contig00003079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00003079 (586 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 330 1e-88 ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicag... 325 4e-87 ref|XP_003550503.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 318 3e-85 ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2... 283 1e-74 ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 278 5e-73 >ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like [Glycine max] Length = 472 Score = 330 bits (846), Expect = 1e-88 Identities = 163/178 (91%), Positives = 169/178 (94%) Frame = +3 Query: 3 HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182 HVS VEPMPSRLYHRF ICDTKRKL TLLSLIQSDAP+SGIIFV EQSEKSKKAG APST Sbjct: 292 HVSAVEPMPSRLYHRFVICDTKRKLHTLLSLIQSDAPESGIIFVAEQSEKSKKAGKAPST 351 Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362 SLLIDFLKTSYQG LD+LLLED MNFNSRAASLLEVRKGGGYLLVATDIAARG DLPEM+ Sbjct: 352 SLLIDFLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAARGFDLPEMS 411 Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536 HIYNFDLP+TAIDYLHRAGRTCRKPFSD+NCTVTSIIVP+ERFVLQRYENELMF CEE Sbjct: 412 HIYNFDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENELMFNCEE 469 >ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|217074248|gb|ACJ85484.1| unknown [Medicago truncatula] gi|355511449|gb|AES92591.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|388507084|gb|AFK41608.1| unknown [Medicago truncatula] Length = 480 Score = 325 bits (832), Expect = 4e-87 Identities = 160/178 (89%), Positives = 168/178 (94%) Frame = +3 Query: 3 HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182 HVS VEPMPSRL HRF +CD KRKLQTLLSLIQSDAP+SGIIFV EQSEKSKKAGN+PST Sbjct: 300 HVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPST 359 Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362 SL+IDFLKTSY GSLD+LLLEDDMNFNSRAASLLEVRKGGGYLLVATD+AARGVD PEMT Sbjct: 360 SLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMT 419 Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536 HIYN+DLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIV +ERFVLQRYENEL FVC E Sbjct: 420 HIYNYDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELSFVCTE 477 >ref|XP_003550503.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like [Glycine max] Length = 277 Score = 318 bits (816), Expect = 3e-85 Identities = 160/178 (89%), Positives = 165/178 (92%) Frame = +3 Query: 3 HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182 HVS VEPMPSRL HRF I DTKRKLQTLLSLIQSDAP+ GIIFV EQSEKSKKAG APST Sbjct: 97 HVSAVEPMPSRLXHRFIISDTKRKLQTLLSLIQSDAPEFGIIFVAEQSEKSKKAGKAPST 156 Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362 SLLIDFLKTSYQG LD+LLLED MNFNSRAASLLEVRKGGGYLLVATDIAAR VDLPEM Sbjct: 157 SLLIDFLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAAREVDLPEMP 216 Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536 HIYNFDLP+TAIDYLHRAGRTCRKPFSD+NCTVTSIIVP+ERFVLQRYENE MF CEE Sbjct: 217 HIYNFDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENEXMFNCEE 274 >ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1| predicted protein [Populus trichocarpa] Length = 310 Score = 283 bits (724), Expect = 1e-74 Identities = 140/178 (78%), Positives = 156/178 (87%) Frame = +3 Query: 3 HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182 HV+ +EPMP+ L HRF IC K++ QTLLSL+QSDAP SGIIFVGEQSEKSKKAGN P T Sbjct: 130 HVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPT 189 Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362 L+DFLKTSY ++LLLE+DMNFNSRAASL EVR+GGGYLLVATDIAARGVDLPE+T Sbjct: 190 IDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEIT 249 Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536 HIYNF+LP+TA+DYLHRAGRT RKPFSD C VTSII+PEERFVLQRYENELMF CEE Sbjct: 250 HIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFNCEE 307 >ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like [Vitis vinifera] Length = 482 Score = 278 bits (711), Expect = 5e-73 Identities = 136/178 (76%), Positives = 152/178 (85%) Frame = +3 Query: 3 HVSKVEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPST 182 HV+ +EPMPS L+HRF IC+ + QTLLSL+ SDAP+ GIIFVGEQSEKSKKAGNAPS Sbjct: 298 HVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSA 357 Query: 183 SLLIDFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMT 362 +LLIDFLKTSY G D+LLLE+DMNFN RAASL EVR+ GGYLL++TDIAARGVDLPE T Sbjct: 358 TLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETT 417 Query: 363 HIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 536 HIYNFDLP+T +DYLHRAGR RKPFSD C VT+II EERFVLQRYENELMF CEE Sbjct: 418 HIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEE 475