BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003063
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein C...   466   e-129
ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein C...   464   e-128
ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medi...   440   e-121
ref|XP_002312153.1| light-harvesting complex II protein Lhcb8 [P...   409   e-112
ref|XP_002526901.1| chlorophyll A/B binding protein, putative [R...   408   e-111

>ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like
            [Glycine max]
          Length = 282

 Score =  466 bits (1199), Expect = e-129
 Identities = 233/276 (84%), Positives = 244/276 (88%), Gaps = 3/276 (1%)
 Frame = -3

Query: 1141 AATSYFFGTRLNN---GTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFP 971
            AATSYFFGTRLNN    T N GRFHAL N               K+V+VKP GDRLVWFP
Sbjct: 8    AATSYFFGTRLNNVNTTTLNNGRFHALLNF-GKKKTAPQPPPKKKEVKVKPSGDRLVWFP 66

Query: 970  GAQPPEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVK 791
             A+PPEWLDG+MIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKN+AGDVIGTR E AEVK
Sbjct: 67   NAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNIAGDVIGTRVEVAEVK 126

Query: 790  PTPFQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYL 611
            PTPFQPY+EVFGIQRFRECELIHGRWAMLG+LGALAVEA TGVAWQDAGKVELVEGSSYL
Sbjct: 127  PTPFQPYSEVFGIQRFRECELIHGRWAMLGSLGALAVEALTGVAWQDAGKVELVEGSSYL 186

Query: 610  GFSLPFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQL 431
            G  LPFSLT LIWIEV+VIGYIEFQRNAELDPEKRLYPGG+FFDPLGLANDPEEK RLQL
Sbjct: 187  GLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQL 246

Query: 430  AEIKHARLAMVVFLIFGIQAAVTGKGPISFIATFNK 323
            AEIKH+RLAMVVFLIF IQAAVTGKGPISF+ATFNK
Sbjct: 247  AEIKHSRLAMVVFLIFAIQAAVTGKGPISFLATFNK 282


>ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like
            [Glycine max]
          Length = 278

 Score =  464 bits (1195), Expect = e-128
 Identities = 231/273 (84%), Positives = 243/273 (89%), Gaps = 1/273 (0%)
 Frame = -3

Query: 1138 ATSYFFGTRLNNGTS-NGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQ 962
            ATSYFFGTRLNN T+ N GRFHAL N               K+V+VKP GDRLVWFP A+
Sbjct: 8    ATSYFFGTRLNNPTTLNNGRFHALLNF--GKKKAAAPPPKKKEVKVKPSGDRLVWFPNAE 65

Query: 961  PPEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTP 782
            PPEWLDG+MIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKN+AGDVIGTR E A+VKPTP
Sbjct: 66   PPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNVAGDVIGTRVEVADVKPTP 125

Query: 781  FQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFS 602
            FQPY+EVFGIQRFRECELIHGRWAMLGALGAL VEA TGVAWQDAGKVELVEGSSYLG  
Sbjct: 126  FQPYSEVFGIQRFRECELIHGRWAMLGALGALVVEALTGVAWQDAGKVELVEGSSYLGLP 185

Query: 601  LPFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEI 422
            LPFSLT LIWIEV+VIGYIEFQRNAELDPEKRLYPGG+FFDPLGLANDPEEK RLQLAEI
Sbjct: 186  LPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEI 245

Query: 421  KHARLAMVVFLIFGIQAAVTGKGPISFIATFNK 323
            KH+RLAMVVFLIF IQAAVTGKGPISF+ATFNK
Sbjct: 246  KHSRLAMVVFLIFAIQAAVTGKGPISFLATFNK 278


>ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
            gi|355489924|gb|AES71127.1| Chlorophyll a-b binding
            protein CP29.3 [Medicago truncatula]
          Length = 278

 Score =  440 bits (1132), Expect = e-121
 Identities = 222/273 (81%), Positives = 234/273 (85%)
 Frame = -3

Query: 1141 AATSYFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQ 962
            A  S+FFGT L   TSN GR  A FN+              K VR K + D LVWFPGAQ
Sbjct: 8    ATMSHFFGTSLCKPTSNMGRVRAFFNI-GTKLKPAPKKKEVKKVR-KQESDGLVWFPGAQ 65

Query: 961  PPEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTP 782
            PPEWLDGTMIGDRGFDP G AKP EYLQFDLDSLDQNLAKNLAGD+IGTR E+ +V PTP
Sbjct: 66   PPEWLDGTMIGDRGFDPLGLAKPVEYLQFDLDSLDQNLAKNLAGDIIGTRVESTDVNPTP 125

Query: 781  FQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFS 602
            FQPYTEVFGIQRFRECE+IHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSY GFS
Sbjct: 126  FQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFS 185

Query: 601  LPFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEI 422
            LPFS++ LIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLA+DPEEKERLQLAEI
Sbjct: 186  LPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEI 245

Query: 421  KHARLAMVVFLIFGIQAAVTGKGPISFIATFNK 323
            KH+RLAMVVFLIF IQAAVTGKGPI FIATFN+
Sbjct: 246  KHSRLAMVVFLIFAIQAAVTGKGPIGFIATFNQ 278


>ref|XP_002312153.1| light-harvesting complex II protein Lhcb8 [Populus trichocarpa]
            gi|222851973|gb|EEE89520.1| light-harvesting complex II
            protein Lhcb8 [Populus trichocarpa]
          Length = 275

 Score =  409 bits (1051), Expect = e-112
 Identities = 206/271 (76%), Positives = 219/271 (80%)
 Frame = -3

Query: 1138 ATSYFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQP 959
            A SYF GTR      N G+  ALF                K    K   DRLVWFPGA P
Sbjct: 8    AASYFSGTRTQYTKQNPGKIQALFGF---GTKKSPPPPPPKKSSPKQFEDRLVWFPGASP 64

Query: 958  PEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTPF 779
            PEWLDGTM+GDRGFDPF   KPAEYLQFDLDSLDQNLAKNLAGDVIG R +  EVKPTPF
Sbjct: 65   PEWLDGTMVGDRGFDPFALGKPAEYLQFDLDSLDQNLAKNLAGDVIGVRVDATEVKPTPF 124

Query: 778  QPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFSL 599
            QPY+EVFG+QRFRECELIHGRWAMLG LGA+AVEA TGVAWQDAGKVEL+EGSSYLG  L
Sbjct: 125  QPYSEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELIEGSSYLGQPL 184

Query: 598  PFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIK 419
            PFSLT LIWIEV+V+GYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+ E LQLAEIK
Sbjct: 185  PFSLTTLIWIEVIVVGYIEFQRNAELDPEKRLYPGG-YFDPLGLASDPEKIENLQLAEIK 243

Query: 418  HARLAMVVFLIFGIQAAVTGKGPISFIATFN 326
            HARLAMV FLIFGIQAA TGKGPISF+ATFN
Sbjct: 244  HARLAMVAFLIFGIQAAFTGKGPISFVATFN 274


>ref|XP_002526901.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223533800|gb|EEF35532.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 282

 Score =  408 bits (1048), Expect = e-111
 Identities = 204/273 (74%), Positives = 221/273 (80%), Gaps = 1/273 (0%)
 Frame = -3

Query: 1138 ATSYFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRV-KPDGDRLVWFPGAQ 962
            A S+FF TR  N     G+  A F                      KP  DRLVWFPGA 
Sbjct: 11   AASHFFRTRTQNPKPKVGKIQARFGFGGFGGFGTKKSSPPPKKTAPKPVEDRLVWFPGAN 70

Query: 961  PPEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTP 782
            PPEWLDGTM+GDRGFDPFG  KPAEYLQF+LDSLDQNLAKN+AGD+IG R E  EVKPTP
Sbjct: 71   PPEWLDGTMVGDRGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGVRVEPNEVKPTP 130

Query: 781  FQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFS 602
            FQPY+EVFG+QRFRECE+IHGRWAMLG LGALAVEA TGVAWQDAGKVELVEGSSYLG  
Sbjct: 131  FQPYSEVFGLQRFRECEVIHGRWAMLGTLGALAVEALTGVAWQDAGKVELVEGSSYLGQP 190

Query: 601  LPFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEI 422
            LPFSLT LIWIEVLVIGYIEFQRNAELDPEKR+YPGG +FDPLGLA+DPE+KE LQLAEI
Sbjct: 191  LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIYPGG-YFDPLGLASDPEKKENLQLAEI 249

Query: 421  KHARLAMVVFLIFGIQAAVTGKGPISFIATFNK 323
            KH+RLAMV FLIFGIQAA TGKGPI+F+ATFN+
Sbjct: 250  KHSRLAMVAFLIFGIQAAFTGKGPIAFVATFNQ 282