BLASTX nr result

ID: Glycyrrhiza23_contig00003067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003067
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530683.1| PREDICTED: uncharacterized protein LOC100797...   278   9e-73
ref|NP_001241316.1| uncharacterized protein LOC100806084 [Glycin...   270   3e-70
ref|XP_003629698.1| Mediator of RNA polymerase II transcription ...   254   2e-65
gb|AFK42425.1| unknown [Lotus japonicus]                              253   3e-65
ref|XP_003629699.1| Mediator of RNA polymerase II transcription ...   249   8e-64

>ref|XP_003530683.1| PREDICTED: uncharacterized protein LOC100797517 [Glycine max]
          Length = 269

 Score =  278 bits (712), Expect = 9e-73
 Identities = 148/197 (75%), Positives = 153/197 (77%)
 Frame = +1

Query: 85  YRKTQMDSSQXXXXXXXXXXXXXXTLISQINDKXXXXXXXXXXMQKLNQVSNSIQKTLGL 264
           +RK QMDSSQ              TLISQ ND           MQKLNQVSNSIQKTLGL
Sbjct: 73  FRKLQMDSSQSAALGGNGGSGGNGTLISQNNDMAASATGADDSMQKLNQVSNSIQKTLGL 132

Query: 265 IHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDE 444
           IHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDE
Sbjct: 133 IHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDE 192

Query: 445 FTRDVINNCIAKNQITKGKTDAXXXXXXXXXXXXXQNFPDEVETFRESRAASAAELKRMA 624
           FT+DVIN+CI KNQITKGKTDA              NFPDEVETFRESRAA+AAELKR A
Sbjct: 193 FTKDVINSCIVKNQITKGKTDALKSLRKHLLEELEHNFPDEVETFRESRAAAAAELKRQA 252

Query: 625 QAQSVLPNGDVRVKAEH 675
           QAQS LPNGDVRVK+EH
Sbjct: 253 QAQSALPNGDVRVKSEH 269


>ref|NP_001241316.1| uncharacterized protein LOC100806084 [Glycine max]
           gi|255645729|gb|ACU23358.1| unknown [Glycine max]
          Length = 190

 Score =  270 bits (690), Expect = 3e-70
 Identities = 146/192 (76%), Positives = 150/192 (78%)
 Frame = +1

Query: 100 MDSSQXXXXXXXXXXXXXXTLISQINDKXXXXXXXXXXMQKLNQVSNSIQKTLGLIHQLY 279
           MDSSQ              TLISQIND           MQKLNQVSNSIQKTLGLIHQLY
Sbjct: 1   MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLY 60

Query: 280 LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDV 459
           LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFT+DV
Sbjct: 61  LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDV 120

Query: 460 INNCIAKNQITKGKTDAXXXXXXXXXXXXXQNFPDEVETFRESRAASAAELKRMAQAQSV 639
           IN+CIAKNQITKGKTDA             QNFPDEVETFRESR A+AAELKR  QAQS 
Sbjct: 121 INSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKR--QAQSA 178

Query: 640 LPNGDVRVKAEH 675
           LPNGDVRVK+EH
Sbjct: 179 LPNGDVRVKSEH 190


>ref|XP_003629698.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355523720|gb|AET04174.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 186

 Score =  254 bits (649), Expect = 2e-65
 Identities = 132/173 (76%), Positives = 140/173 (80%)
 Frame = +1

Query: 157 TLISQINDKXXXXXXXXXXMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRIN 336
           TLIS  ND           MQ L+Q+SNSI+KTLGLIHQL LTVSTFN+A QMPLLQRIN
Sbjct: 14  TLISHGNDAAASASGADDSMQNLSQISNSIEKTLGLIHQLSLTVSTFNSALQMPLLQRIN 73

Query: 337 GLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDVINNCIAKNQITKGKTDAXX 516
           GLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFT+DVINNCIAKNQITKGKTDA  
Sbjct: 74  GLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALK 133

Query: 517 XXXXXXXXXXXQNFPDEVETFRESRAASAAELKRMAQAQSVLPNGDVRVKAEH 675
                      QNFPDEVETFRE+RAA+AAELKR+AQA SVLPNGD R K EH
Sbjct: 134 DLRKHLLEELEQNFPDEVETFRENRAAAAAELKRLAQAPSVLPNGDARAKVEH 186


>gb|AFK42425.1| unknown [Lotus japonicus]
          Length = 191

 Score =  253 bits (647), Expect = 3e-65
 Identities = 136/192 (70%), Positives = 146/192 (76%)
 Frame = +1

Query: 100 MDSSQXXXXXXXXXXXXXXTLISQINDKXXXXXXXXXXMQKLNQVSNSIQKTLGLIHQLY 279
           MDSSQ              ++  Q ND           MQ+LNQVSNSIQKTLGLIHQLY
Sbjct: 1   MDSSQSAALGGNGRSGGNGSVNFQTNDTSVPAGADAS-MQELNQVSNSIQKTLGLIHQLY 59

Query: 280 LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDV 459
           LTVSTFNAAFQMPLL+RINGLV ELDNMVKLAEKCNI VPMEVVNLIDDGKNPDEFT+DV
Sbjct: 60  LTVSTFNAAFQMPLLERINGLVEELDNMVKLAEKCNIHVPMEVVNLIDDGKNPDEFTKDV 119

Query: 460 INNCIAKNQITKGKTDAXXXXXXXXXXXXXQNFPDEVETFRESRAASAAELKRMAQAQSV 639
           INNCIAKNQITKGKTD              QNFPDEVET+RE+RAA+AAELKRMAQAQ+V
Sbjct: 120 INNCIAKNQITKGKTDGLKNLRKQLLGELEQNFPDEVETYRETRAAAAAELKRMAQAQNV 179

Query: 640 LPNGDVRVKAEH 675
           L NGD RVK+EH
Sbjct: 180 LSNGDARVKSEH 191


>ref|XP_003629699.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355523721|gb|AET04175.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 154

 Score =  249 bits (635), Expect = 8e-64
 Identities = 126/154 (81%), Positives = 134/154 (87%)
 Frame = +1

Query: 214 MQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQ 393
           MQ L+Q+SNSI+KTLGLIHQL LTVSTFN+A QMPLLQRINGLVAELDNMVKLAEKCNIQ
Sbjct: 1   MQNLSQISNSIEKTLGLIHQLSLTVSTFNSALQMPLLQRINGLVAELDNMVKLAEKCNIQ 60

Query: 394 VPMEVVNLIDDGKNPDEFTRDVINNCIAKNQITKGKTDAXXXXXXXXXXXXXQNFPDEVE 573
           VPMEVVNLIDDGKNPDEFT+DVINNCIAKNQITKGKTDA             QNFPDEVE
Sbjct: 61  VPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALKDLRKHLLEELEQNFPDEVE 120

Query: 574 TFRESRAASAAELKRMAQAQSVLPNGDVRVKAEH 675
           TFRE+RAA+AAELKR+AQA SVLPNGD R K EH
Sbjct: 121 TFRENRAAAAAELKRLAQAPSVLPNGDARAKVEH 154


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