BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00003059
         (2070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV65554.1| photosystem II CP47 chlorophyll apoprotein (chlor...   979   0.0  
gb|AFU94321.1| PsbB, partial (chloroplast) [Flueggea suffruticosa]    979   0.0  
gb|AFU94314.1| PsbB, partial (chloroplast) [Chrysobalanus icaco]      978   0.0  
ref|XP_003606055.1| Photosystem II CP47 chlorophyll apoprotein [...   978   0.0  
gb|ADD30623.1| photosystem II CP47 chlorophyll apoprotein [Melio...   978   0.0  

>gb|ABV65554.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Liquidambar
            styraciflua] gi|408898938|gb|AFU94311.1| PsbB, partial
            (chloroplast) [Caloncoba echinata]
          Length = 508

 Score =  979 bits (2531), Expect = 0.0
 Identities = 474/508 (93%), Positives = 477/508 (93%)
 Frame = +2

Query: 320  MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 499
            MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1    MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 500  FVIPFMTRLGIXXXXXXXXXXXXXXXXXXXXSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 679
            FVIPFMTRLGI                    SYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61   FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 680  EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS 859
            EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQS
Sbjct: 121  EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQS 180

Query: 860  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 1039
            VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 1040 SIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 1219
            SI           GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE
Sbjct: 241  SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300

Query: 1220 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 1399
            AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301  AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 1400 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 1579
            TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361  TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 1580 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 1759
            ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421  ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 1760 GIDPDLDAQVEFGAFQKLGDPTTKRQVV 1843
            GIDPDLDAQVEFGAFQKLGDPTT+RQVV
Sbjct: 481  GIDPDLDAQVEFGAFQKLGDPTTRRQVV 508


>gb|AFU94321.1| PsbB, partial (chloroplast) [Flueggea suffruticosa]
          Length = 508

 Score =  979 bits (2530), Expect = 0.0
 Identities = 473/508 (93%), Positives = 477/508 (93%)
 Frame = +2

Query: 320  MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 499
            MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1    MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 500  FVIPFMTRLGIXXXXXXXXXXXXXXXXXXXXSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 679
            FVIPFMTRLGI                    SYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61   FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 680  EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS 859
            EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGLYGPGIWVSDPYGLTG++QS
Sbjct: 121  EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKIQS 180

Query: 860  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 1039
            VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 1040 SIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 1219
            SI           GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE
Sbjct: 241  SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300

Query: 1220 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 1399
            AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301  AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 1400 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 1579
            TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361  TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 1580 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 1759
            ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421  ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 1760 GIDPDLDAQVEFGAFQKLGDPTTKRQVV 1843
            GIDPDLDAQVEFGAFQKLGDPTT+RQVV
Sbjct: 481  GIDPDLDAQVEFGAFQKLGDPTTRRQVV 508


>gb|AFU94314.1| PsbB, partial (chloroplast) [Chrysobalanus icaco]
          Length = 508

 Score =  978 bits (2529), Expect = 0.0
 Identities = 474/508 (93%), Positives = 477/508 (93%)
 Frame = +2

Query: 320  MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 499
            MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1    MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 500  FVIPFMTRLGIXXXXXXXXXXXXXXXXXXXXSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 679
            FVIPFMTRLGI                    SYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61   FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 680  EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS 859
            EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS
Sbjct: 121  EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS 180

Query: 860  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 1039
            V+PAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181  VSPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 1040 SIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 1219
            SI           GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE
Sbjct: 241  SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300

Query: 1220 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 1399
            AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301  AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 1400 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 1579
            TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361  TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 1580 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 1759
            ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421  ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 1760 GIDPDLDAQVEFGAFQKLGDPTTKRQVV 1843
            GIDPDLDAQVEFGAFQKLGDPTT+RQVV
Sbjct: 481  GIDPDLDAQVEFGAFQKLGDPTTRRQVV 508


>ref|XP_003606055.1| Photosystem II CP47 chlorophyll apoprotein [Medicago truncatula]
            gi|355507110|gb|AES88252.1| Photosystem II CP47
            chlorophyll apoprotein [Medicago truncatula]
          Length = 968

 Score =  978 bits (2529), Expect = 0.0
 Identities = 473/511 (92%), Positives = 478/511 (93%)
 Frame = +2

Query: 311  GIFMGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWR 490
            GIFMGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWR
Sbjct: 2    GIFMGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWR 61

Query: 491  QGMFVIPFMTRLGIXXXXXXXXXXXXXXXXXXXXSYEGVAGAHIVFSGLCFLAAIWHWVY 670
            QGMFVIPFMTRLGI                    SYEGVA AHIVFSGLCFLAAIWHWVY
Sbjct: 62   QGMFVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVY 121

Query: 671  WDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGR 850
            WDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTGR
Sbjct: 122  WDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGR 181

Query: 851  VQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETV 1030
            VQSVNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETV
Sbjct: 182  VQSVNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETV 241

Query: 1031 LSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQS 1210
            LSSSI           GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQS
Sbjct: 242  LSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQS 301

Query: 1211 LSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVR 1390
            LSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVR
Sbjct: 302  LSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVR 361

Query: 1391 RMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATV 1570
            RMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATV
Sbjct: 362  RMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATV 421

Query: 1571 KKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRD 1750
            KKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRD
Sbjct: 422  KKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRD 481

Query: 1751 VFAGIDPDLDAQVEFGAFQKLGDPTTKRQVV 1843
            VFAGIDPDLDAQVEFGAFQKLGDPTTK+Q +
Sbjct: 482  VFAGIDPDLDAQVEFGAFQKLGDPTTKKQEI 512


>gb|ADD30623.1| photosystem II CP47 chlorophyll apoprotein [Meliosma aff. cuneifolia
            Moore 333]
          Length = 508

 Score =  978 bits (2527), Expect = 0.0
 Identities = 473/508 (93%), Positives = 476/508 (93%)
 Frame = +2

Query: 320  MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 499
            MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1    MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 500  FVIPFMTRLGIXXXXXXXXXXXXXXXXXXXXSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 679
            FVIPFMTRLGI                    SYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61   FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 680  EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS 859
            EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQS
Sbjct: 121  EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQS 180

Query: 860  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 1039
            VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181  VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 1040 SIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 1219
            SI           GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVG GLAENQSLSE
Sbjct: 241  SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGTGLAENQSLSE 300

Query: 1220 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 1399
            AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301  AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 1400 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 1579
            TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361  TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 1580 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 1759
            ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421  ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 1760 GIDPDLDAQVEFGAFQKLGDPTTKRQVV 1843
            GIDPDLDAQVEFGAFQKLGDPTTKRQVV
Sbjct: 481  GIDPDLDAQVEFGAFQKLGDPTTKRQVV 508