BLASTX nr result

ID: Glycyrrhiza23_contig00002989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002989
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630632.1| F-box/kelch-repeat protein [Medicago truncat...   335   2e-89
ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncat...   296   9e-78
ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncat...   273   1e-70
ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|35551...   273   1e-70
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   244   3e-62

>ref|XP_003630632.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355524654|gb|AET05108.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 527

 Score =  335 bits (858), Expect = 2e-89
 Identities = 198/404 (49%), Positives = 245/404 (60%), Gaps = 14/404 (3%)
 Frame = +3

Query: 108  TGRSMKRCHDYQNDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIV-EIXXX 284
            T  S    H+ QNDTV    V +T  +                P P LP++LI+ EI   
Sbjct: 13   TSPSKTPLHNSQNDTVSTPSVPKTDTEN---------------PLPELPEELIINEILLR 57

Query: 285  XXXXXXXXXXXXSKSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSII-TQHCKIVSYP 461
                         KSWKTLISDPQF+K H + ST D       LV+S+I +  C+I++YP
Sbjct: 58   LPVRSLLQFKCVCKSWKTLISDPQFSKTHRKASTAD-----PLLVTSVIHSGKCEIIAYP 112

Query: 462  VKSLFEYPLTPSKAVSTM-MRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPI 638
            VK   E   TP ++ S    RRKYHI+ S NGLLCLYD+ Q    LWNP   LKS+ SP 
Sbjct: 113  VKPPPENLSTPVESFSIFGTRRKYHIIDSFNGLLCLYDVSQFNFTLWNPSINLKSETSPT 172

Query: 639  VVRPD-GIITYHGFGYDQVNDKYKLLVV-----VEDLNETVTKVYTFGSISWITIQNFPC 800
             V  D   +TYHGFGYD VNDKYK+LVV     V D  E VT++YTFG  SW T+ NFP 
Sbjct: 173  NVLSDYKFMTYHGFGYDHVNDKYKVLVVMRNAAVVDYREIVTRIYTFGENSWKTVPNFPG 232

Query: 801  APTRWSGKFVSGTLNWVA--KGGVSSDQWVILSFDLEKETYGEVFLPEQDGVSLRNPVLD 974
                WSGKFVSGTLNW+   + G +S Q  ILSFDL KET+ EV LP+ DG  +RN  L 
Sbjct: 233  KSHVWSGKFVSGTLNWLVNKRAGGNSSQRGILSFDLGKETFREVLLPQHDGYDVRNCGLY 292

Query: 975  VLSNCLCVCFD-SNKTHWAVWLMKKYGVAESWTKLMMIPHEKFRVSTWTPPLEPLCLSEN 1151
            VLSNCLCVCFD SNK HW VW+M +YGV ESWTKLM+IP +K         ++PL +SEN
Sbjct: 293  VLSNCLCVCFDHSNKNHWGVWMMNQYGVTESWTKLMIIPCKKLMRHL----VDPLFISEN 348

Query: 1152 GV--LLVRTMYSILVLYDSNNGSLDYTRIWSKRGLDLHVYHESL 1277
            GV  L++ ++YS  V Y+ NNG + Y +I  K G ++H+YHESL
Sbjct: 349  GVLILMMNSIYSKFVRYNLNNGRIGYPKILGKLGREMHIYHESL 392


>ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355513532|gb|AES95155.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 380

 Score =  296 bits (758), Expect = 9e-78
 Identities = 185/399 (46%), Positives = 227/399 (56%), Gaps = 16/399 (4%)
 Frame = +3

Query: 144  NDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXXS 323
            N+T    PV ETTA +               P P LP++LIV I                
Sbjct: 7    NNTDSTLPVAETTANK---------------PLPFLPEELIVIILLRLPVRSLLRFKCVC 51

Query: 324  KSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSIITQHCKIVSYPVKSLFEYPLTPSKA 503
            KSWKTL SD  FA NH   ST    +     VS+  T   K  +YP++SL E   T    
Sbjct: 52   KSWKTLFSDTHFANNHFLISTVYPQLVACESVSAYRTWEIK--TYPIESLLENSSTTVIP 109

Query: 504  VSTMMRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVVRPDGIITYHGFGY 683
            VS    ++Y ILGSCNG LCLYD +Q CVRLWNP   LKSK SP + R      Y+GFGY
Sbjct: 110  VSNTGHQRYTILGSCNGFLCLYDNYQRCVRLWNPSINLKSKSSPTIDR----FIYYGFGY 165

Query: 684  DQVNDKYKLLVVVEDLNETVTKVYTFGSISW--ITIQNFPCAPT--RWSGKFVSGTLNWV 851
            DQVN KYKLL V      T T +YTFG  S   + +++FP  P   +  GKFVSGTLNW+
Sbjct: 166  DQVNHKYKLLAVKAFSRITETMIYTFGENSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWI 225

Query: 852  AKGGVSSDQWVILSFDLEKETYGEVFLPEQDGVSLRNPVLDVLSNCLCVCFDSNKTHWAV 1031
                    +  ILSFD+EKETY +V LP Q G ++ +P L VLSNC+CVC     T W +
Sbjct: 226  VDE--RDGRATILSFDIEKETYRQVLLP-QHGYAVYSPGLYVLSNCICVCTSFLDTRWQL 282

Query: 1032 WLMKKYGVAESWTKLMMIPHEKF---RVSTWTPPLEPLCLSENG-VLLVRTMYSILVLYD 1199
            W+MKKYGVAESWTKLM IPHE      +S W P +EPL +SENG VLL+ T  S L+LY+
Sbjct: 283  WMMKKYGVAESWTKLMSIPHENLLISNISLW-PCVEPLFISENGVVLLMNTSSSQLILYN 341

Query: 1200 SNNGSLDYTRI--------WSKRGLDLHVYHESLVSPPC 1292
             N+  L + RI        + +  LDLH+YHESL+SP C
Sbjct: 342  LNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLSPQC 380


>ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355510059|gb|AES91201.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 515

 Score =  273 bits (697), Expect = 1e-70
 Identities = 177/400 (44%), Positives = 226/400 (56%), Gaps = 21/400 (5%)
 Frame = +3

Query: 141  QNDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXX 320
            QN TV  Q V E TA                     +P+++IVEI               
Sbjct: 20   QNVTVFTQSVSEITAD--------------------MPEEIIVEILLRLPVRSLLQFRCV 59

Query: 321  SKSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSIIT-QHCKIVSYPVKSLFEYP---- 485
             K WKTLISDPQFAK H+  ST      + +LVS  ++   C +VSYP+K L + P    
Sbjct: 60   CKLWKTLISDPQFAKKHVSIST-----AYPQLVSVFVSIAKCNLVSYPLKPLLDNPSAHR 114

Query: 486  LTPSKAVSTMMRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVVRPDGI-- 659
            + P+     +      I+GSCNGLLCL D +Q    LWNP  +LKSK SP ++  D    
Sbjct: 115  VEPAD-FEMIHTTSMTIIGSCNGLLCLSDFYQ--FTLWNPSIKLKSKPSPTIIAFDSFDS 171

Query: 660  --ITYHGFGYDQVNDKYKLLVVVED---LNETVTKVYTFGSISWITIQNFPCAPTRWS-- 818
                Y GFGYDQVND+YK+L VV++   L+ET T +YTFG   W TIQ FPC P+R    
Sbjct: 172  KRFLYRGFGYDQVNDRYKVLAVVQNCYNLDETKTLIYTFGGKDWTTIQKFPCDPSRCDLG 231

Query: 819  ----GKFVSGTLNWVAKGGVSSDQWVILSFDLEKETYGEVFLPEQDGVSLRNPVLDVLSN 986
                GKFVSG LNW+        + VI+ FD+EKETYGE+ LP+  G   +N VL V SN
Sbjct: 232  RLGVGKFVSGNLNWIVS------KKVIVFFDIEKETYGEMSLPQDYGD--KNTVLYVSSN 283

Query: 987  CLCVCFD-SNKTHWAVWLMKKYGVAESWTKLMMIPHEKFRVSTWTPPLEPLCLSENGVLL 1163
             + V FD SNKTHW VW+MK+YGV ESWTKLM+IP +K          + L +SE+GVLL
Sbjct: 284  RIYVSFDHSNKTHWVVWMMKEYGVVESWTKLMIIPQDKLTSPGPYCLSDALFISEHGVLL 343

Query: 1164 VRTMYSILVLYDSNN-GSLDY-TRIWSKRGLDLHVYHESL 1277
            +R  +S L +Y+ NN G LDY T I  +    LH+Y+ESL
Sbjct: 344  MRPQHSKLSVYNLNNDGGLDYCTTISGQFARYLHIYNESL 383


>ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|355510053|gb|AES91195.1| F-box
            protein [Medicago truncatula]
          Length = 607

 Score =  273 bits (697), Expect = 1e-70
 Identities = 177/400 (44%), Positives = 226/400 (56%), Gaps = 21/400 (5%)
 Frame = +3

Query: 141  QNDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXX 320
            QN TV  Q V E TA                     +P+++IVEI               
Sbjct: 20   QNVTVFTQSVSEITAD--------------------MPEEIIVEILLRLPVRSLLQFRCV 59

Query: 321  SKSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSIIT-QHCKIVSYPVKSLFEYP---- 485
             K WKTLISDPQFAK H+  ST      + +LVS  ++   C +VSYP+K L + P    
Sbjct: 60   CKLWKTLISDPQFAKKHVSIST-----AYPQLVSVFVSIAKCNLVSYPLKPLLDNPSAHR 114

Query: 486  LTPSKAVSTMMRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVVRPDGI-- 659
            + P+     +      I+GSCNGLLCL D +Q    LWNP  +LKSK SP ++  D    
Sbjct: 115  VEPAD-FEMIHTTSMTIIGSCNGLLCLSDFYQ--FTLWNPSIKLKSKPSPTIIAFDSFDS 171

Query: 660  --ITYHGFGYDQVNDKYKLLVVVED---LNETVTKVYTFGSISWITIQNFPCAPTRWS-- 818
                Y GFGYDQVND+YK+L VV++   L+ET T +YTFG   W TIQ FPC P+R    
Sbjct: 172  KRFLYRGFGYDQVNDRYKVLAVVQNCYNLDETKTLIYTFGGKDWTTIQKFPCDPSRCDLG 231

Query: 819  ----GKFVSGTLNWVAKGGVSSDQWVILSFDLEKETYGEVFLPEQDGVSLRNPVLDVLSN 986
                GKFVSG LNW+        + VI+ FD+EKETYGE+ LP+  G   +N VL V SN
Sbjct: 232  RLGVGKFVSGNLNWIVS------KKVIVFFDIEKETYGEMSLPQDYGD--KNTVLYVSSN 283

Query: 987  CLCVCFD-SNKTHWAVWLMKKYGVAESWTKLMMIPHEKFRVSTWTPPLEPLCLSENGVLL 1163
             + V FD SNKTHW VW+MK+YGV ESWTKLM+IP +K          + L +SE+GVLL
Sbjct: 284  RIYVSFDHSNKTHWVVWMMKEYGVVESWTKLMIIPQDKLTSPGPYCLSDALFISEHGVLL 343

Query: 1164 VRTMYSILVLYDSNN-GSLDY-TRIWSKRGLDLHVYHESL 1277
            +R  +S L +Y+ NN G LDY T I  +    LH+Y+ESL
Sbjct: 344  MRPQHSKLSVYNLNNDGGLDYCTTISGQFARYLHIYNESL 383


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
            gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  244 bits (624), Expect = 3e-62
 Identities = 162/392 (41%), Positives = 211/392 (53%), Gaps = 18/392 (4%)
 Frame = +3

Query: 165  PVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXXSKSWKTLI 344
            P+  ++  + +P+S    ESL   P P LPD+L+VEI                KSW +LI
Sbjct: 28   PLPPSSVPKQQPMS----ESL---PLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLI 80

Query: 345  SDPQFAKNHLRRSTEDLTMTHQRLVSSIITQHCKIVSYPVKSLFEYPL-TPSKAVSTMMR 521
            SDP F K HL  S+     TH R++ S  T    + S  + SLF  P  T    ++  ++
Sbjct: 81   SDPYFMKKHLHLSSRCTHFTHHRIILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVK 140

Query: 522  RKYH---ILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVV--RPDGIITYHGFGYD 686
             K+    I+GSCNGLLC + I   CV LWNP  R+  K  P+    RP G  T  G GYD
Sbjct: 141  NKFRHDGIVGSCNGLLC-FAIKGDCVLLWNPSIRVSKKSPPLGNNWRP-GCFTAFGLGYD 198

Query: 687  QVNDKYKLLVVVEDLNETV----TKVYTFGSISWITIQNFPCA--PTRWSGKFVSGTLNW 848
             VN+ YK++ V  D +E       KVY+  + SW  IQ+FP    P + SGKFVSGTLNW
Sbjct: 199  HVNEDYKVVAVFCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNW 258

Query: 849  VAKGGVS-SDQWVILSFDLEKETYGEVFLPEQDGVSLRNPVLDVLSNCLCVCFDSNKTHW 1025
             A   +  S  WVI+S DL KETY EV  P+ +      P L VL  CLC+ +D  KTH+
Sbjct: 259  AANHSIGPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHF 318

Query: 1026 AVWLMKKYGVAESWTKLMMIPH----EKFRVSTWTPPLEPLCLSENGVLLVRTMYSILVL 1193
             VW+MK YGV ESW KL+ IP+    E F  S       P  +SENG +L+   +  L+L
Sbjct: 319  VVWMMKDYGVRESWVKLVSIPYVPNPEDFSYS------GPYYISENGKVLLMFEFD-LIL 371

Query: 1194 YDSNNGSLDYTRIWSKRG-LDLHVYHESLVSP 1286
            YD  N S  Y +I S +G  D  VY E+LVSP
Sbjct: 372  YDPRNNSFKYPKIESGKGWFDAEVYVETLVSP 403


Top